Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for APBA1

Gene Name Gene ID Reads Annotation
APBA1 ENSGALG00000015111 261 amyloid beta precursor protein binding family A member 1 [Source:HGNC Symbol;Acc:HGNC:578]











Genes with expression patterns similar to APBA1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. APBA1 ENSGALG00000015111 261 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 amyloid beta precursor protein binding family A member 1 [Source:HGNC Symbol;Acc:HGNC:578]
2. SULT1E1 ENSGALG00000011812 70 1.516 - - - - - - - 0.718 - 0.798 sulfotransferase family 1E member 1
3. PRODH ENSGALG00000007728 1659 0.957 - - - - - - - - - 0.957 proline dehydrogenase 1
4. AKAP10 ENSGALG00000004679 103 0.956 - - - - - - - - - 0.956 A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
5. PAG1 ENSGALG00000034188 9 0.951 - - - - - - - - - 0.951 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:HGNC Symbol;Acc:HGNC:30043]
6. TPCN2 ENSGALG00000007550 10 0.951 - - - - - - - - - 0.951 two pore segment channel 2 [Source:HGNC Symbol;Acc:HGNC:20820]
7. LANCL3 ENSGALG00000016265 9 0.95 - - - - - - - - - 0.950 LanC like 3 [Source:HGNC Symbol;Acc:HGNC:24767]
8. S1PR1 ENSGALG00000005208 12 0.947 - - - - - - - - - 0.947 sphingosine-1-phosphate receptor 1 [Source:HGNC Symbol;Acc:HGNC:3165]
9. LONRF2 ENSGALG00000016768 193 0.946 - - - - - - - - - 0.946 LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
10. HERPUD1 ENSGALG00000001220 18 0.946 - - - - - - - - - 0.946 homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
11. LPGAT1 ENSGALG00000009848 33 0.946 - - - - - - - - - 0.946 lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
12. FANCA ENSGALG00000000516 250 0.944 - - - - - - - - - 0.944 Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
13. EHD4 ENSGALG00000008950 22 0.943 - - - - - - - - - 0.943 EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
14. SCL SCL 69 0.942 - - - - - - - - - 0.942
15. WNK4 ENSGALG00000032191 962 0.94 - - - - - - - - - 0.940 WNK lysine deficient protein kinase 4 [Source:HGNC Symbol;Acc:HGNC:14544]
16. SIAT7E SIAT7E 13 0.937 - - - - - - - - - 0.937
17. FER1L6 ENSGALG00000033783 196 0.936 - - - - - - - - - 0.936 fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
18. WDR63 ENSGALG00000008696 15 0.936 - - - - - - - - - 0.936 WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
19. PLEKHA1 ENSGALG00000034548 34 0.936 - - - - - - - - - 0.936 pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
20. XYLT1 ENSGALG00000006757 169 0.935 - - - - - - - - - 0.935 xylosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15516]
21. FAM160A2 ENSGALG00000003416 23 0.934 - - - - - - - - - 0.934 family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
22. ARHGAP42 ENSGALG00000017196 240 0.931 - - - - - - - - - 0.931 Rho GTPase activating protein 42 [Source:HGNC Symbol;Acc:HGNC:26545]
23. RAD54L2 ENSGALG00000003243 187 0.928 - - - - - - - - - 0.928 RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
24. CCP110 ENSGALG00000006925 59 0.926 - - - - - - - - - 0.926 centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
25. PRTFDC1 ENSGALG00000007694 111 0.925 - - - - - - - - - 0.925 phosphoribosyl transferase domain containing 1 [Source:NCBI gene;Acc:420499]
26. UPF3A ENSGALG00000016815 48 0.924 - - - - - - - - - 0.924 UPF3A, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20332]
27. GAA ENSGALG00000038853 158 0.923 - - - - - - - - - 0.923 glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
28. CSMD3 ENSGALG00000031578 23 0.922 - - - - - - - - - 0.922 CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:HGNC:19291]
29. MRVI1 ENSGALG00000005632 450 0.92 - - - - - - - - - 0.920 murine retrovirus integration site 1 homolog [Source:HGNC Symbol;Acc:HGNC:7237]
30. CSRP3 ENSGALG00000004044 456 0.919 - - - - - - - - - 0.919 cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
31. ATP6AP2 ENSGALG00000016241 257 0.918 - - - - - - - - - 0.918 ATPase H+ transporting accessory protein 2 [Source:NCBI gene;Acc:418573]
32. VPS13B 2293 0.918 - - - - - - - - - 0.918 vacuolar protein sorting 13 homolog B
33. PPP4R1 ENSGALG00000032092 1135 0.916 - - - - - - - - - 0.916 protein phosphatase 4 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:9320]
34. POLR3B ENSGALG00000012655 704 0.913 - - - - - - - - - 0.913 Gallus gallus RNA polymerase III subunit B (POLR3B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321490]
35. PIK3R3 ENSGALG00000010335 374 0.913 - - - - - - - - - 0.913 phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
36. IPMK ENSGALG00000002710 40 0.912 - - - - - - - - - 0.912 inositol polyphosphate multikinase [Source:HGNC Symbol;Acc:HGNC:20739]
37. SP2 ENSGALG00000000233 43 0.912 - - - - - - - - - 0.912 Sp2 transcription factor [Source:HGNC Symbol;Acc:HGNC:11207]
38. PLCG2 ENSGALG00000033507 348 0.911 - - - - - - - - - 0.911 phospholipase C gamma 2 [Source:HGNC Symbol;Acc:HGNC:9066]
39. TLN1 ENSGALG00000002548 489 0.904 - - - - - - - - - 0.904 talin 1 [Source:NCBI gene;Acc:395194]
40. DOCK9 ENSGALG00000016883 128 0.904 - - - - - - - - - 0.904 dedicator of cytokinesis 9 [Source:HGNC Symbol;Acc:HGNC:14132]
41. EPC1 ENSGALG00000007169 101 0.903 - - - - - - - - - 0.903 enhancer of polycomb homolog 1 [Source:HGNC Symbol;Acc:HGNC:19876]
42. FAM178A FAM178A 2738 0.903 - - - - - - - - - 0.903
43. FAM161A ENSGALG00000008810 36 0.902 - - - - - - - - - 0.902 FAM161A, centrosomal protein [Source:HGNC Symbol;Acc:HGNC:25808]
44. RASA4 ENSGALG00000001876 178 0.902 - - - - - - - - - 0.902 RAS p21 protein activator 4 [Source:NCBI gene;Acc:417513]
45. ETNPPL ENSGALG00000034741 39 0.902 - - - - - - - - - 0.902 ethanolamine-phosphate phospho-lyase [Source:HGNC Symbol;Acc:HGNC:14404]
46. ENSGALG00000009344 ENSGALG00000009344 330 0.897 - - - - - - - - - 0.897
47. GTF3C6 ENSGALG00000015044 112 0.897 - - - - - - - - - 0.897 general transcription factor IIIC subunit 6 [Source:NCBI gene;Acc:421754]
48. ADC ADC 178 0.896 - - - - - - - - - 0.896
49. PIGV ENSGALG00000039883 32 0.894 - - - - - - - - - 0.894 phosphatidylinositol glycan anchor biosynthesis class V [Source:HGNC Symbol;Acc:HGNC:26031]
50. UBAC1 ENSGALG00000042564 598 0.892 - - - - - - - - - 0.892 UBA domain containing 1 [Source:NCBI gene;Acc:427754]
51. CSGALNACT2 ENSGALG00000002543 138 0.892 - - - - - - - - - 0.892 chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:24292]
52. SLCO2B1 ENSGALG00000017302 239 0.89 - - - - - - - - - 0.890 solute carrier organic anion transporter family member 2B1 [Source:HGNC Symbol;Acc:HGNC:10962]
53. JAG1 ENSGALG00000009020 25 0.887 - - - - - - - - - 0.887 jagged 1 [Source:HGNC Symbol;Acc:HGNC:6188]
54. OSTM1 ENSGALG00000015306 192 0.887 - - - - - - - - - 0.887 osteopetrosis associated transmembrane protein 1 [Source:NCBI gene;Acc:421773]
55. ZNF839 ENSGALG00000011368 148 0.885 - - - - - - - - - 0.885 zinc finger protein 839 [Source:HGNC Symbol;Acc:HGNC:20345]
56. ZNF800 ENSGALG00000033997 415 0.883 - - - - - - - - - 0.883 zinc finger protein 800 [Source:NCBI gene;Acc:417747]
57. SORCS1 ENSGALG00000008465 468 0.882 - - - - - - - - - 0.882 sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
58. PQLC3 ENSGALG00000016449 39 0.881 - - - - - - - - - 0.881 PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
59. OSBPL9 ENSGALG00000010555 395 0.88 - - - - - - - - - 0.880 oxysterol binding protein like 9 [Source:HGNC Symbol;Acc:HGNC:16386]
60. GATM ENSGALG00000023435 102 0.879 - - - - - - - - - 0.879 glycine amidinotransferase [Source:NCBI gene;Acc:395504]
61. SLC7A9 ENSGALG00000021158 1737 0.879 - - - - - - - - - 0.879 solute carrier family 7 member 9 [Source:NCBI gene;Acc:415768]
62. MCMBP ENSGALG00000009455 90 0.879 - - - - - - - - - 0.879 minichromosome maintenance complex binding protein [Source:NCBI gene;Acc:423933]
63. ECHDC1 ENSGALG00000014828 958 0.879 - - - - - - - - - 0.879 ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
64. RNF126 ENSGALG00000042948 4724 0.878 - - - - - - - - - 0.878 ring finger protein 126 [Source:NCBI gene;Acc:420085]
65. RFESD ENSGALG00000014673 198 0.876 - - - - - - - - - 0.876 Rieske Fe-S domain containing [Source:HGNC Symbol;Acc:HGNC:29587]
66. GLRX ENSGALG00000027483 217 0.875 - - - - - - - - - 0.875 glutaredoxin [Source:NCBI gene;Acc:396069]
67. IFT172 ENSGALG00000016509 1226 0.873 - - - - - - - - - 0.873 intraflagellar transport 172 [Source:HGNC Symbol;Acc:HGNC:30391]
68. ZNF330 ENSGALG00000009868 257 0.872 - - - - - - - - - 0.872 zinc finger protein 330 [Source:NCBI gene;Acc:422453]
69. ENSGALG00000021439 ENSGALG00000021439 628 0.869 - - - - - - - - - 0.869
70. DARS2 ENSGALG00000023749 2386 0.865 - - - - - - - - - 0.865 aspartyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25538]
71. ESYT2 ENSGALG00000006542 111 0.865 - - - - - - - - - 0.865 extended synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:22211]
72. CHD2 ENSGALG00000006949 1076 0.864 - - - - - - - - - 0.864 chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:415507]
73. PDK1 ENSGALG00000013235 238 0.862 - - - - - - - - - 0.862 pyruvate dehydrogenase kinase 1 [Source:NCBI gene;Acc:425972]
74. SK2 SK2 74 0.86 - - - - - - - - - 0.860
75. ANKS6 ENSGALG00000013196 215 0.859 - - - - - - - - - 0.859 ankyrin repeat and sterile alpha motif domain containing 6 [Source:HGNC Symbol;Acc:HGNC:26724]
76. TUBGCP3 ENSGALG00000016836 332 0.858 - - - - - - - - - 0.858 tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
77. CSMD2 ENSGALG00000030229 716 0.858 - - - - - - - - - 0.858 CUB and Sushi multiple domains 2 [Source:HGNC Symbol;Acc:HGNC:19290]
78. PEX1 ENSGALG00000009410 902 0.856 - - - - - - - - - 0.856 peroxisomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8850]
79. DENND4A ENSGALG00000041403 57 0.855 - - - - - - - - - 0.855 DENN domain containing 4A [Source:HGNC Symbol;Acc:HGNC:24321]
80. COX19 ENSGALG00000027698 4398 0.853 - - - - - - - - - 0.853 cytochrome c oxidase assembly factor COX19 [Source:NCBI gene;Acc:416452]
81. RIT1 ENSGALG00000014647 7174 0.85 - - - - - - - - - 0.850 Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
82. GRIN3B ENSGALG00000026241 177 0.85 - - - - - - - - - 0.850 glutamate ionotropic receptor NMDA type subunit 3B [Source:HGNC Symbol;Acc:HGNC:16768]
83. SLITRK4 ENSGALG00000007242 165 0.85 - - - - - - - - - 0.850 SLIT and NTRK like family member 4 [Source:HGNC Symbol;Acc:HGNC:23502]
84. DAB2IP ENSGALG00000001419 100 0.848 - - - - - - - - - 0.848 DAB2 interacting protein [Source:HGNC Symbol;Acc:HGNC:17294]
85. RFX3 ENSGALG00000010179 305 0.848 - - - - - - - - - 0.848 regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
86. RPRD1A ENSGALG00000013129 332 0.848 - - - - - - - - - 0.848 regulation of nuclear pre-mRNA domain containing 1A [Source:NCBI gene;Acc:420953]
87. WARS ENSGALG00000011228 193 0.848 - - - - - - - - - 0.848 tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
88. MOB2 ENSGALG00000030499 3658 0.847 - - - - - - - - - 0.847 MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
89. TOR2A ENSGALG00000026424 1182 0.847 - - - - - - - - - 0.847 torsin family 2 member A [Source:HGNC Symbol;Acc:HGNC:11996]
90. NEURL NEURL 221 0.846 - - - - - - - - - 0.846
91. CHAC1 ENSGALG00000027874 242 0.846 - - - - - - - - - 0.846 ChaC glutathione specific gamma-glutamylcyclotransferase 1 [Source:NCBI gene;Acc:423209]
92. MYO18A ENSGALG00000003741 1023 0.846 - - - - - - - - - 0.846 myosin XVIIIA [Source:HGNC Symbol;Acc:HGNC:31104]
93. DNAAF1 ENSGALG00000003258 115 0.845 - - - - - - - - - 0.845 dynein axonemal assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:30539]
94. ZCCHC8 ENSGALG00000004486 3201 0.844 - - - - - - - - - 0.844 zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
95. KLHL5 ENSGALG00000031388 2461 0.844 - - - - - - - - - 0.844 kelch like family member 5 [Source:HGNC Symbol;Acc:HGNC:6356]
96. SCAF4 ENSGALG00000033965 2027 0.844 - - - - - - - - - 0.844 SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
97. FKBP8 ENSGALG00000003357 942 0.843 - - - - - - - - - 0.843 FK506 binding protein 8 [Source:NCBI gene;Acc:420123]
98. ZFAND6 ENSGALG00000006505 48 0.842 - - - - - - - - - 0.842 zinc finger AN1-type containing 6 [Source:NCBI gene;Acc:415483]
99. PPP4R4 ENSGALG00000010950 19 0.841 - - - - - - - - - 0.841 protein phosphatase 4 regulatory subunit 4 [Source:HGNC Symbol;Acc:HGNC:23788]
100. ACSF3 ENSGALG00000035225 261 0.841 - - - - - - - - - 0.841 acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]

There are 146 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA