Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for AP3B1

Gene Name Gene ID Reads Annotation
AP3B1 ENSGALG00000004390 387 adaptor related protein complex 3 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:566]











Genes with expression patterns similar to AP3B1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. AP3B1 ENSGALG00000004390 387 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 adaptor related protein complex 3 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:566]
2. ARHGEF3 ENSGALG00000005481 683 0.899 - - - - - - - - 0.899 - Rho guanine nucleotide exchange factor 3 [Source:NCBI gene;Acc:416000]
3. OTUD7B ENSGALG00000013348 38 0.857 - - - 0.857 - - - - - - OTU deubiquitinase 7B [Source:HGNC Symbol;Acc:HGNC:16683]
4. OXGR1 ENSGALG00000016891 13 0.854 - - - 0.854 - - - - - - oxoglutarate receptor 1
5. ZDHHC8 ENSGALG00000002124 35 0.854 - - - 0.854 - - - - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
6. HTR1E ENSGALG00000015826 11 0.849 - - - 0.849 - - - - - - 5-hydroxytryptamine receptor 1E [Source:HGNC Symbol;Acc:HGNC:5291]
7. ZPBP2 ENSGALG00000013484 14 0.849 - - - 0.849 - - - - - - zona pellucida binding protein 2 [Source:NCBI gene;Acc:404532]
8. CP ENSGALG00000030773 119 0.847 - - - 0.847 - - - - - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
9. NUP160 ENSGALG00000043074 46 0.846 - - - 0.846 - - - - - - nucleoporin 160 [Source:HGNC Symbol;Acc:HGNC:18017]
10. MTERFD3 MTERFD3 20 0.846 - - - 0.846 - - - - - -
11. VEPH1 ENSGALG00000009682 51 0.842 - - - 0.842 - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
12. KCTD17 ENSGALG00000042419 90 0.841 - - - 0.841 - - - - - - potassium channel tetramerization domain containing 17 [Source:HGNC Symbol;Acc:HGNC:25705]
13. MATN2 44 0.841 - - - 0.841 - - - - - - matrilin 2, transcript variant X9
14. TRAF2 ENSGALG00000042838 24 0.835 - - - 0.835 - - - - - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]
15. RGS16 ENSGALG00000033535 139 0.833 - - - 0.833 - - - - - - regulator of G-protein signaling 16 [Source:NCBI gene;Acc:424409]
16. CYP4A22 ENSGALG00000020688 741 0.832 - - - 0.832 - - - - - - Gallus gallus cytochrome P450 family 4 subfamily A member 22 (CYP4A22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329509]
17. ACOX2 ENSGALG00000007132 47 0.832 - - - 0.832 - - - - - - acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]
18. BEGAIN ENSGALG00000011236 35 0.831 - - - 0.831 - - - - - - brain enriched guanylate kinase associated [Source:HGNC Symbol;Acc:HGNC:24163]
19. GOPC ENSGALG00000014902 352 0.829 - - - 0.829 - - - - - - golgi associated PDZ and coiled-coil motif containing, transcript variant X2
20. ENSGALG00000028652 ENSGALG00000028652 65 0.826 - - - 0.826 - - - - - -
21. KITLG ENSGALG00000011206 71 0.826 - - - 0.826 - - - - - - KIT ligand [Source:NCBI gene;Acc:396028]
22. TVP23A ENSGALG00000007216 275 0.825 - - - - - - - - 0.825 - trans-golgi network vesicle protein 23 homolog A [Source:HGNC Symbol;Acc:HGNC:20398]
23. SMCR8 ENSGALG00000024082 44 0.824 - - - 0.824 - - - - - - Smith-Magenis syndrome chromosome region, candidate 8 [Source:HGNC Symbol;Acc:HGNC:17921]
24. NLGN4 NLGN4 283 0.82 - - - 0.820 - - - - - -
25. CCDC77 ENSGALG00000012987 1267 0.819 - - - - - - - - 0.819 - coiled-coil domain containing 77 [Source:HGNC Symbol;Acc:HGNC:28203]
26. ITGB1BP2 ENSGALG00000005493 628 0.818 - - - - - - - - 0.818 - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
27. gga-mir-454 ENSGALG00000033526 22 0.817 - - - 0.817 - - - - - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
28. RBPJ ENSGALG00000014365 119 0.816 - - - 0.816 - - - - - - recombination signal binding protein for immunoglobulin kappa J region [Source:HGNC Symbol;Acc:HGNC:5724]
29. RFESD ENSGALG00000014673 198 0.806 - - - 0.806 - - - - - - Rieske Fe-S domain containing [Source:HGNC Symbol;Acc:HGNC:29587]
30. ALS2 ENSGALG00000008415 2576 0.805 - - - - - - - - 0.805 - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
31. NOTCH1 ENSGALG00000002375 726 0.802 - - - 0.802 - - - - - - notch 1 [Source:NCBI gene;Acc:395655]
32. NUDT6 ENSGALG00000011834 1309 0.799 - - - - - - - - 0.799 - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
33. PALLD ENSGALG00000009650 10803 0.799 - - - 0.799 - - - - - - palladin, cytoskeletal associated protein [Source:HGNC Symbol;Acc:HGNC:17068]
34. PTPN9 ENSGALG00000001664 2309 0.798 - - - 0.798 - - - - - - protein tyrosine phosphatase, non-receptor type 9 [Source:NCBI gene;Acc:415308]
35. TAB2 ENSGALG00000012356 3467 0.797 - - - - - - - - 0.797 - TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17075]
36. SBF2 ENSGALG00000005716 134 0.797 - - - 0.797 - - - - - - SET binding factor 2 [Source:NCBI gene;Acc:423043]
37. CLP1 ENSGALG00000007370 2047 0.796 - - - - - - - - 0.796 - cleavage and polyadenylation factor I subunit 1 [Source:NCBI gene;Acc:423131]
38. CLEC3B ENSGALG00000030969 363 0.796 - - - 0.796 - - - - - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
39. PJA2 ENSGALG00000000264 1574 0.791 - - - - - - - - 0.791 - praja ring finger ubiquitin ligase 2, transcript variant X1
40. ARHGEF5 ENSGALG00000017276 32 0.789 - - - 0.789 - - - - - - Rho guanine nucleotide exchange factor 5, transcript variant X5
41. ENSGALG00000024035 ENSGALG00000024035 544 0.787 - - - 0.787 - - - - - -
42. PPIP5K2 ENSGALG00000015264 862 0.784 - - - - - - - - 0.784 - diphosphoinositol pentakisphosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:29035]
43. MFF ENSGALG00000003079 5289 0.783 - - - 0.783 - - - - - - mitochondrial fission factor [Source:HGNC Symbol;Acc:HGNC:24858]
44. ENSGALG00000025733 ENSGALG00000025733 197 0.783 - - - 0.783 - - - - - -
45. TNFAIP2 ENSGALG00000011446 32 0.782 - - - 0.782 - - - - - - TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
46. LAMA5 486 0.781 - - - - - - - - 0.781 - laminin subunit alpha 5, transcript variant X3
47. FMNL1 117 0.781 - - - 0.781 - - - - - - formin like 1
48. EFTUD1 EFTUD1 3455 0.78 - - - - - - - - 0.780 -
49. NCF1 ENSGALG00000001189 334 0.78 - - - - - - - - 0.780 - neutrophil cytosolic factor 1 [Source:NCBI gene;Acc:417485]
50. MYCN ENSGALG00000016462 1930 0.778 - - - - - - - - 0.778 - MYCN proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:421948]
51. SMPDL3B ENSGALG00000000737 223 0.776 - - - - - - - - 0.776 - sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]
52. MPZL2 ENSGALG00000007412 1068 0.775 - - - - - - - - 0.775 - myelin protein zero like 2 [Source:NCBI gene;Acc:419779]
53. CARKD CARKD 2914 0.771 - - - - - - - - 0.771 -
54. SMG7 ENSGALG00000004667 707 0.77 - - - 0.770 - - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
55. GGA.16412 GGA.16412 846 0.769 - - - - - - - - 0.769 -
56. DLG3 ENSGALG00000041900 3016 0.769 - - - - - - - - 0.769 - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
57. VPS33A ENSGALG00000004440 2030 0.767 - - - - - - - - 0.767 - VPS33A, CORVET/HOPS core subunit, transcript variant X1
58. FKBP8 ENSGALG00000003357 942 0.766 - - - - - - - - 0.766 - FK506 binding protein 8 [Source:NCBI gene;Acc:420123]
59. TMEM69 ENSGALG00000010279 716 0.765 - - - 0.765 - - - - - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
60. NMI ENSGALG00000012480 2172 0.764 - - - - - - - - 0.764 - N-myc and STAT interactor [Source:HGNC Symbol;Acc:HGNC:7854]
61. ADAMTS6 ENSGALG00000014751 1293 0.764 - - 0.764 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]
62. SLC7A6OS ENSGALG00000035575 2878 0.763 - - - - - - - - 0.763 - solute carrier family 7 member 6 opposite strand [Source:NCBI gene;Acc:415621]
63. SLC9A9 ENSGALG00000002374 179 0.76 - - - 0.760 - - - - - - solute carrier family 9 member A9 [Source:NCBI gene;Acc:424772]
64. CTTN ENSGALG00000007700 709 0.76 - - - - - - - - 0.760 - cortactin [Source:NCBI gene;Acc:396455]
65. FBXL17 ENSGALG00000000276 2443 0.76 - - - 0.760 - - - - - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
66. DYNLT3 ENSGALG00000016259 340 0.76 - - - - - - - - 0.760 - dynein light chain Tctex-type 3 [Source:NCBI gene;Acc:418580]
67. ENSGALG00000025895 ENSGALG00000025895 69 0.759 - - - 0.759 - - - - - -
68. BRMS1L ENSGALG00000010093 4964 0.759 - - - - - - - - 0.759 - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
69. PMEPA1 ENSGALG00000037780 349 0.759 - - - 0.759 - - - - - - prostate transmembrane protein, androgen induced 1 [Source:NCBI gene;Acc:428166]
70. C9orf64 ENSGALG00000012589 6097 0.755 - - - - - - - - 0.755 - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
71. ZNF608 ENSGALG00000005016 273 0.753 - - - - - - - - 0.753 - zinc finger protein 608 [Source:HGNC Symbol;Acc:HGNC:29238]
72. RPS6KA5 ENSGALG00000030580 218 0.753 - - - - - - - - 0.753 - ribosomal protein S6 kinase A5 [Source:NCBI gene;Acc:423408]
73. NBEAL1 ENSGALG00000008786 104 0.753 - - - - - - - - - 0.753 neurobeachin like 1 [Source:HGNC Symbol;Acc:HGNC:20681]
74. CGN ENSGALG00000000920 407 0.752 - - - - - - - - 0.752 - cingulin [Source:HGNC Symbol;Acc:HGNC:17429]
75. CDERMO-1 CDERMO-1 279 0.752 - - - - - - - - 0.752 -
76. CYBASC3 CYBASC3 1678 0.752 - - - 0.752 - - - - - -
77. FAM221A ENSGALG00000010977 695 0.751 - - - - - - - - 0.751 - family with sequence similarity 221 member A [Source:HGNC Symbol;Acc:HGNC:27977]
78. ANKRD54 ENSGALG00000012299 1588 0.751 - - - - - - - - 0.751 - ankyrin repeat domain 54, transcript variant X1
79. TMEM177 ENSGALG00000011593 311 0.75 - - - 0.750 - - - - - - transmembrane protein 177 [Source:HGNC Symbol;Acc:HGNC:28143]
80. ENSGALG00000019710 ENSGALG00000019710 212 0.75 - - - - - - - - 0.750 -
81. GALT ENSGALG00000026195 2002 0.75 - - - - - - - - 0.750 - galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]
82. VTI1A ENSGALG00000008880 279 0.749 - - - - - - - - 0.749 - vesicle transport through interaction with t-SNAREs 1A [Source:NCBI gene;Acc:770885]
83. SOSTDC1 ENSGALG00000036836 1081 0.748 - - - - - - - - 0.748 - sclerostin domain containing 1 [Source:NCBI gene;Acc:378800]
84. DMRT1 ENSGALG00000010160 425 0.748 - - - 0.748 - - - - - - doublesex and mab-3 related transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:2934]
85. ALS2CL ENSGALG00000005430 161 0.747 - - - 0.747 - - - - - - ALS2 C-terminal like [Source:HGNC Symbol;Acc:HGNC:20605]
86. AGPHD1 AGPHD1 716 0.747 - - - - - - - - - 0.747
87. SWIP-1 SWIP-1 6024 0.747 - - - - - - - - 0.747 -
88. PLA2R1 ENSGALG00000011149 1964 0.747 - - - 0.747 - - - - - - phospholipase A2 receptor 1 [Source:NCBI gene;Acc:404304]
89. GSTA GSTA 3130 0.747 - - - - - - - - 0.747 -
90. SERAC1 ENSGALG00000013732 24 0.746 - - - - - 0.746 - - - - serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
91. IPO8 ENSGALG00000012953 499 0.746 - - - - - - - - 0.746 - importin 8 [Source:HGNC Symbol;Acc:HGNC:9853]
92. REXO4 ENSGALG00000030609 2926 0.746 - - - - - - - - 0.746 - REX4 homolog, 3'-5' exonuclease [Source:HGNC Symbol;Acc:HGNC:12820]
93. ZP3 ENSGALG00000001559 48 0.746 - - - 0.746 - - - - - - zona pellucida sperm-binding protein 3 [Source:NCBI gene;Acc:378906]
94. Sep-11 Sep-11 2005 0.746 - - - 0.746 - - - - - -
95. JAZF1 ENSGALG00000030455 1425 0.745 - - - - - - - - 0.745 - JAZF zinc finger 1 [Source:NCBI gene;Acc:420633]
96. ME1 ENSGALG00000015849 1169 0.743 - - - 0.743 - - - - - - malic enzyme 1 [Source:NCBI gene;Acc:374189]
97. OGDHL ENSGALG00000002266 57 0.743 - - - 0.743 - - - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
98. ZNF143 ENSGALG00000005787 345 0.742 - - - 0.742 - - - - - - zinc finger protein 143 [Source:HGNC Symbol;Acc:HGNC:12928]
99. RAB22A ENSGALG00000007554 201 0.742 - - - 0.742 - - - - - - RAB22A, member RAS oncogene family [Source:NCBI gene;Acc:419318]
100. C6H10ORF46 C6H10ORF46 1107 0.741 - - - - - - - - 0.741 -

There are 104 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA