Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for APAF1

Gene Name Gene ID Reads Annotation
APAF1 ENSGALG00000011531 3102 apoptotic peptidase activating factor 1 [Source:HGNC Symbol;Acc:HGNC:576]











Genes with expression patterns similar to APAF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. APAF1 ENSGALG00000011531 3102 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 apoptotic peptidase activating factor 1 [Source:HGNC Symbol;Acc:HGNC:576]
2. ABL ABL 9532 1.677 - - - - - - 0.732 0.945 - -
3. PI4KA ENSGALG00000040756 3973 1.665 - - - - - - 0.708 0.957 - - phosphatidylinositol 4-kinase alpha [Source:HGNC Symbol;Acc:HGNC:8983]
4. NUPL1 NUPL1 8197 1.572 - - - - - - 0.718 0.854 - -
5. MED9 ENSGALG00000031214 10779 1.572 - - - - - - 0.704 0.868 - - mediator complex subunit 9 [Source:NCBI gene;Acc:416506]
6. DNAJC19 ENSGALG00000008852 6093 1.502 - - - - - - 0.706 0.796 - - DnaJ heat shock protein family (Hsp40) member C19 [Source:HGNC Symbol;Acc:HGNC:30528]
7. PPP2R5C ENSGALG00000029996 5759 0.986 - - - - - - - 0.986 - - protein phosphatase 2 regulatory subunit B'gamma [Source:NCBI gene;Acc:423460]
8. GPS1 ENSGALG00000002827 8433 0.983 - - - - - - - 0.983 - - G protein pathway suppressor 1 [Source:NCBI gene;Acc:417382]
9. RFWD3 2315 0.961 - - - - - - - 0.961 - - ring finger and WD repeat domain 3
10. PHF12 ENSGALG00000031368 1960 0.96 - - - - - - - 0.960 - - PHD finger protein 12 [Source:HGNC Symbol;Acc:HGNC:20816]
11. ACTR10 ENSGALG00000012041 2752 0.96 - - - - - - - 0.960 - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
12. SLC43A3 ENSGALG00000020479 1332 0.959 - - - - - - - 0.959 - - solute carrier family 43 member 3 [Source:HGNC Symbol;Acc:HGNC:17466]
13. USP3 ENSGALG00000003427 1236 0.959 - - - - - - - 0.959 - - ubiquitin specific peptidase 3 [Source:HGNC Symbol;Acc:HGNC:12626]
14. DTD2 ENSGALG00000009978 4322 0.959 - - - - - - - 0.959 - - D-tyrosyl-tRNA deacylase 2 (putative) [Source:HGNC Symbol;Acc:HGNC:20277]
15. C10orf76 C10orf76 2424 0.959 - - - - - - - 0.959 - -
16. DERL3 ENSGALG00000005994 1499 0.959 - - - - - - - 0.959 - - derlin 3 [Source:NCBI gene;Acc:416934]
17. FAM114A1 ENSGALG00000013583 736 0.959 - - - - - - - 0.959 - - family with sequence similarity 114 member A1 [Source:NCBI gene;Acc:426196]
18. C3H6ORF120 C3H6ORF120 2712 0.959 - - - - - - - 0.959 - -
19. LYPLA2 ENSGALG00000004002 3939 0.959 - - - - - - - 0.959 - - lysophospholipase II [Source:NCBI gene;Acc:419685]
20. TTC39A ENSGALG00000010540 1025 0.959 - - - - - - - 0.959 - - tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:HGNC:18657]
21. TMEFF1 ENSGALG00000013212 4222 0.959 - - - - - - - 0.959 - - transmembrane protein with EGF-like and two follistatin-like domains 1
22. ACL ACL 1813 0.959 - - - - - - - 0.959 - -
23. RGMA ENSGALG00000039173 12874 0.959 - - - - - - - 0.959 - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
24. CDC123 ENSGALG00000014038 1418 0.959 - - - - - - - 0.959 - - cell division cycle 123 [Source:HGNC Symbol;Acc:HGNC:16827]
25. CUTC ENSGALG00000037283 2530 0.959 - - - - - - - 0.959 - - cutC copper transporter [Source:NCBI gene;Acc:423829]
26. NUDCD1 ENSGALG00000040879 2965 0.959 - - - - - - - 0.959 - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
27. UBQLN1 ENSGALG00000012585 5158 0.959 - - - - - - - 0.959 - - ubiquilin 1 [Source:HGNC Symbol;Acc:HGNC:12508]
28. RRAGD ENSGALG00000026971 2429 0.959 - - - - - - - 0.959 - - Ras related GTP binding D [Source:HGNC Symbol;Acc:HGNC:19903]
29. DIP2C ENSGALG00000006652 1858 0.958 - - - - - - - 0.958 - - disco interacting protein 2 homolog C [Source:HGNC Symbol;Acc:HGNC:29150]
30. DARS ENSGALG00000012355 2887 0.958 - - - - - - - 0.958 - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
31. WDR47 ENSGALG00000002129 2624 0.958 - - - - - - - 0.958 - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
32. HIC2 ENSGALG00000033416 4051 0.958 - - - - - - - 0.958 - - hypermethylated in cancer 2 [Source:NCBI gene;Acc:416768]
33. ENSGALG00000004643 ENSGALG00000004643 2297 0.958 - - - - - - - 0.958 - -
34. OLFM1 ENSGALG00000002515 1841 0.958 - - - - - - - 0.958 - - olfactomedin 1 [Source:NCBI gene;Acc:395535]
35. TP53INP1 ENSGALG00000041353 6890 0.958 - - - - - - - 0.958 - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
36. TOLLIP ENSGALG00000006697 917 0.958 - - - - - - - 0.958 - - toll interacting protein [Source:NCBI gene;Acc:423099]
37. PYURF ENSGALG00000039869 5657 0.957 - - - - - - - 0.957 - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
38. SDAD1 ENSGALG00000011543 5191 0.957 - - - - - - - 0.957 - - SDA1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25537]
39. SOCS5 ENSGALG00000010016 1134 0.957 - - - - - - - 0.957 - - suppressor of cytokine signaling 5 [Source:NCBI gene;Acc:428570]
40. SNAI1 ENSGALG00000008018 3930 0.957 - - - - - - - 0.957 - - snail family transcriptional repressor 1 [Source:NCBI gene;Acc:396047]
41. DACH1 ENSGALG00000037015 5648 0.957 - - - - - - - 0.957 - - dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
42. RP2 ENSGALG00000016728 3291 0.957 - - - - - - - 0.957 - - RP2, ARL3 GTPase activating protein [Source:NCBI gene;Acc:418675]
43. TRNT1 ENSGALG00000017368 11932 0.956 - - - - - - - 0.956 - - tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]
44. NABP1 ENSGALG00000025884 4195 0.956 - - - - - - - 0.956 - - nucleic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26232]
45. HCFC2 ENSGALG00000029616 4525 0.956 - - - - - - - 0.956 - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
46. LONP1 ENSGALG00000040492 7133 0.955 - - - - - - - 0.955 - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
47. MFN1 ENSGALG00000041873 4170 0.954 - - - - - - - 0.954 - - mitofusin 1 [Source:NCBI gene;Acc:424973]
48. RPF1 ENSGALG00000008796 9809 0.954 - - - - - - - 0.954 - - ribosome production factor 1 homolog
49. NDUFAF2 ENSGALG00000027564 7302 0.953 - - - - - - - 0.953 - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
50. SYNE2 ENSGALG00000011811 5542 0.952 - - - - - - - 0.952 - - spectrin repeat containing nuclear envelope protein 2 [Source:HGNC Symbol;Acc:HGNC:17084]
51. PITX3 ENSGALG00000005613 1518 0.95 - - - - - - - 0.950 - - paired like homeodomain 3
52. ZNF639 ENSGALG00000005944 6387 0.949 - - - - - - - 0.949 - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
53. ZC3H6 ENSGALG00000008269 10353 0.949 - - - - - - - 0.949 - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
54. DCAF7 ENSGALG00000000510 8681 0.948 - - - - - - - 0.948 - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
55. PDZD11 ENSGALG00000004198 11484 0.945 - - - - - - - 0.945 - - PDZ domain containing 11 [Source:NCBI gene;Acc:422153]
56. DYRK2 ENSGALG00000009901 3141 0.945 - - - - - - - 0.945 - - dual specificity tyrosine phosphorylation regulated kinase 2 [Source:NCBI gene;Acc:427864]
57. GPATCH1 ENSGALG00000004839 6455 0.944 - - - - - - - 0.944 - - G-patch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24658]
58. ST5 6869 0.944 - - - - - - - 0.944 - - suppression of tumorigenicity 5, transcript variant X1
59. USP9X ENSGALG00000016236 9419 0.942 - - - - - - - 0.942 - - ubiquitin specific peptidase 9, X-linked, transcript variant X3
60. GALNT1 ENSGALG00000013135 13583 0.941 - - - - - - - 0.941 - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
61. HAPLN1 ENSGALG00000015627 14942 0.941 - - - - - - - 0.941 - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
62. PPP3CB ENSGALG00000005243 8794 0.941 - - - - - - - 0.941 - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
63. MICU3 ENSGALG00000013661 1466 0.94 - - - - - - - 0.940 - - mitochondrial calcium uptake family member 3 [Source:HGNC Symbol;Acc:HGNC:27820]
64. COMMD7 ENSGALG00000006630 11491 0.938 - - - - - - - 0.938 - - COMM domain containing 7 [Source:NCBI gene;Acc:419286]
65. DHFR ENSGALG00000026757 18478 0.937 - - - - - - - 0.937 - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
66. TFIP11 ENSGALG00000005623 7784 0.932 - - - - - - - 0.932 - - tuftelin interacting protein 11 [Source:NCBI gene;Acc:416909]
67. SAMHD1 ENSGALG00000001231 5218 0.928 - - - - - - - 0.928 - - SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 [Source:NCBI gene;Acc:419125]
68. RGL1 ENSGALG00000004728 3004 0.924 - - - - - - - 0.924 - - ral guanine nucleotide dissociation stimulator like 1 [Source:NCBI gene;Acc:424446]
69. TMEM120B ENSGALG00000004254 2819 0.92 - - - - - - - 0.920 - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
70. COG7 ENSGALG00000006156 4072 0.902 - - - - - - - 0.902 - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
71. PKP2 ENSGALG00000012913 2547 0.893 - - - - - - - 0.893 - - plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]
72. CIAPIN1 ENSGALG00000029268 23036 0.889 - - - - - - - 0.889 - - cytokine induced apoptosis inhibitor 1 [Source:NCBI gene;Acc:415637]
73. PTPLB PTPLB 13107 0.874 - - - - - - - 0.874 - -
74. MT-ND4L MT-ND4L 12537 0.873 - - - - - - - 0.873 - -
75. FGFR2 ENSGALG00000009495 15391 0.859 - - - - - - - 0.859 - - fibroblast growth factor receptor 2 [Source:NCBI gene;Acc:396259]
76. ZCCHC8 ENSGALG00000004486 3201 0.856 - - - - - - - 0.856 - - zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
77. PTCD3 ENSGALG00000015773 3059 0.856 - - - - - - - 0.856 - - pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
78. gga-mir-1778 ENSGALG00000025181 8765 0.853 - - - - - - - 0.853 - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
79. EGLN1 ENSGALG00000041422 11032 0.847 - - - - - - - 0.847 - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
80. ALG2 ENSGALG00000013573 5229 0.836 - - - - - - - 0.836 - - ALG2, alpha-1,3/1,6-mannosyltransferase [Source:HGNC Symbol;Acc:HGNC:23159]
81. RBM25 ENSGALG00000009332 10842 0.832 - - - - - - - 0.832 - - RNA binding motif protein 25 [Source:NCBI gene;Acc:423250]
82. STAM ENSGALG00000035287 7649 0.83 - - - - - - - 0.830 - - signal transducing adaptor molecule [Source:HGNC Symbol;Acc:HGNC:11357]
83. MRPL35 ENSGALG00000022950 26070 0.827 - - - - - - - 0.827 - - mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]
84. GGA.31975 GGA.31975 8825 0.823 - - - - - - - 0.823 - -
85. LARP1 ENSGALG00000040109 14808 0.822 - - - - - - - 0.822 - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
86. COPB2 ENSGALG00000005357 15208 0.821 - - - - - - - 0.821 - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
87. PAPSS1 ENSGALG00000010542 5631 0.816 - - - - - - 0.816 - - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
88. MIEN1 ENSGALG00000026328 3396 0.811 - - - - - - 0.811 - - - migration and invasion enhancer 1 [Source:HGNC Symbol;Acc:HGNC:28230]
89. DBNDD2 ENSGALG00000003921 8301 0.811 - - - - - - - 0.811 - - dysbindin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15881]
90. NDUFS7 ENSGALG00000009703 19674 0.81 - - - - - - - 0.810 - - NADH:ubiquinone oxidoreductase core subunit S7 [Source:HGNC Symbol;Acc:HGNC:7714]
91. SMARCA1 ENSGALG00000008431 4000 0.807 - - - - - - 0.807 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:HGNC Symbol;Acc:HGNC:11097]
92. WTAP ENSGALG00000011660 10811 0.807 - - - - - - - 0.807 - - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
93. SRI ENSGALG00000008985 13865 0.807 - - - - - - - 0.807 - - sorcin [Source:NCBI gene;Acc:420538]
94. SF3B1 ENSGALG00000008038 30161 0.8 - - - - - - - 0.800 - - splicing factor 3b subunit 1 [Source:HGNC Symbol;Acc:HGNC:10768]
95. EFNB2 ENSGALG00000029175 5664 0.799 - - - - - - - 0.799 - - ephrin B2 [Source:NCBI gene;Acc:395625]
96. TBCD ENSGALG00000001503 7880 0.794 - - - - - - 0.794 - - - tubulin folding cofactor D [Source:NCBI gene;Acc:417334]
97. UBR5 ENSGALG00000031282 12143 0.794 - - - - - - - 0.794 - - ubiquitin protein ligase E3 component n-recognin 5 [Source:HGNC Symbol;Acc:HGNC:16806]
98. BRMS1L ENSGALG00000010093 4964 0.793 - - - - - - 0.793 - - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
99. PSMC3 ENSGALG00000008108 22922 0.792 - - - - - - 0.792 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
100. ACAA2 ENSGALG00000031142 29220 0.789 - - - - - - - 0.789 - - acetyl-CoA acyltransferase 2 [Source:NCBI gene;Acc:426847]

There are 191 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA