Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for AP1B1

Gene Name Gene ID Reads Annotation
AP1B1 ENSGALG00000042213 4828 adaptor related protein complex 1 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:554]











Genes with expression patterns similar to AP1B1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. AP1B1 ENSGALG00000042213 4828 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 adaptor related protein complex 1 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:554]
2. BMS1 ENSGALG00000002624 8339 1.794 - - - - - - 0.825 0.969 - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
3. GNG2 ENSGALG00000027629 9404 1.784 - - - - - - 0.818 0.966 - - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
4. PSMC3 ENSGALG00000008108 22922 1.728 - - - - - - 0.781 0.947 - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
5. ERBB2IP ERBB2IP 5800 1.712 - - - - - - 0.737 0.975 - -
6. RPAIN ENSGALG00000001666 2676 1.692 - - - - - - 0.718 0.974 - - RPA interacting protein [Source:HGNC Symbol;Acc:HGNC:28641]
7. AKAP2 ENSGALG00000015656 4310 1.687 - - - - - - 0.713 0.974 - - A kinase (PRKA) anchor protein 2 [Source:NCBI gene;Acc:100533110]
8. PTTG1IP ENSGALG00000005675, ENSGALG00000009044 10949 1.68 - - - - - - 0.704 0.976 - - pituitary tumor-transforming 1 interacting protein, transcript variant X1
9. MBNL3 ENSGALG00000032045 10980 1.676 - - - - - - 0.714 0.962 - - muscleblind like splicing regulator 3 [Source:NCBI gene;Acc:422233]
10. PSPC1 ENSGALG00000017142 13036 1.672 - - - - - - 0.764 0.908 - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
11. ACTR2 ENSGALG00000008779 17812 1.642 - - - - - - 0.751 0.891 - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
12. Sep-05 Sep-05 5887 1.596 - - - - - - 0.717 0.879 - -
13. PTEN ENSGALG00000003634 5048 1.566 - - - - - - 0.735 0.831 - - phosphatase and tensin homolog [Source:HGNC Symbol;Acc:HGNC:9588]
14. WDR51B WDR51B 5757 1.559 - - - - - - 0.782 0.777 - -
15. ENSGALG00000002903 ENSGALG00000002903 18304 1.543 - - - - - - 0.706 0.837 - -
16. BRP44 BRP44 17093 1.5 - - - - - - 0.781 0.719 - -
17. SP3 ENSGALG00000031796 8997 1.49 - - - - - - 0.720 0.770 - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
18. SGCB ENSGALG00000013968 3214 0.977 - - - - - - - 0.977 - - sarcoglycan beta [Source:NCBI gene;Acc:422760]
19. CENPJ ENSGALG00000017148 1415 0.976 - - - - - - - 0.976 - - centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
20. NCAPG2 ENSGALG00000006525 2319 0.976 - - - - - - - 0.976 - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
21. AMACR ENSGALG00000003326 2657 0.976 - - - - - - - 0.976 - - alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
22. TUBD1 ENSGALG00000005173 1364 0.975 - - - - - - - 0.975 - - tubulin delta 1 [Source:HGNC Symbol;Acc:HGNC:16811]
23. TAPA1 TAPA1 8669 0.975 - - - - - - - 0.975 - -
24. ACTA1 ENSGALG00000011086 2543 0.975 - - - - - - - 0.975 - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
25. LAMA5 486 0.975 - - - - - - - 0.975 - - laminin subunit alpha 5, transcript variant X3
26. RNF19B ENSGALG00000039716 662 0.975 - - - - - - - 0.975 - - ring finger protein 19B [Source:HGNC Symbol;Acc:HGNC:26886]
27. BYSL ENSGALG00000003467 7555 0.975 - - - - - - - 0.975 - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
28. VPRBP VPRBP 4037 0.975 - - - - - - - 0.975 - -
29. REPS2 ENSGALG00000016545 3347 0.975 - - - - - - - 0.975 - - RALBP1 associated Eps domain containing 2 [Source:NCBI gene;Acc:418617]
30. QSOX2 ENSGALG00000001758 638 0.975 - - - - - - - 0.975 - - quiescin sulfhydryl oxidase 2 [Source:HGNC Symbol;Acc:HGNC:30249]
31. CNTRL ENSGALG00000001513 1773 0.975 - - - - - - - 0.975 - - centriolin [Source:NCBI gene;Acc:417121]
32. SETD9 ENSGALG00000014719 5081 0.975 - - - - - - - 0.975 - - SET domain containing 9, transcript variant X2
33. GTF2H3 ENSGALG00000023682 9914 0.975 - - - - - - - 0.975 - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
34. LIMCH1 ENSGALG00000014258 1987 0.974 - - - - - - - 0.974 - - LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
35. SNX9 ENSGALG00000013710 5295 0.974 - - - - - - - 0.974 - - sorting nexin 9 [Source:HGNC Symbol;Acc:HGNC:14973]
36. ZNF318 ENSGALG00000034040 1758 0.974 - - - - - - - 0.974 - - zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
37. ANKRD46 ENSGALG00000041445 3791 0.974 - - - - - - - 0.974 - - ankyrin repeat domain 46, transcript variant X1
38. STX8 ENSGALG00000001238 7403 0.974 - - - - - - - 0.974 - - syntaxin 8 [Source:NCBI gene;Acc:417321]
39. GTF2A1 ENSGALG00000010576 4570 0.974 - - - - - - - 0.974 - - general transcription factor IIA subunit 1 [Source:NCBI gene;Acc:423389]
40. ANKRD10 ENSGALG00000030125 3611 0.973 - - - - - - - 0.973 - - ankyrin repeat domain 10 [Source:NCBI gene;Acc:418760]
41. NQO2 ENSGALG00000025747 2287 0.973 - - - - - - - 0.973 - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
42. TLCD2 ENSGALG00000021592 1166 0.973 - - - - - - - 0.973 - - TLC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:33522]
43. EDNRA ENSGALG00000010013 2472 0.973 - - - - - - - 0.973 - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
44. FRAS1 ENSGALG00000010316 5008 0.973 - - - - - - - 0.973 - - Fraser extracellular matrix complex subunit 1, transcript variant X2
45. MON2 ENSGALG00000009795 3868 0.973 - - - - - - - 0.973 - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:NCBI gene;Acc:417818]
46. WDHD1 ENSGALG00000012199 3570 0.971 - - - - - - - 0.971 - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
47. EVX1 ENSGALG00000037310 1974 0.971 - - - - - - - 0.971 - - even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
48. GPR27 ENSGALG00000027091 8111 0.971 - - - - - - - 0.971 - - G protein-coupled receptor 27
49. NAP1L1 ENSGALG00000010238 14506 0.971 - - - - - - - 0.971 - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
50. AMD1 ENSGALG00000039575 8900 0.97 - - - - - - - 0.970 - - adenosylmethionine decarboxylase 1 [Source:NCBI gene;Acc:421755]
51. SUPV3L1 ENSGALG00000004197 4141 0.97 - - - - - - - 0.970 - - Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
52. MRE11A MRE11A 5754 0.967 - - - - - - - 0.967 - -
53. RAD23B ENSGALG00000015540 10828 0.964 - - - - - - - 0.964 - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
54. MRPS35 ENSGALG00000036730 6327 0.963 - - - - - - - 0.963 - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
55. ACSF2 ENSGALG00000019768 2727 0.961 - - - - - - - 0.961 - - acyl-CoA synthetase family member 2 [Source:HGNC Symbol;Acc:HGNC:26101]
56. MRPS11 ENSGALG00000006777 16009 0.96 - - - - - - - 0.960 - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
57. NHP2L1 NHP2L1 12124 0.959 - - - - - - - 0.959 - -
58. SOS1 ENSGALG00000039450 3941 0.959 - - - - - - - 0.959 - - SOS Ras/Rac guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:11187]
59. SERPINE2 ENSGALG00000005135 16108 0.957 - - - - - - - 0.957 - - serpin family E member 2 [Source:NCBI gene;Acc:424805]
60. CTNNA1 ENSGALG00000002447 22379 0.954 - - - - - - - 0.954 - - catenin alpha 1 [Source:HGNC Symbol;Acc:HGNC:2509]
61. IST1 ENSGALG00000000811 10527 0.949 - - - - - - - 0.949 - - IST1, ESCRT-III associated factor [Source:HGNC Symbol;Acc:HGNC:28977]
62. COPS2 ENSGALG00000000404 8980 0.942 - - - - - - - 0.942 - - COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
63. ACE ENSGALG00000000498 1398 0.936 - - - - - - - 0.936 - - angiotensin I converting enzyme [Source:NCBI gene;Acc:419953]
64. DDX18 ENSGALG00000012147 12463 0.935 - - - - - - - 0.935 - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
65. POLE3 ENSGALG00000008873 9161 0.933 - - - - - - - 0.933 - - DNA polymerase epsilon 3, accessory subunit [Source:NCBI gene;Acc:417275]
66. MPHOSPH8 ENSGALG00000017145 6280 0.922 - - - - - - - 0.922 - - M-phase phosphoprotein 8 [Source:NCBI gene;Acc:418957]
67. C9orf78 ENSGALG00000004152 7140 0.92 - - - - - - - 0.920 - - chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:24932]
68. MND1 ENSGALG00000009212 11765 0.916 - - - - - - - 0.916 - - meiotic nuclear divisions 1 [Source:NCBI gene;Acc:422399]
69. ENSGALG00000014852 ENSGALG00000014852 15288 0.91 - - - - - - - 0.910 - -
70. HNRNPH1 HNRNPH1 8819 0.904 - - - - - - - 0.904 - -
71. MAB21L1 ENSGALG00000045052 1677 0.898 - - - - - - - 0.898 - - mab-21 like 1 [Source:NCBI gene;Acc:395208]
72. MOXD1 ENSGALG00000002911 8523 0.889 - - - - - - - 0.889 - - monooxygenase DBH like 1 [Source:NCBI gene;Acc:395333]
73. C11H16ORF80 C11H16ORF80 18673 0.885 - - - - - - 0.885 - - -
74. R3HDM1 ENSGALG00000012246 6580 0.884 - - - - - - 0.884 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
75. EXOSC3 ENSGALG00000002426 7255 0.876 - - - - - - - 0.876 - - exosome component 3 [Source:NCBI gene;Acc:423626]
76. TXNDC17 ENSGALG00000027950 45004 0.874 - - - - - - 0.874 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
77. PPP2R5D ENSGALG00000040005 6804 0.872 - - - - - - 0.872 - - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
78. MRPL2 ENSGALG00000008597 16500 0.871 - - - - - - 0.871 - - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
79. SMC4 ENSGALG00000009553 15715 0.869 - - - - - - 0.869 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
80. RPS6KA RPS6KA 6745 0.869 - - - - - - 0.869 - - -
81. SIVA1 ENSGALG00000011619 15130 0.86 - - - - - - 0.860 - - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
82. SNRNP27 ENSGALG00000013883 22212 0.858 - - - - - - 0.858 - - - small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
83. COMMD10 ENSGALG00000002308 7442 0.858 - - - - - - 0.858 - - - COMM domain containing 10 [Source:NCBI gene;Acc:427388]
84. WBSCR22 6082 0.857 - - - - - - 0.857 - - - Williams-Beuren syndrome chromosome region 22
85. LLPH ENSGALG00000019358 20976 0.857 - - - - - - 0.857 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
86. DAD1 ENSGALG00000035626 32604 0.856 - - - - - - 0.856 - - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
87. GABARAPL2 ENSGALG00000003208 9195 0.855 - - - - - - 0.855 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
88. GPI ENSGALG00000004956 40030 0.855 - - - - - - - 0.855 - - glucose-6-phosphate isomerase [Source:NCBI gene;Acc:415783]
89. YWHAZ ENSGALG00000031387 84985 0.855 - - - - - - 0.855 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
90. SNRNP40 ENSGALG00000000615 32298 0.855 - - - - - - 0.855 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
91. TMEM167A ENSGALG00000027332 13862 0.855 - - - - - - 0.855 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
92. NDUFB3 ENSGALG00000008239 15511 0.853 - - - - - - 0.853 - - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
93. C1QBP ENSGALG00000001654 34814 0.853 - - - - - - 0.853 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
94. LSM5 ENSGALG00000041625 22307 0.853 - - - - - - 0.853 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
95. NCDN ENSGALG00000002408 6180 0.851 - - - - - - 0.851 - - - neurochondrin [Source:NCBI gene;Acc:419633]
96. TSPAN3 ENSGALG00000002774 28811 0.85 - - - - - - - 0.850 - - tetraspanin 3 [Source:NCBI gene;Acc:415348]
97. MZT1 ENSGALG00000016932 9269 0.847 - - - - - - 0.847 - - - mitotic spindle organizing protein 1 [Source:NCBI gene;Acc:418822]
98. GLRX3 ENSGALG00000010464 22578 0.846 - - - - - - 0.846 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
99. CRLS1 ENSGALG00000009214 8652 0.845 - - - - - - 0.845 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
100. CHTF8 ENSGALG00000000632 7230 0.845 - - - - - - 0.845 - - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]

There are 658 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA