Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for APEX2

Gene Name Gene ID Reads Annotation
APEX2 ENSDARG00000008472 7 APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]










Genes with expression patterns similar to APEX2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. APEX2 ENSDARG00000008472 7 5 1.000 1.000 1.000 1.000 - - - - 1.000 APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
2. zgc:193690 34 1.912 0.912 1.000 - - - - - - - zgc:193690
3. SLC28A2 SLC28A2 21 1.91 1.000 0.910 - - - - - - -
4. SYNDIG1 ENSDARG00000100751 165 1.88 0.880 1.000 - - - - - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
5. DBNDD1 DBNDD1 43 1.866 0.866 1.000 - - - - - - -
6. si:ch1073-185p12.2 ENSDARG00000100199 7 1.83 0.830 1.000 - - - - - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
7. FP102786.1 ENSDARG00000090551 3 1.818 - 1.000 - 0.818 - - - - - GTPase IMAP family member 8-like [Source:NCBI gene;Acc:101882698]
8. fermt3b ENSDARG00000030938 17 1.805 1.000 0.805 - - - - - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
9. si:ch211-255g12.8 ENSDARG00000069627 22 1.781 1.000 - - 0.781 - - - - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
10. snrnp35 ENSDARG00000099913 21 1.771 1.000 - - - - - - - 0.771 small nuclear ribonucleoprotein 35 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-050706-77]
11. C21H11orf82 C21H11orf82 50 1.723 0.723 1.000 - - - - - - -
12. si:ch73-338a16.3 ENSDARG00000101159 18 1.712 0.878 0.834 - - - - - - - si:ch73-338a16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-227]
13. CACNA1H CACNA1H 34 1.64 0.923 - 0.717 - - - - - -
14. si:dkey-115f9.3 7 1.576 - - 0.717 - - - - - 0.859 si:dkey-115f9.3, transcript variant X2
15. bbs4 ENSDARG00000063522 247 1.563 0.741 - - - - - - - 0.822 Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
16. tbr1a ENSDARG00000076259 341 1.561 0.849 0.712 - - - - - - - T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
17. abca4a ENSDARG00000057169 27 1.551 - 0.729 - 0.822 - - - - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
18. myca ENSDARG00000045695 582 1.44 0.722 - - 0.718 - - - - - MYC proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-990415-162]
19. si:dkey-54i3.3_2 si:dkey-54i3.3_2 59 1 - 1.000 - - - - - - -
20. CDCP1 ENSDARG00000110186 0 1 - 1.000 - - - - - - - CUB domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:24357]
21. arih1l ENSDARG00000036870, ENSDARG00000112965 82 1 - 1.000 - - - - - - - ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2395]
22. nudt6 ENSDARG00000103523 64 1 - 1.000 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 6 [Source:ZFIN;Acc:ZDB-GENE-070410-44]
23. drd2a ENSDARG00000056926 40 1 - 1.000 - - - - - - - dopamine receptor D2a [Source:ZFIN;Acc:ZDB-GENE-021119-2]
24. sema6e ENSDARG00000000189 35 1 1.000 - - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
25. HIST1H4J_2 HIST1H4J_2 12 1 - 1.000 - - - - - - -
26. pias4b ENSDARG00000042215 12 1 1.000 - - - - - - - - protein inhibitor of activated STAT, 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1298]
27. fgf9 ENSDARG00000078625 2 1 - 1.000 - - - - - - - fibroblast growth factor 9 [Source:ZFIN;Acc:ZDB-GENE-070424-238]
28. MSH4 ENSDARG00000075826 37 1 - 1.000 - - - - - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
29. si:dkey-16n15.6 ENSDARG00000095805 18 1 1.000 - - - - - - - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
30. HBQ1 HBQ1 413 1 1.000 - - - - - - - -
31. edaradd ENSDARG00000062289 66 1 - 1.000 - - - - - - - EDAR-associated death domain [Source:ZFIN;Acc:ZDB-GENE-050114-5]
32. si:dkey-4i23.7 si:dkey-4i23.7 19 1 - 1.000 - - - - - - -
33. U6_11 U6_11 0 1 - 1.000 - - - - - - -
34. BX571880.1 ENSDARG00000097533 499 1 1.000 - - - - - - - -
35. tnni3k ENSDARG00000086933 37 1 - 1.000 - - - - - - - TNNI3 interacting kinase [Source:ZFIN;Acc:ZDB-GENE-081104-399]
36. MPZL2 MPZL2 31 1 1.000 - - - - - - - -
37. zgc:173837 ENSDARG00000076949 24 1 - 1.000 - - - - - - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
38. ftr56 ENSDARG00000030954 23 1 - 1.000 - - - - - - - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
39. elk4 ENSDARG00000077092 19 1 - 1.000 - - - - - - - ELK4, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-1]
40. si:rp71-45g20.6 si:rp71-45g20.6 19 1 - 1.000 - - - - - - -
41. eno4 ENSDARG00000070598 78 1 - 1.000 - - - - - - - enolase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-677]
42. slc22a7b slc22a7b 11 1 - 1.000 - - - - - - -
43. ENSDARG00000029805 ENSDARG00000029805 4 1 1.000 - - - - - - - -
44. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1 1.000 - - - - - - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
45. rasl12 ENSDARG00000002701 66 1 - 1.000 - - - - - - - RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
46. zbtb25 ENSDARG00000042383 94 1 1.000 - - - - - - - - zinc finger and BTB domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-041001-125]
47. fgd5a ENSDARG00000088801 3 1 - 1.000 - - - - - - - FYVE, RhoGEF and PH domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-090428-3]
48. CU467646.1 ENSDARG00000075090 27 1 - 1.000 - - - - - - - mucin-5AC-like [Source:NCBI gene;Acc:110439410]
49. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 1 - 1.000 - - - - - - - carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
50. si:ch211-106h4.4 ENSDARG00000093629 9 1 - 1.000 - - - - - - - si:ch211-106h4.4 [Source:ZFIN;Acc:ZDB-GENE-070705-14]
51. echdc1 68 1 - 1.000 - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
52. derl3 ENSDARG00000033871, ENSDARG00000114961 36 1 - 1.000 - - - - - - - derlin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1324]
53. si:ch211-195i24.1 si:ch211-195i24.1 10 1 - 1.000 - - - - - - -
54. BX511034.2 ENSDARG00000071636 31 1 - 1.000 - - - - - - - novel protein similar to vertebrate amiloride-sensitive cation channel 2 neuronal (ACCN2) [Source:NCBI gene;Acc:100151078]
55. si:dkey-284p5.3 ENSDARG00000095638 4 1 1.000 - - - - - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
56. MUC5AC_1 MUC5AC_1 381 1 1.000 - - - - - - - -
57. BX571853.2 ENSDARG00000110441 21 1 - 1.000 - - - - - - -
58. FP085392.1 FP085392.1 12 1 1.000 - - - - - - - -
59. lgals3bpa ENSDARG00000037805 2 1 - 1.000 - - - - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
60. exoc8 ENSDARG00000063211 35 1 - 1.000 - - - - - - - exocyst complex component 8 [Source:ZFIN;Acc:ZDB-GENE-070410-60]
61. EVA1B EVA1B 22 1 - 1.000 - - - - - - -
62. si:ch211-281p14.2 22 1 - 1.000 - - - - - - - si:ch211-281p14.2, transcript variant X2
63. DLK1 60 1 - 1.000 - - - - - - - delta like non-canonical Notch ligand 1
64. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 1 - 1.000 - - - - - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
65. zgc:198241 ENSDARG00000076483, ENSDARG00000116081 3 1 - 1.000 - - - - - - - zgc:198241 [Source:ZFIN;Acc:ZDB-GENE-080303-14]
66. shpk ENSDARG00000002355 84 1 1.000 - - - - - - - - sedoheptulokinase [Source:ZFIN;Acc:ZDB-GENE-060526-357]
67. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1 - 1.000 - - - - - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
68. olfcg4 ENSDARG00000099773 1 1 - 1.000 - - - - - - - olfactory receptor C family, g4 [Source:ZFIN;Acc:ZDB-GENE-060503-66]
69. kcnn1a ENSDARG00000091306 95 1 - 1.000 - - - - - - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
70. il1rapl1b ENSDARG00000104853 52 1 - 1.000 - - - - - - - interleukin 1 receptor accessory protein-like 1b [Source:ZFIN;Acc:ZDB-GENE-090109-2]
71. CR759816.1 ENSDARG00000098977 27 1 - 1.000 - - - - - - -
72. mlc1 ENSDARG00000063026 29 1 - 1.000 - - - - - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:ZFIN;Acc:ZDB-GENE-050419-145]
73. zgc:171482 ENSDARG00000074415 0 1 - 1.000 - - - - - - - zgc:171482 [Source:ZFIN;Acc:ZDB-GENE-080204-84]
74. AL844567.1_1 AL844567.1_1 34 1 - 1.000 - - - - - - -
75. si:dkey-6a5.10 si:dkey-6a5.10 17 1 - 1.000 - - - - - - -
76. znf142 ENSDARG00000061373 47 1 1.000 - - - - - - - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
77. glra4b ENSDARG00000058103 0 1 - 1.000 - - - - - - - glycine receptor, alpha 4b [Source:ZFIN;Acc:ZDB-GENE-020402-2]
78. SUSD4 ENSDARG00000026335 195 1 - 1.000 - - - - - - - sushi domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-110511-1]
79. KBTBD13 ENSDARG00000076449 10 1 - 1.000 - - - - - - - kelch repeat and BTB (POZ) domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-140106-122]
80. si:dkey-56m15.8 ENSDARG00000098426 2 1 1.000 - - - - - - - - si:dkey-56m15.8 [Source:ZFIN;Acc:ZDB-GENE-110914-109]
81. lcn15 ENSDARG00000067851 140 1 1.000 - - - - - - - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
82. CABZ01081752.1 ENSDARG00000099245 84 1 - 1.000 - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100330167]
83. mkks ENSDARG00000016139 70 1 - 1.000 - - - - - - - McKusick-Kaufman syndrome [Source:ZFIN;Acc:ZDB-GENE-040426-757]
84. DNER ENSDARG00000061031 123 1 - 1.000 - - - - - - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
85. CU655961.3 ENSDARG00000106724 14 1 - 1.000 - - - - - - -
86. si:ch211-135l21.9 si:ch211-135l21.9 8 1 - 1.000 - - - - - - -
87. cabp2a ENSDARG00000052016 19 1 - 1.000 - - - - - - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
88. st8sia1 ENSDARG00000098221 34 1 - 1.000 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
89. nrros ENSDARG00000071491, ENSDARG00000112102 64 1 1.000 - - - - - - - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
90. rmnd1 ENSDARG00000027465 116 1 - 1.000 - - - - - - - required for meiotic nuclear division 1 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-21]
91. gria4a ENSDARG00000037496 88 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, AMPA 4a [Source:ZFIN;Acc:ZDB-GENE-020125-7]
92. si:dkeyp-41f9.4 ENSDARG00000092269 3 1 - 1.000 - - - - - - - si:dkeyp-41f9.4 [Source:ZFIN;Acc:ZDB-GENE-091204-320]
93. rac1l ENSDARG00000054649, ENSDARG00000096549 2 1 1.000 - - - - - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
94. cpne5a ENSDARG00000061466, ENSDARG00000111461 105 1 - 1.000 - - - - - - - copine Va [Source:ZFIN;Acc:ZDB-GENE-081105-9]
95. CABZ01060813.1 CABZ01060813.1 12 1 - 1.000 - - - - - - -
96. mst1rb ENSDARG00000004871, ENSDARG00000116535 1 1 - 1.000 - - - - - - - macrophage stimulating 1 receptor b [Source:ZFIN;Acc:ZDB-GENE-071218-3]
97. CABZ01056052.1 ENSDARG00000110748 3 1 - 1.000 - - - - - - -
98. si:dkey-220k22.3 ENSDARG00000094693 166 1 - 1.000 - - - - - - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
99. BRPF1 ENSDARG00000103665 10 1 - 1.000 - - - - - - - bromodomain and PHD finger containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-731]
100. si:ch211-272h9.5 ENSDARG00000092167 8 1 - 1.000 - - - - - - - si:ch211-272h9.5 [Source:ZFIN;Acc:ZDB-GENE-070705-167]

There are 795 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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