Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for APEX2

Gene Name Gene ID Reads Annotation
APEX2 ENSDARG00000008472 7 APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]










Genes with expression patterns similar to APEX2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. APEX2 ENSDARG00000008472 7 5 1.000 1.000 1.000 1.000 - - - - 1.000 APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
2. zgc:193690 34 1.912 0.912 1.000 - - - - - - - zgc:193690
3. SLC28A2 SLC28A2 21 1.91 1.000 0.910 - - - - - - -
4. SYNDIG1 ENSDARG00000100751 165 1.88 0.880 1.000 - - - - - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
5. DBNDD1 DBNDD1 43 1.866 0.866 1.000 - - - - - - -
6. si:ch1073-185p12.2 ENSDARG00000100199 7 1.83 0.830 1.000 - - - - - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
7. FP102786.1 ENSDARG00000090551 3 1.818 - 1.000 - 0.818 - - - - - GTPase IMAP family member 8-like [Source:NCBI gene;Acc:101882698]
8. fermt3b ENSDARG00000030938 17 1.805 1.000 0.805 - - - - - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
9. si:ch211-255g12.8 ENSDARG00000069627 22 1.781 1.000 - - 0.781 - - - - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
10. snrnp35 ENSDARG00000099913 21 1.771 1.000 - - - - - - - 0.771 small nuclear ribonucleoprotein 35 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-050706-77]
11. C21H11orf82 C21H11orf82 50 1.723 0.723 1.000 - - - - - - -
12. si:ch73-338a16.3 ENSDARG00000101159 18 1.712 0.878 0.834 - - - - - - - si:ch73-338a16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-227]
13. CACNA1H CACNA1H 34 1.64 0.923 - 0.717 - - - - - -
14. si:dkey-115f9.3 7 1.576 - - 0.717 - - - - - 0.859 si:dkey-115f9.3, transcript variant X2
15. bbs4 ENSDARG00000063522 247 1.563 0.741 - - - - - - - 0.822 Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
16. tbr1a ENSDARG00000076259 341 1.561 0.849 0.712 - - - - - - - T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
17. abca4a ENSDARG00000057169 27 1.551 - 0.729 - 0.822 - - - - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
18. myca ENSDARG00000045695 582 1.44 0.722 - - 0.718 - - - - - MYC proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-990415-162]
19. chrnb1l ENSDARG00000022532, ENSDARG00000113943, ENSDARG00000116196 3 1 - 1.000 - - - - - - - cholinergic receptor, nicotinic, beta 1 (muscle) like [Source:ZFIN;Acc:ZDB-GENE-060811-1]
20. CABZ01112331.1 CABZ01112331.1 9 1 - 1.000 - - - - - - -
21. FP102192.1 ENSDARG00000101104 32 1 1.000 - - - - - - - - protein FAM111A-like [Source:NCBI gene;Acc:101886648]
22. ENSDARG00000029805 ENSDARG00000029805 4 1 1.000 - - - - - - - -
23. TTBK1 TTBK1 120 1 - 1.000 - - - - - - -
24. FP085392.1 FP085392.1 12 1 1.000 - - - - - - - -
25. slc18b1 ENSDARG00000044047 7 1 - 1.000 - - - - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
26. itln1 ENSDARG00000007534 8 1 - 1.000 - - - - - - - intelectin 1 [Source:ZFIN;Acc:ZDB-GENE-060929-564]
27. fam213ab 1 1 - 1.000 - - - - - - - family with sequence similarity 213, member Ab
28. im:7151068 im:7151068 2 1 - 1.000 - - - - - - -
29. exoc8 ENSDARG00000063211 35 1 - 1.000 - - - - - - - exocyst complex component 8 [Source:ZFIN;Acc:ZDB-GENE-070410-60]
30. si:dkeyp-82a1.2 ENSDARG00000094192 2 1 - 1.000 - - - - - - - si:dkeyp-82a1.2 [Source:ZFIN;Acc:ZDB-GENE-081104-475]
31. si:dkey-58b18.10 ENSDARG00000109911, ENSDARG00000113007, ENSDARG00000116868 4 1 1.000 - - - - - - - - si:dkey-58b18.10 [Source:ZFIN;Acc:ZDB-GENE-070912-560]
32. gpr39 ENSDARG00000102888 46 1 1.000 - - - - - - - - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]
33. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 1.000 - - - - - - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
34. si:dkey-169l5.3 si:dkey-169l5.3 239 1 - 1.000 - - - - - - -
35. ptger4a ENSDARG00000059236 13 1 - 1.000 - - - - - - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
36. si:dkey-202i12.5 si:dkey-202i12.5 20 1 1.000 - - - - - - - -
37. si:ch211-73m21.2 si:ch211-73m21.2 5 1 1.000 - - - - - - - -
38. GPBAR1 ENSDARG00000023302 2 1 1.000 - - - - - - - - G protein-coupled bile acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120315-1]
39. CR753817.1 ENSDARG00000110927 26 1 - 1.000 - - - - - - -
40. NLRC5 ENSDARG00000024631 11 1 - 1.000 - - - - - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
41. CABZ01056052.1 ENSDARG00000110748 3 1 - 1.000 - - - - - - -
42. PPP2R5B ENSDARG00000054931 213 1 - 1.000 - - - - - - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
43. shpk ENSDARG00000002355 84 1 1.000 - - - - - - - - sedoheptulokinase [Source:ZFIN;Acc:ZDB-GENE-060526-357]
44. BX548047.2 ENSDARG00000115500 17 1 - 1.000 - - - - - - -
45. eno4 ENSDARG00000070598 78 1 - 1.000 - - - - - - - enolase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-677]
46. BIN3 ENSDARG00000099651 5 1 - 1.000 - - - - - - - bridging integrator 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2696]
47. CABZ01080224.1 CABZ01080224.1 1 1 1.000 - - - - - - - -
48. si:ch211-106g4.2 si:ch211-106g4.2 6 1 1.000 - - - - - - - -
49. CU896555.1 CU896555.1 27 1 1.000 - - - - - - - -
50. lrrn3 lrrn3 137 1 - 1.000 - - - - - - -
51. KLF10 1 1 - 1.000 - - - - - - - Kruppel-like factor 10
52. KBTBD11 ENSDARG00000104958 8 1 - 1.000 - - - - - - - kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]
53. si:ch211-208f21.1 si:ch211-208f21.1 1 1 - 1.000 - - - - - - -
54. st8sia1 ENSDARG00000098221 34 1 - 1.000 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
55. s100t ENSDARG00000055589 453 1 - 1.000 - - - - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
56. wu:fb37b09 wu:fb37b09 10685 1 - 1.000 - - - - - - -
57. si:dkey-16n15.6 ENSDARG00000095805 18 1 1.000 - - - - - - - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
58. sftpba ENSDARG00000094708 2 1 - 1.000 - - - - - - - surfactant protein Ba [Source:ZFIN;Acc:ZDB-GENE-091204-378]
59. nudt6 ENSDARG00000103523 64 1 - 1.000 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 6 [Source:ZFIN;Acc:ZDB-GENE-070410-44]
60. mir30b 4 1 - 1.000 - - - - - - - microRNA 30b
61. FP085391.2 FP085391.2 85 1 - 1.000 - - - - - - -
62. CABZ01087025.1 ENSDARG00000117232 10 1 - 1.000 - - - - - - -
63. SMCHD1 ENSDARG00000104374 2 1 1.000 - - - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
64. slc12a2 ENSDARG00000104573 59 1 - 1.000 - - - - - - - solute carrier family 12 (sodium/potassium/chloride transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040625-53]
65. si:dkey-54i3.3_2 si:dkey-54i3.3_2 59 1 - 1.000 - - - - - - -
66. polg ENSDARG00000060951 33 1 - 1.000 - - - - - - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]
67. VMAC ENSDARG00000110997 2 1 - 1.000 - - - - - - - vimentin type intermediate filament associated coiled-coil protein [Source:HGNC Symbol;Acc:HGNC:33803]
68. mpz ENSDARG00000038609 1740 1 - 1.000 - - - - - - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
69. BX571880.1 ENSDARG00000097533 499 1 1.000 - - - - - - - -
70. CABZ01038708.1 CABZ01038708.1 28 1 - 1.000 - - - - - - -
71. CU013533.1 CU013533.1 108 1 1.000 - - - - - - - -
72. rcv1 rcv1 77 1 - 1.000 - - - - - - -
73. si:ch211-120c15.3 ENSDARG00000101807 19 1 - 1.000 - - - - - - - si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
74. HIST1H2BA_1 ENSDARG00000116654 37 1 1.000 - - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
75. si:dkey-11f14.2 si:dkey-11f14.2 2 1 - 1.000 - - - - - - -
76. drd2a ENSDARG00000056926 40 1 - 1.000 - - - - - - - dopamine receptor D2a [Source:ZFIN;Acc:ZDB-GENE-021119-2]
77. mkks ENSDARG00000016139 70 1 - 1.000 - - - - - - - McKusick-Kaufman syndrome [Source:ZFIN;Acc:ZDB-GENE-040426-757]
78. cart1 ENSDARG00000070930 46 1 1.000 - - - - - - - - cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]
79. CCNO 21 1 - 1.000 - - - - - - - cyclin O
80. nrros ENSDARG00000071491, ENSDARG00000112102 64 1 1.000 - - - - - - - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
81. vax2 ENSDARG00000058702 175 1 - 1.000 - - - - - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
82. si:ch211-272h9.5 ENSDARG00000092167 8 1 - 1.000 - - - - - - - si:ch211-272h9.5 [Source:ZFIN;Acc:ZDB-GENE-070705-167]
83. fgd5a ENSDARG00000088801 3 1 - 1.000 - - - - - - - FYVE, RhoGEF and PH domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-090428-3]
84. si:ch73-289h5.1 si:ch73-289h5.1 2 1 - 1.000 - - - - - - -
85. si:rp71-45g20.6 si:rp71-45g20.6 19 1 - 1.000 - - - - - - -
86. si:ch73-59c19.1 ENSDARG00000091909 64 1 - 1.000 - - - - - - - si:ch73-59c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-247]
87. BX511034.2 ENSDARG00000071636 31 1 - 1.000 - - - - - - - novel protein similar to vertebrate amiloride-sensitive cation channel 2 neuronal (ACCN2) [Source:NCBI gene;Acc:100151078]
88. si:dkey-269o24.7 si:dkey-269o24.7 28 1 1.000 - - - - - - - -
89. C2CD4A ENSDARG00000061416 61 1 - 1.000 - - - - - - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
90. epm2a ENSDARG00000059044 10 1 1.000 - - - - - - - - epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
91. si:ch73-62b13.1 ENSDARG00000093269 11 1 - 1.000 - - - - - - - si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]
92. BX323793.2 BX323793.2 61 1 - 1.000 - - - - - - -
93. jam3a ENSDARG00000114589 630 1 - 1.000 - - - - - - - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
94. AL844567.1_1 AL844567.1_1 34 1 - 1.000 - - - - - - -
95. CR936975.1 ENSDARG00000096862 22 1 - 1.000 - - - - - - -
96. bbs10 ENSDARG00000069515, ENSDARG00000110925 36 1 - 1.000 - - - - - - - Bardet-Biedl syndrome 10 [Source:ZFIN;Acc:ZDB-GENE-060503-355]
97. CT583679.2 CT583679.2 10 1 1.000 - - - - - - - -
98. arid5a ENSDARG00000077120 26 1 1.000 - - - - - - - - AT rich interactive domain 5A (MRF1-like) [Source:ZFIN;Acc:ZDB-GENE-100525-3]
99. cdkn1bb_1 ENSDARG00000054271 5 1 1.000 - - - - - - - - cyclin-dependent kinase inhibitor 1Bb [Source:ZFIN;Acc:ZDB-GENE-030521-13]
100. lcn15 ENSDARG00000067851 140 1 1.000 - - - - - - - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]

There are 795 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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