Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for AP3S1

Gene Name Gene ID Reads Annotation
AP3S1 ENSGALG00000002341 12388 adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]











Genes with expression patterns similar to AP3S1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. AP3S1 ENSGALG00000002341 12388 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
2. SF3A3 ENSGALG00000001540 9664 2.471 - - - - - - 0.854 0.788 - 0.829 splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
3. BPTF ENSGALG00000038222 7521 1.834 - - - - - - 0.885 0.949 - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
4. BFAR ENSGALG00000003111 1778 1.833 - - - - - - 0.870 0.963 - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
5. RPA1 ENSGALG00000003072 8023 1.826 - - - - - - 0.864 0.962 - - replication protein A1 [Source:NCBI gene;Acc:417563]
6. NPHP3 ENSGALG00000034586 1465 1.808 - - - - - - 0.849 0.959 - - nephrocystin 3, transcript variant X1
7. RGCC ENSGALG00000016954 1282 1.774 - - - - - - 0.816 0.958 - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
8. BET1 ENSGALG00000024485 2451 1.746 - - - - - - - 0.969 - 0.777 Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
9. INTS10 ENSGALG00000010130 6320 1.72 - - - - - - 0.869 - - 0.851 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
10. NARS ENSGALG00000040506 9506 1.709 - - - - - - 0.861 - - 0.848 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
11. DNA2 ENSGALG00000004037 5426 1.69 - - - - - - 0.878 - - 0.812 DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
12. CCND1 ENSGALG00000007555 6715 1.649 - - - - - - 0.866 - - 0.783 cyclin D1 [Source:NCBI gene;Acc:396341]
13. PMM2 ENSGALG00000007326 8260 1.644 - - - - - - 0.885 - - 0.759 phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
14. ATP5C1 53961 1.64 - - - - - - 0.856 - - 0.784 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X1
15. RAB20 ENSGALG00000016844 3250 1.629 - - - - - - 0.812 - - 0.817 RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
16. UBE2E3 ENSGALG00000020793 9517 1.584 - - - - - - - 0.835 - 0.749 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
17. KIF15 ENSGALG00000036645 9946 1.551 - - - - - - 0.830 0.721 - - kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]
18. UBR7 ENSGALG00000010842 16488 1.55 - - - - - - 0.771 0.779 - - Gallus gallus ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318461]
19. HNRNPLL ENSGALG00000008504 14719 1.538 - - - - - - - 0.752 - 0.786 heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
20. RCC2 ENSGALG00000031684 28067 1.533 - - - - - - 0.770 0.763 - - regulator of chromosome condensation 2 [Source:HGNC Symbol;Acc:HGNC:30297]
21. PSMC2 ENSGALG00000008236 25980 1.53 - - - - - - 0.795 - - 0.735 proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
22. SNW1 ENSGALG00000010501 17767 1.528 - - - - - - - 0.735 - 0.793 SNW domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16696]
23. GTF2E1 ENSGALG00000042320 7712 1.507 - - - - - - 0.768 - - 0.739 general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
24. GCN1L1 GCN1L1 4601 0.979 - - - - - - - 0.979 - -
25. EMG1 ENSGALG00000014568 8102 0.976 - - - - - - - 0.976 - - EMG1, N1-specific pseudouridine methyltransferase [Source:NCBI gene;Acc:418292]
26. ACOT13 ENSGALG00000013632 5550 0.974 - - - - - - - 0.974 - - acyl-CoA thioesterase 13 [Source:HGNC Symbol;Acc:HGNC:20999]
27. UTP20 ENSGALG00000011643 3012 0.974 - - - - - - - 0.974 - - UTP20, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:17897]
28. CDC7 ENSGALG00000006051 3996 0.973 - - - - - - - 0.973 - - cell division cycle 7 [Source:HGNC Symbol;Acc:HGNC:1745]
29. MGAT4B ENSGALG00000005924 2663 0.973 - - - - - - - 0.973 - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
30. MRPS36 ENSGALG00000014789 7584 0.973 - - - - - - - 0.973 - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
31. SFRP2 ENSGALG00000009241 4716 0.973 - - - - - - - 0.973 - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
32. MYBBP1A ENSGALG00000001363 10331 0.973 - - - - - - - 0.973 - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
33. JARID2 ENSGALG00000012702 4280 0.973 - - - - - - - 0.973 - - jumonji and AT-rich interaction domain containing 2 [Source:NCBI gene;Acc:420839]
34. CEPT1 ENSGALG00000000142 4219 0.973 - - - - - - - 0.973 - - choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
35. ATG13 ENSGALG00000008347 7374 0.971 - - - - - - - 0.971 - - autophagy related 13 [Source:HGNC Symbol;Acc:HGNC:29091]
36. TATDN1 ENSGALG00000041072 1585 0.971 - - - - - - - 0.971 - - TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]
37. LPAR1 ENSGALG00000015729 3874 0.971 - - - - - - - 0.971 - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
38. PMPCB ENSGALG00000008280 6357 0.97 - - - - - - - 0.970 - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
39. USP54 ENSGALG00000005232 2749 0.969 - - - - - - - 0.969 - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
40. HSBP1 ENSGALG00000043039 2365 0.969 - - - - - - - 0.969 - - heat shock factor binding protein 1 [Source:NCBI gene;Acc:415813]
41. RAB9A ENSGALG00000016579 3262 0.968 - - - - - - - 0.968 - - RAB9A, member RAS oncogene family [Source:NCBI gene;Acc:418635]
42. DFFA ENSGALG00000002820 2046 0.968 - - - - - - - 0.968 - - DNA fragmentation factor subunit alpha [Source:HGNC Symbol;Acc:HGNC:2772]
43. COPG2 ENSGALG00000008144 4542 0.968 - - - - - - - 0.968 - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
44. RPP38 ENSGALG00000008794 1057 0.968 - - - - - - - 0.968 - - ribonuclease P/MRP subunit p38 [Source:NCBI gene;Acc:420530]
45. RAB35 ENSGALG00000007308 6300 0.968 - - - - - - - 0.968 - - RAB35, member RAS oncogene family [Source:NCBI gene;Acc:416983]
46. WDR11 ENSGALG00000035013 3393 0.967 - - - - - - - 0.967 - - WD repeat domain 11 [Source:HGNC Symbol;Acc:HGNC:13831]
47. NFU1 ENSGALG00000030200 6882 0.967 - - - - - - - 0.967 - - NFU1 iron-sulfur cluster scaffold [Source:NCBI gene;Acc:419513]
48. TMF1 ENSGALG00000013408 3344 0.966 - - - - - - - 0.966 - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
49. WDFY1 ENSGALG00000005158 2512 0.965 - - - - - - - 0.965 - - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
50. USP25 ENSGALG00000015693 2567 0.965 - - - - - - - 0.965 - - ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:HGNC:12624]
51. CXorf56 ENSGALG00000008652 7848 0.965 - - - - - - - 0.965 - - chromosome X open reading frame 56 [Source:HGNC Symbol;Acc:HGNC:26239]
52. TMEM135 2283 0.965 - - - - - - - 0.965 - - transmembrane protein 135, transcript variant X4
53. TMEM168 ENSGALG00000009443 2452 0.965 - - - - - - - 0.965 - - transmembrane protein 168, transcript variant X1
54. WDR36 ENSGALG00000000247 11277 0.964 - - - - - - - 0.964 - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
55. FBXO28 ENSGALG00000009331 2871 0.964 - - - - - - - 0.964 - - F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]
56. CYP51A1 ENSGALG00000009365 6996 0.964 - - - - - - - 0.964 - - cytochrome P450 family 51 subfamily A member 1 [Source:NCBI gene;Acc:420548]
57. ENSGALG00000012564 ENSGALG00000012564 426 0.963 - - - - - - - 0.963 - -
58. CA9 ENSGALG00000021340 1431 0.963 - - - - - - - 0.963 - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
59. TGS1 ENSGALG00000015340 5897 0.962 - - - - - - - 0.962 - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
60. ITPR1 ENSGALG00000008294 1226 0.962 - - - - - - - 0.962 - - inositol 1,4,5-trisphosphate receptor type 1 [Source:NCBI gene;Acc:395412]
61. OXSR1 ENSGALG00000005979 2905 0.962 - - - - - - - 0.962 - - oxidative stress responsive 1
62. EIF2A ENSGALG00000010401 2201 0.962 - - - - - - - 0.962 - - eukaryotic translation initiation factor 2A [Source:NCBI gene;Acc:425042]
63. C3H6ORF154 C3H6ORF154 1078 0.961 - - - - - - - 0.961 - -
64. KIAA1191 ENSGALG00000003370 2599 0.961 - - - - - - - 0.961 - - KIAA1191 [Source:NCBI gene;Acc:416230]
65. DOCK7 6385 0.96 - - - - - - - 0.960 - - dedicator of cytokinesis 7, transcript variant X3
66. KLF5 ENSGALG00000016927 1080 0.96 - - - - - - - 0.960 - - Kruppel like factor 5 [Source:HGNC Symbol;Acc:HGNC:6349]
67. CTTN ENSGALG00000007700 709 0.96 - - - - - - - 0.960 - - cortactin [Source:NCBI gene;Acc:396455]
68. SLC16A2 ENSGALG00000007748 446 0.96 - - - - - - - 0.960 - - Gallus gallus solute carrier family 16 member 2 (SLC16A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321737]
69. MAN2A2 ENSGALG00000033790 2717 0.96 - - - - - - - 0.960 - - mannosidase alpha class 2A member 2 [Source:HGNC Symbol;Acc:HGNC:6825]
70. HES5 ENSGALG00000001141 6514 0.96 - - - - - - - 0.960 - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
71. TBC1D32 ENSGALG00000014876 681 0.96 - - - - - - - 0.960 - - TBC1 domain family member 32 [Source:HGNC Symbol;Acc:HGNC:21485]
72. IRF2BPL ENSGALG00000041616 2835 0.959 - - - - - - - 0.959 - - interferon regulatory factor 2 binding protein like [Source:HGNC Symbol;Acc:HGNC:14282]
73. AP1S2 ENSGALG00000016551 421 0.959 - - - - - - - 0.959 - - adaptor related protein complex 1 subunit sigma 2 [Source:NCBI gene;Acc:418621]
74. OSR2 ENSGALG00000037695 2010 0.958 - - - - - - - 0.958 - - odd-skipped related transciption factor 2 [Source:NCBI gene;Acc:771523]
75. CCM2 ENSGALG00000005612 323 0.958 - - - - - - - 0.958 - - CCM2 scaffold protein [Source:NCBI gene;Acc:420410]
76. MSC ENSGALG00000037777 1109 0.958 - - - - - - - 0.958 - - musculin [Source:HGNC Symbol;Acc:HGNC:7321]
77. ACSBG2 ENSGALG00000001749 1681 0.958 - - - - - - - 0.958 - - acyl-CoA synthetase bubblegum family member 2 [Source:NCBI gene;Acc:420090]
78. SLC38A11 ENSGALG00000011052 386 0.957 - - - - - - - 0.957 - - solute carrier family 38 member 11 [Source:HGNC Symbol;Acc:HGNC:26836]
79. GOLGA1 ENSGALG00000001025 334 0.957 - - - - - - - 0.957 - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
80. APC ENSGALG00000000220 1266 0.957 - - - - - - - 0.957 - - APC, WNT signaling pathway regulator, transcript variant X12
81. LMAN2 ENSGALG00000033232 11740 0.957 - - - - - - - 0.957 - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
82. LONRF2 ENSGALG00000016768 193 0.956 - - - - - - - 0.956 - - LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
83. PIGG ENSGALG00000015349 314 0.956 - - - - - - - 0.956 - - phosphatidylinositol glycan anchor biosynthesis class G [Source:HGNC Symbol;Acc:HGNC:25985]
84. FAM49B ENSGALG00000036490 7984 0.955 - - - - - - - 0.955 - - family with sequence similarity 49 member B [Source:HGNC Symbol;Acc:HGNC:25216]
85. MSANTD1 ENSGALG00000015628 154 0.955 - - - - - - - 0.955 - - Myb/SANT DNA binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33741]
86. RPN2 ENSGALG00000003815 18864 0.951 - - - - - - - 0.951 - - ribophorin II [Source:NCBI gene;Acc:419177]
87. SIGMAR1 ENSGALG00000028996 12267 0.95 - - - - - - - 0.950 - - sigma non-opioid intracellular receptor 1 [Source:NCBI gene;Acc:100859748]
88. HSD17B2 ENSGALG00000005467 275 0.947 - - - - - - - 0.947 - - hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]
89. UBR2 ENSGALG00000009906 7717 0.947 - - - - - - - 0.947 - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
90. AFAP1L2 ENSGALG00000008999 1305 0.943 - - - - - - - 0.943 - - actin filament associated protein 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25901]
91. ENSGALG00000000514 ENSGALG00000000514 9906 0.941 - - - - - - - 0.941 - -
92. FAM162A ENSGALG00000007378 8290 0.939 - - - - - - - 0.939 - - family with sequence similarity 162 member A [Source:HGNC Symbol;Acc:HGNC:17865]
93. POGLUT1 ENSGALG00000015480 12290 0.938 - - - - - - - 0.938 - - protein O-glucosyltransferase 1 [Source:NCBI gene;Acc:418455]
94. CDC23 ENSGALG00000007610 11945 0.934 - - - - - - - 0.934 - - cell division cycle 23 [Source:HGNC Symbol;Acc:HGNC:1724]
95. DDX47 ENSGALG00000011794 4255 0.933 - - - - - - - 0.933 - - DEAD-box helicase 47 [Source:NCBI gene;Acc:417959]
96. LYPD6B ENSGALG00000028759 831 0.93 - - - - - - - 0.930 - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
97. HECTD1 ENSGALG00000009946 1946 0.923 - - - - - - - 0.923 - - HECT domain E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:20157]
98. CRLS1 ENSGALG00000009214 8652 0.922 - - - - - - - 0.922 - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
99. OLFML3 ENSGALG00000001956 28633 0.922 - - - - - - - 0.922 - - olfactomedin like 3 [Source:NCBI gene;Acc:419882]
100. LATS1 ENSGALG00000012386 3455 0.919 - - - - - - - 0.919 - - large tumor suppressor kinase 1 [Source:HGNC Symbol;Acc:HGNC:6514]

There are 604 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA