Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for APBB3

Gene Name Gene ID Reads Annotation
APBB3 ENSDARG00000053771 654 amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]










Genes with expression patterns similar to APBB3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. APBB3 ENSDARG00000053771 654 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
2. negr1 ENSDARG00000021607 1051 4.118 0.744 0.903 - - - 0.801 0.887 - 0.783 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
3. gng3 ENSDARG00000009553 2530 3.506 0.879 - - - - 0.911 0.995 0.721 - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
4. dnajc5aa ENSDARG00000042948 2885 3.349 0.823 - - - - 0.879 0.930 - 0.717 DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
5. tuba1c ENSDARG00000055216 8384 3.208 0.774 - - - - 0.751 0.980 - 0.703 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
6. atp6v0cb ENSDARG00000036577 3472 3.155 0.771 - - - - 0.712 0.967 - 0.705 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
7. BSN BSN 463 3.027 0.787 - - - - 0.778 0.748 - 0.714
8. bhlhe22 ENSDARG00000058039 1673 2.813 0.847 - - - - 0.975 0.991 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
9. elavl4 ENSDARG00000045639 998 2.805 0.950 - - - - 0.862 0.993 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
10. scn2b ENSDARG00000101713 796 2.777 0.909 - - - - 0.889 0.979 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
11. ntrk2a ENSDARG00000059897 185 2.723 0.896 - - - - 0.895 0.932 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
12. cdk5r1b ENSDARG00000045087 2075 2.721 0.917 - - - - 0.853 0.951 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
13. GADD45G GADD45G 382 2.713 0.916 - - - - 0.808 0.989 - -
14. sv2bb ENSDARG00000060711 196 2.71 0.846 - - - - 0.883 0.981 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
15. SPOCK1 ENSDARG00000074644 794 2.7 0.838 - - - - 0.877 0.985 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
16. nhlh2 ENSDARG00000025495 1860 2.691 - - - - - 0.905 0.963 - 0.823 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
17. TUBB8P7_1 TUBB8P7_1 2722 2.676 0.936 - - - - 0.762 0.978 - -
18. stx1b ENSDARG00000000503 2724 2.676 0.884 - - - - 0.826 0.966 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
19. NEFH NEFH 101 2.669 0.907 - - - - 0.888 0.874 - -
20. dbx2 2971 2.659 0.864 - - - - 0.817 0.978 - - developing brain homeobox 2
21. nefmb ENSDARG00000043697 2052 2.656 0.937 - - - - 0.878 0.841 - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
22. gsx1 ENSDARG00000035735 1243 2.649 0.863 - - - - 0.849 0.937 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
23. CR407704.1 CR407704.1 188 2.643 0.838 - - - - 0.848 0.957 - -
24. ATP6AP1L ATP6AP1L 164 2.642 0.840 - - - - 0.821 0.981 - -
25. slc8a2b ENSDARG00000100592 598 2.638 0.741 - - - - 0.931 0.966 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
26. SKOR2 SKOR2 1041 2.637 0.900 - - - - 0.839 0.898 - -
27. rheb ENSDARG00000090213 1432 2.636 0.837 - - - - 0.938 0.861 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
28. sypb ENSDARG00000002230 262 2.627 0.855 - - - - 0.826 0.946 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
29. phactr3a ENSDARG00000058243 150 2.625 - 0.860 - - - 0.834 0.931 - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
30. cspg5a ENSDARG00000069981 1699 2.624 0.768 - - - - 0.878 0.978 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
31. gabrg2 ENSDARG00000053665 434 2.621 0.789 - - - - 0.886 0.946 - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
32. sox19b ENSDARG00000040266 532 2.62 0.830 - - - - 0.891 0.899 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
33. syngr3a ENSDARG00000014871 405 2.617 0.800 - - - - 0.920 0.897 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
34. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.617 0.820 - - - - 0.860 0.937 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
35. dpysl3 ENSDARG00000002587 4381 2.616 0.818 - - - - 0.830 0.968 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
36. scn8aa ENSDARG00000005775 792 2.615 0.956 - - - - 0.771 0.888 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
37. her8.2 ENSDARG00000069675 315 2.613 0.775 - - - - 0.904 0.934 - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
38. C8H1orf106 C8H1orf106 2690 2.609 0.863 - - - - 0.881 0.865 - -
39. TUBB8P7_2 TUBB8P7_2 565 2.606 0.780 - - - - 0.885 0.941 - -
40. dnm1b ENSDARG00000009281 219 2.601 0.947 - - - - 0.755 0.899 - - dynamin 1b [Source:ZFIN;Acc:ZDB-GENE-100920-3]
41. si:ch211-152f6.6 si:ch211-152f6.6 278 2.601 0.868 - - - - 0.954 0.779 - -
42. INA INA 950 2.597 0.913 - - - - 0.782 0.902 - -
43. gap43 ENSDARG00000099744 4114 2.595 0.899 - - - - - 0.938 - 0.758 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
44. zgc:194665 ENSDARG00000004577 136 2.594 0.830 - - - - 0.825 0.939 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
45. cacng2a ENSDARG00000032565 99 2.592 0.740 - - - - 0.915 0.937 - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
46. celf4 ENSDARG00000070045 1537 2.591 0.813 - - - - 0.806 0.972 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
47. nadl1.1 1200 2.59 0.830 - - - - 0.779 0.981 - - neural adhesion molecule L1.1, transcript variant X1
48. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.588 0.731 - - - - 0.870 0.987 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
49. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.586 0.912 - - - - 0.705 0.969 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
50. SYT2 ENSDARG00000014169 265 2.581 0.811 - - - - 0.875 0.895 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
51. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 2.579 0.853 - - - - 0.879 0.847 - - leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]
52. snap25a ENSDARG00000020609 4537 2.576 0.864 - - - - 0.759 0.953 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
53. cdk5r2a ENSDARG00000071011 167 2.571 0.890 - - - - 0.732 0.949 - - cyclin-dependent kinase 5, regulatory subunit 2a (p39) [Source:ZFIN;Acc:ZDB-GENE-050417-22]
54. ckbb ENSDARG00000043257 3503 2.57 0.785 - - - - 0.861 0.924 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
55. rusc1 ENSDARG00000078125 617 2.566 0.913 - - - - 0.804 0.849 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
56. adam23a ENSDARG00000062323 580 2.565 0.871 - - - - 0.770 0.924 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
57. napg napg 645 2.564 - 0.905 - - - 0.745 0.914 - -
58. rbfox3 rbfox3 1443 2.562 0.799 - - - - 0.838 0.925 - -
59. slc1a2b ENSDARG00000102453 3136 2.559 0.893 - - - - 0.760 0.906 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
60. map7d2a ENSDARG00000068480 513 2.557 0.790 - - - - 0.860 0.907 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
61. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.557 0.901 - - - - 0.728 0.928 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
62. lhx1a ENSDARG00000014018 958 2.55 - - - - - 0.901 0.931 - 0.718 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
63. clvs2 ENSDARG00000053122 1390 2.548 0.741 - - - - - 0.969 - 0.838 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
64. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.545 0.813 - - - - 0.868 0.864 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
65. CAMSAP3 ENSDARG00000059475 263 2.544 0.961 - - - - 0.740 0.843 - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
66. syt4 ENSDARG00000036505 421 2.543 0.868 - - - - 0.842 0.833 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
67. nmnat2 ENSDARG00000004580 370 2.542 0.968 - - - - 0.707 0.867 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
68. CABZ01111990.1 CABZ01111990.1 4374 2.541 0.724 - - - - 0.860 0.957 - -
69. epb41a ENSDARG00000099283 860 2.535 - 0.844 - - - 0.831 0.860 - - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
70. rab3ab ENSDARG00000043835 1267 2.534 0.846 - - - - 0.724 0.964 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
71. mllt11 ENSDARG00000071026 2518 2.534 0.873 - - - - 0.725 0.936 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
72. evlb ENSDARG00000099720 245 2.533 - - - 0.722 - 0.925 0.886 - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
73. cadm3 ENSDARG00000057013 1545 2.533 0.896 - - - - 0.734 0.903 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
74. STMN3 ENSDARG00000038465 1009 2.53 0.751 - - - - 0.816 0.963 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
75. tmem59l ENSDARG00000003655 1536 2.529 0.772 - - - - 0.878 0.879 - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
76. cacng3b ENSDARG00000076401 91 2.526 0.884 - - - - 0.744 0.898 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
77. fez1 ENSDARG00000023174 701 2.518 0.973 - - - - - 0.792 - 0.753 fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
78. sept5a ENSDARG00000013843 1206 2.516 0.809 - - - - 0.805 0.902 - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
79. AGO1 ENSDARG00000092644 4521 2.515 0.740 - - - - 0.867 0.908 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
80. jag1a ENSDARG00000030289 1275 2.513 0.810 - - - - 0.823 0.880 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
81. epha4b ENSDARG00000011600 3110 2.499 0.750 - - - - 0.802 0.947 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
82. pax6a ENSDARG00000103379 3061 2.498 0.741 - - - - 0.838 0.919 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
83. UBE2QL1 ENSDARG00000079276 3474 2.496 0.768 - - - - 0.819 0.909 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
84. msi1 ENSDARG00000010710 2634 2.494 0.701 - - - - 0.826 0.967 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
85. GJD2_1 GJD2_1 3045 2.493 0.878 - - - - 0.766 0.849 - -
86. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 2.49 0.748 0.829 - - - - 0.913 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
87. tmem35 ENSDARG00000052567 5685 2.485 0.759 - - - - 0.791 0.935 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
88. C7H4orf48 C7H4orf48 1455 2.484 0.801 - - - - - 0.911 - 0.772
89. nacad ENSDARG00000012347 1268 2.484 0.806 - - - - 0.895 0.783 - - NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
90. kcnd1 ENSDARG00000074746 153 2.482 0.937 - - - - 0.810 0.735 - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
91. sh3gl2 sh3gl2 1305 2.479 0.841 - - - - 0.726 0.912 - -
92. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 2.474 0.728 - - - - 0.896 0.850 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
93. lgi1a ENSDARG00000020493 1218 2.471 0.737 - - - - 0.885 0.849 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
94. EFCC1 ENSDARG00000077826 1359 2.471 0.728 - - - - 0.825 0.918 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
95. map1aa ENSDARG00000059601 599 2.467 0.782 - - - - 0.906 0.779 - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
96. nes ENSDARG00000088805 2710 2.466 - - - - - 0.792 0.952 0.722 - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
97. calb1 ENSDARG00000031598 252 2.463 0.910 - - - - 0.709 0.844 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
98. dync1i1 ENSDARG00000060948 554 2.457 - - - - - 0.823 0.925 - 0.709 dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
99. fgf13b ENSDARG00000056633 455 2.455 0.834 - - - - 0.838 0.783 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
100. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.448 0.768 - - - - 0.753 0.927 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]

There are 2129 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA