Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for APEX2

Gene Name Gene ID Reads Annotation
APEX2 ENSDARG00000008472 7 APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]










Genes with expression patterns similar to APEX2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. APEX2 ENSDARG00000008472 7 5 1.000 1.000 1.000 1.000 - - - - 1.000 APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
2. zgc:193690 34 1.912 0.912 1.000 - - - - - - - zgc:193690
3. SLC28A2 SLC28A2 21 1.91 1.000 0.910 - - - - - - -
4. SYNDIG1 ENSDARG00000100751 165 1.88 0.880 1.000 - - - - - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
5. DBNDD1 DBNDD1 43 1.866 0.866 1.000 - - - - - - -
6. si:ch1073-185p12.2 ENSDARG00000100199 7 1.83 0.830 1.000 - - - - - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
7. FP102786.1 ENSDARG00000090551 3 1.818 - 1.000 - 0.818 - - - - - GTPase IMAP family member 8-like [Source:NCBI gene;Acc:101882698]
8. fermt3b ENSDARG00000030938 17 1.805 1.000 0.805 - - - - - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
9. si:ch211-255g12.8 ENSDARG00000069627 22 1.781 1.000 - - 0.781 - - - - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
10. snrnp35 ENSDARG00000099913 21 1.771 1.000 - - - - - - - 0.771 small nuclear ribonucleoprotein 35 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-050706-77]
11. C21H11orf82 C21H11orf82 50 1.723 0.723 1.000 - - - - - - -
12. si:ch73-338a16.3 ENSDARG00000101159 18 1.712 0.878 0.834 - - - - - - - si:ch73-338a16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-227]
13. CACNA1H CACNA1H 34 1.64 0.923 - 0.717 - - - - - -
14. si:dkey-115f9.3 7 1.576 - - 0.717 - - - - - 0.859 si:dkey-115f9.3, transcript variant X2
15. bbs4 ENSDARG00000063522 247 1.563 0.741 - - - - - - - 0.822 Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
16. tbr1a ENSDARG00000076259 341 1.561 0.849 0.712 - - - - - - - T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
17. abca4a ENSDARG00000057169 27 1.551 - 0.729 - 0.822 - - - - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
18. myca ENSDARG00000045695 582 1.44 0.722 - - 0.718 - - - - - MYC proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-990415-162]
19. BX323793.2 BX323793.2 61 1 - 1.000 - - - - - - -
20. U11 U11 11 1 - 1.000 - - - - - - -
21. si:ch211-186e20.2 ENSDARG00000074712 0 1 - 1.000 - - - - - - - si:ch211-186e20.2 [Source:ZFIN;Acc:ZDB-GENE-110407-8]
22. sdhda ENSDARG00000055712 50 1 - 1.000 - - - - - - - succinate dehydrogenase complex, subunit D, integral membrane protein a [Source:ZFIN;Acc:ZDB-GENE-040718-192]
23. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 1 - 1.000 - - - - - - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
24. SBK3_1 SBK3_1 21 1 1.000 - - - - - - - -
25. slc2a5 ENSDARG00000077875 5 1 - 1.000 - - - - - - - solute carrier family 2 (facilitated glucose/fructose transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060222-2]
26. DLK1 60 1 - 1.000 - - - - - - - delta like non-canonical Notch ligand 1
27. si:ch211-162i8.2 ENSDARG00000096041 4 1 - 1.000 - - - - - - - si:ch211-162i8.2 [Source:ZFIN;Acc:ZDB-GENE-110913-56]
28. CR759816.1 ENSDARG00000098977 27 1 - 1.000 - - - - - - -
29. si:dkey-6a5.10 si:dkey-6a5.10 17 1 - 1.000 - - - - - - -
30. MPZL2 MPZL2 31 1 1.000 - - - - - - - -
31. AL844567.1_1 AL844567.1_1 34 1 - 1.000 - - - - - - -
32. si:dkey-169l5.3 si:dkey-169l5.3 239 1 - 1.000 - - - - - - -
33. BX548047.2 ENSDARG00000115500 17 1 - 1.000 - - - - - - -
34. si:ch73-289h5.1 si:ch73-289h5.1 2 1 - 1.000 - - - - - - -
35. SFT2D2_1 SFT2D2_1 219 1 1.000 - - - - - - - -
36. PEG3_19 PEG3_19 29 1 - 1.000 - - - - - - -
37. matn3a ENSDARG00000069245 2410 1 - 1.000 - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
38. CABZ01117437.1 CABZ01117437.1 11 1 - 1.000 - - - - - - -
39. mir21-2 18 1 - 1.000 - - - - - - - microRNA 21-2
40. prkcba ENSDARG00000008723, ENSDARG00000116813 30 1 - 1.000 - - - - - - - protein kinase C, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1354]
41. si:ch211-218h8.1 ENSDARG00000091026 0 1 - 1.000 - - - - - - - si:ch211-218h8.1 [Source:ZFIN;Acc:ZDB-GENE-081103-16]
42. si:dkey-11f14.2 si:dkey-11f14.2 2 1 - 1.000 - - - - - - -
43. fam213ab 1 1 - 1.000 - - - - - - - family with sequence similarity 213, member Ab
44. si:ch211-268b13.3 si:ch211-268b13.3 28 1 - 1.000 - - - - - - -
45. slc43a3a ENSDARG00000059682 27 1 - 1.000 - - - - - - - solute carrier family 43, member 3a [Source:ZFIN;Acc:ZDB-GENE-110208-8]
46. ankrd45 ENSDARG00000011326 62 1 - 1.000 - - - - - - - ankyrin repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-050522-311]
47. vax2 ENSDARG00000058702 175 1 - 1.000 - - - - - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
48. si:ch1073-464p5.5 ENSDARG00000079544 5 1 - 1.000 - - - - - - - si:ch1073-464p5.5 [Source:ZFIN;Acc:ZDB-GENE-091116-35]
49. rxrga ENSDARG00000005593 342 1 1.000 - - - - - - - - retinoid x receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-36]
50. si:ch211-262h13.4 si:ch211-262h13.4 3 1 - 1.000 - - - - - - -
51. si:ch73-59c19.1 ENSDARG00000091909 64 1 - 1.000 - - - - - - - si:ch73-59c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-247]
52. CABZ01054394.1 ENSDARG00000090942 12 1 - 1.000 - - - - - - - gastrula zinc finger protein XlCGF26.1-like [Source:NCBI gene;Acc:101885996]
53. lgals3bpa ENSDARG00000037805 2 1 - 1.000 - - - - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
54. C8H1orf173 C8H1orf173 10 1 - 1.000 - - - - - - -
55. si:dkey-284p5.3 ENSDARG00000095638 4 1 1.000 - - - - - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
56. glra4b ENSDARG00000058103 0 1 - 1.000 - - - - - - - glycine receptor, alpha 4b [Source:ZFIN;Acc:ZDB-GENE-020402-2]
57. si:ch211-281p14.2 22 1 - 1.000 - - - - - - - si:ch211-281p14.2, transcript variant X2
58. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1 1.000 - - - - - - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
59. si:dkey-30j10.5 ENSDARG00000093186 13 1 1.000 - - - - - - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
60. chia.3 ENSDARG00000009612 14 1 - 1.000 - - - - - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
61. sema6e ENSDARG00000000189 35 1 1.000 - - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
62. rmnd1 ENSDARG00000027465 116 1 - 1.000 - - - - - - - required for meiotic nuclear division 1 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-21]
63. nudt6 ENSDARG00000103523 64 1 - 1.000 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 6 [Source:ZFIN;Acc:ZDB-GENE-070410-44]
64. si:ch1073-170o4.1 ENSDARG00000092780 18 1 - 1.000 - - - - - - - si:ch1073-170o4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7012]
65. dhcr24 ENSDARG00000013236 61 1 - 1.000 - - - - - - - 24-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-041212-73]
66. echdc1 68 1 - 1.000 - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
67. lcn15 ENSDARG00000067851 140 1 1.000 - - - - - - - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
68. CR854963.2 ENSDARG00000114235 82 1 - 1.000 - - - - - - -
69. ZNF337_23 ZNF337_23 39 1 - 1.000 - - - - - - -
70. epm2a ENSDARG00000059044 10 1 1.000 - - - - - - - - epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
71. znf142 ENSDARG00000061373 47 1 1.000 - - - - - - - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
72. asf1ba_1 ENSDARG00000101037 3 1 - 1.000 - - - - - - - anti-silencing function 1Ba histone chaperone [Source:ZFIN;Acc:ZDB-GENE-031118-197]
73. si:ch211-272h9.5 ENSDARG00000092167 8 1 - 1.000 - - - - - - - si:ch211-272h9.5 [Source:ZFIN;Acc:ZDB-GENE-070705-167]
74. BX571853.2 ENSDARG00000110441 21 1 - 1.000 - - - - - - -
75. FP325123.1_1 ENSDARG00000105359 38 1 - 1.000 - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
76. mpx ENSDARG00000019521 562 1 1.000 - - - - - - - - myeloid-specific peroxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9460]
77. CR936975.1 ENSDARG00000096862 22 1 - 1.000 - - - - - - -
78. C1GALT1_1 C1GALT1_1 1 1 - 1.000 - - - - - - -
79. si:dkey-88e10.2 si:dkey-88e10.2 7 1 - 1.000 - - - - - - -
80. slc12a2 ENSDARG00000104573 59 1 - 1.000 - - - - - - - solute carrier family 12 (sodium/potassium/chloride transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040625-53]
81. CT583679.2 CT583679.2 10 1 1.000 - - - - - - - -
82. MUC5AC_1 MUC5AC_1 381 1 1.000 - - - - - - - -
83. si:ch211-155e24.5 si:ch211-155e24.5 2 1 - 1.000 - - - - - - -
84. npffr2.1 npffr2.1 60 1 - 1.000 - - - - - - -
85. si:dkey-220k22.3 ENSDARG00000094693 166 1 - 1.000 - - - - - - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
86. BX571880.1 ENSDARG00000097533 499 1 1.000 - - - - - - - -
87. FP102192.1 ENSDARG00000101104 32 1 1.000 - - - - - - - - protein FAM111A-like [Source:NCBI gene;Acc:101886648]
88. olfcg4 ENSDARG00000099773 1 1 - 1.000 - - - - - - - olfactory receptor C family, g4 [Source:ZFIN;Acc:ZDB-GENE-060503-66]
89. PBLD ENSDARG00000016704, ENSDARG00000111119, ENSDARG00000111431 30 1 1.000 - - - - - - - - phenazine biosynthesis like protein domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-217]
90. si:ch211-15o14.2 si:ch211-15o14.2 6 1 - 1.000 - - - - - - -
91. btk ENSDARG00000004433 106 1 1.000 - - - - - - - - Bruton agammaglobulinemia tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070531-1]
92. gria4a ENSDARG00000037496 88 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, AMPA 4a [Source:ZFIN;Acc:ZDB-GENE-020125-7]
93. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 1 - 1.000 - - - - - - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
94. slc22a7b slc22a7b 11 1 - 1.000 - - - - - - -
95. CU013533.1 CU013533.1 108 1 1.000 - - - - - - - -
96. st6galnac1.1 ENSDARG00000043814 95 1 - 1.000 - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041014-160]
97. zgc:171482 ENSDARG00000074415 0 1 - 1.000 - - - - - - - zgc:171482 [Source:ZFIN;Acc:ZDB-GENE-080204-84]
98. GABRR1 ENSDARG00000043902 71 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
99. cdkn1bb_1 ENSDARG00000054271 5 1 1.000 - - - - - - - - cyclin-dependent kinase inhibitor 1Bb [Source:ZFIN;Acc:ZDB-GENE-030521-13]
100. U6_11 U6_11 0 1 - 1.000 - - - - - - -

There are 795 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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