Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for AMD1

Gene Name Gene ID Reads Annotation
AMD1 ENSGALG00000039575 8900 adenosylmethionine decarboxylase 1 [Source:NCBI gene;Acc:421755]











Genes with expression patterns similar to AMD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. AMD1 ENSGALG00000039575 8900 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 adenosylmethionine decarboxylase 1 [Source:NCBI gene;Acc:421755]
2. COPS2 ENSGALG00000000404 8980 1.828 - - - - - - 0.871 0.957 - - COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
3. RAD23B ENSGALG00000015540 10828 1.737 - - - - - - 0.799 0.938 - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
4. SNX9 ENSGALG00000013710 5295 1.668 - - - - - - 0.742 0.926 - - sorting nexin 9 [Source:HGNC Symbol;Acc:HGNC:14973]
5. CHOCT-1 CHOCT-1 3422 1.453 - - - - - - 0.744 - - 0.709
6. ALDH5A1 ENSGALG00000032544 4924 1.425 - - - - - - 0.717 - 0.708 - aldehyde dehydrogenase 5 family member A1 [Source:HGNC Symbol;Acc:HGNC:408]
7. MRE11A MRE11A 5754 0.994 - - - - - - - 0.994 - -
8. AMACR ENSGALG00000003326 2657 0.985 - - - - - - - 0.985 - - alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
9. NAP1L1 ENSGALG00000010238 14506 0.985 - - - - - - - 0.985 - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
10. WDHD1 ENSGALG00000012199 3570 0.985 - - - - - - - 0.985 - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
11. GPR27 ENSGALG00000027091 8111 0.985 - - - - - - - 0.985 - - G protein-coupled receptor 27
12. BYSL ENSGALG00000003467 7555 0.985 - - - - - - - 0.985 - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
13. STX8 ENSGALG00000001238 7403 0.985 - - - - - - - 0.985 - - syntaxin 8 [Source:NCBI gene;Acc:417321]
14. TAPA1 TAPA1 8669 0.985 - - - - - - - 0.985 - -
15. ANKRD46 ENSGALG00000041445 3791 0.985 - - - - - - - 0.985 - - ankyrin repeat domain 46, transcript variant X1
16. FRAS1 ENSGALG00000010316 5008 0.984 - - - - - - - 0.984 - - Fraser extracellular matrix complex subunit 1, transcript variant X2
17. AKAP2 ENSGALG00000015656 4310 0.984 - - - - - - - 0.984 - - A kinase (PRKA) anchor protein 2 [Source:NCBI gene;Acc:100533110]
18. ERBB2IP ERBB2IP 5800 0.984 - - - - - - - 0.984 - -
19. NCAPG2 ENSGALG00000006525 2319 0.984 - - - - - - - 0.984 - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
20. VPRBP VPRBP 4037 0.984 - - - - - - - 0.984 - -
21. RPAIN ENSGALG00000001666 2676 0.984 - - - - - - - 0.984 - - RPA interacting protein [Source:HGNC Symbol;Acc:HGNC:28641]
22. PTTG1IP ENSGALG00000005675, ENSGALG00000009044 10949 0.984 - - - - - - - 0.984 - - pituitary tumor-transforming 1 interacting protein, transcript variant X1
23. EDNRA ENSGALG00000010013 2472 0.983 - - - - - - - 0.983 - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
24. SETD9 ENSGALG00000014719 5081 0.983 - - - - - - - 0.983 - - SET domain containing 9, transcript variant X2
25. MON2 ENSGALG00000009795 3868 0.983 - - - - - - - 0.983 - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:NCBI gene;Acc:417818]
26. CNTRL ENSGALG00000001513 1773 0.983 - - - - - - - 0.983 - - centriolin [Source:NCBI gene;Acc:417121]
27. SGCB ENSGALG00000013968 3214 0.983 - - - - - - - 0.983 - - sarcoglycan beta [Source:NCBI gene;Acc:422760]
28. TUBD1 ENSGALG00000005173 1364 0.983 - - - - - - - 0.983 - - tubulin delta 1 [Source:HGNC Symbol;Acc:HGNC:16811]
29. ACTA1 ENSGALG00000011086 2543 0.983 - - - - - - - 0.983 - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
30. GTF2H3 ENSGALG00000023682 9914 0.982 - - - - - - - 0.982 - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
31. CENPJ ENSGALG00000017148 1415 0.982 - - - - - - - 0.982 - - centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
32. REPS2 ENSGALG00000016545 3347 0.982 - - - - - - - 0.982 - - RALBP1 associated Eps domain containing 2 [Source:NCBI gene;Acc:418617]
33. LIMCH1 ENSGALG00000014258 1987 0.982 - - - - - - - 0.982 - - LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
34. ZNF318 ENSGALG00000034040 1758 0.982 - - - - - - - 0.982 - - zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
35. QSOX2 ENSGALG00000001758 638 0.981 - - - - - - - 0.981 - - quiescin sulfhydryl oxidase 2 [Source:HGNC Symbol;Acc:HGNC:30249]
36. TLCD2 ENSGALG00000021592 1166 0.981 - - - - - - - 0.981 - - TLC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:33522]
37. RNF19B ENSGALG00000039716 662 0.981 - - - - - - - 0.981 - - ring finger protein 19B [Source:HGNC Symbol;Acc:HGNC:26886]
38. GTF2A1 ENSGALG00000010576 4570 0.981 - - - - - - - 0.981 - - general transcription factor IIA subunit 1 [Source:NCBI gene;Acc:423389]
39. LAMA5 486 0.981 - - - - - - - 0.981 - - laminin subunit alpha 5, transcript variant X3
40. GNG2 ENSGALG00000027629 9404 0.98 - - - - - - - 0.980 - - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
41. SUPV3L1 ENSGALG00000004197 4141 0.98 - - - - - - - 0.980 - - Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
42. NQO2 ENSGALG00000025747 2287 0.98 - - - - - - - 0.980 - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
43. EVX1 ENSGALG00000037310 1974 0.98 - - - - - - - 0.980 - - even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
44. BMS1 ENSGALG00000002624 8339 0.98 - - - - - - - 0.980 - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
45. MRPS35 ENSGALG00000036730 6327 0.977 - - - - - - - 0.977 - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
46. MRPS11 ENSGALG00000006777 16009 0.976 - - - - - - - 0.976 - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
47. SERPINE2 ENSGALG00000005135 16108 0.971 - - - - - - - 0.971 - - serpin family E member 2 [Source:NCBI gene;Acc:424805]
48. ACSF2 ENSGALG00000019768 2727 0.97 - - - - - - - 0.970 - - acyl-CoA synthetase family member 2 [Source:HGNC Symbol;Acc:HGNC:26101]
49. AP1B1 ENSGALG00000042213 4828 0.97 - - - - - - - 0.970 - - adaptor related protein complex 1 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:554]
50. SOS1 ENSGALG00000039450 3941 0.969 - - - - - - - 0.969 - - SOS Ras/Rac guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:11187]
51. IST1 ENSGALG00000000811 10527 0.967 - - - - - - - 0.967 - - IST1, ESCRT-III associated factor [Source:HGNC Symbol;Acc:HGNC:28977]
52. CTNNA1 ENSGALG00000002447 22379 0.966 - - - - - - - 0.966 - - catenin alpha 1 [Source:HGNC Symbol;Acc:HGNC:2509]
53. ACE ENSGALG00000000498 1398 0.962 - - - - - - - 0.962 - - angiotensin I converting enzyme [Source:NCBI gene;Acc:419953]
54. ENSGALG00000014852 ENSGALG00000014852 15288 0.954 - - - - - - - 0.954 - -
55. MND1 ENSGALG00000009212 11765 0.944 - - - - - - - 0.944 - - meiotic nuclear divisions 1 [Source:NCBI gene;Acc:422399]
56. ACTR2 ENSGALG00000008779 17812 0.932 - - - - - - - 0.932 - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
57. C9orf78 ENSGALG00000004152 7140 0.93 - - - - - - - 0.930 - - chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:24932]
58. MPHOSPH8 ENSGALG00000017145 6280 0.929 - - - - - - - 0.929 - - M-phase phosphoprotein 8 [Source:NCBI gene;Acc:418957]
59. PSPC1 ENSGALG00000017142 13036 0.923 - - - - - - - 0.923 - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
60. MAB21L1 ENSGALG00000045052 1677 0.918 - - - - - - - 0.918 - - mab-21 like 1 [Source:NCBI gene;Acc:395208]
61. HNRNPH1 HNRNPH1 8819 0.916 - - - - - - - 0.916 - -
62. ANKRD10 ENSGALG00000030125 3611 0.915 - - - - - - - 0.915 - - ankyrin repeat domain 10 [Source:NCBI gene;Acc:418760]
63. MBNL3 ENSGALG00000032045 10980 0.914 - - - - - - - 0.914 - - muscleblind like splicing regulator 3 [Source:NCBI gene;Acc:422233]
64. NHP2L1 NHP2L1 12124 0.904 - - - - - - - 0.904 - -
65. MOXD1 ENSGALG00000002911 8523 0.903 - - - - - - - 0.903 - - monooxygenase DBH like 1 [Source:NCBI gene;Acc:395333]
66. PSMC3 ENSGALG00000008108 22922 0.891 - - - - - - - 0.891 - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
67. Sep-05 Sep-05 5887 0.888 - - - - - - - 0.888 - -
68. TSPAN3 ENSGALG00000002774 28811 0.887 - - - - - - - 0.887 - - tetraspanin 3 [Source:NCBI gene;Acc:415348]
69. DDX18 ENSGALG00000012147 12463 0.886 - - - - - - - 0.886 - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
70. EXOSC3 ENSGALG00000002426 7255 0.883 - - - - - - - 0.883 - - exosome component 3 [Source:NCBI gene;Acc:423626]
71. POLE3 ENSGALG00000008873 9161 0.874 - - - - - - - 0.874 - - DNA polymerase epsilon 3, accessory subunit [Source:NCBI gene;Acc:417275]
72. GPI ENSGALG00000004956 40030 0.871 - - - - - - - 0.871 - - glucose-6-phosphate isomerase [Source:NCBI gene;Acc:415783]
73. TSNAX ENSGALG00000037177 3246 0.86 - - - - - - - 0.860 - - translin associated factor X [Source:NCBI gene;Acc:421526]
74. ETV4 ENSGALG00000036678 2424 0.856 - - - - - - 0.856 - - - ETS variant 4 [Source:HGNC Symbol;Acc:HGNC:3493]
75. KMT2C 6306 0.853 - - - - - - - - 0.853 - lysine methyltransferase 2C, transcript variant X14
76. Sep-09 Sep-09 4723 0.852 - - - - - - 0.852 - - -
77. DGCR6 ENSGALG00000027369 7882 0.852 - - - - - - - 0.852 - - DiGeorge syndrome critical region gene 6 [Source:NCBI gene;Acc:395907]
78. ENSGALG00000002903 ENSGALG00000002903 18304 0.851 - - - - - - - 0.851 - -
79. RRP9 ENSGALG00000043359 9747 0.85 - - - - - - 0.850 - - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
80. MTDH ENSGALG00000034050 9525 0.844 - - - - - - 0.844 - - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
81. PTEN ENSGALG00000003634 5048 0.843 - - - - - - - 0.843 - - phosphatase and tensin homolog [Source:HGNC Symbol;Acc:HGNC:9588]
82. ZFR ENSGALG00000003235 8466 0.842 - - - - - - 0.842 - - - zinc finger RNA binding protein, transcript variant X3
83. CHST6 ENSGALG00000000913, ENSGALG00000036545 7526 0.842 - - - - - - - 0.842 - - carbohydrate sulfotransferase 6 [Source:NCBI gene;Acc:770257]
84. UBQLN1 ENSGALG00000012585 5158 0.841 - - - - - - 0.841 - - - ubiquilin 1 [Source:HGNC Symbol;Acc:HGNC:12508]
85. WDR92 ENSGALG00000008760 3934 0.838 - - - - - - 0.838 - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
86. LYAR ENSGALG00000015000 10756 0.836 - - - - - - 0.836 - - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
87. HTATSF1 ENSGALG00000006410 3526 0.835 - - - - - - 0.835 - - - HIV-1 Tat specific factor 1 [Source:HGNC Symbol;Acc:HGNC:5276]
88. PPP2CA ENSGALG00000006462 26306 0.834 - - - - - - - 0.834 - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
89. CPSF6 ENSGALG00000019355 7634 0.833 - - - - - - 0.833 - - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
90. UFD1L 12964 0.833 - - - - - - 0.833 - - - ubiquitin fusion degradation 1 like (yeast)
91. SBNO1 ENSGALG00000003392 6731 0.831 - - - - - - 0.831 - - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
92. LYPLA1 ENSGALG00000040421 14720 0.831 - - - - - - 0.831 - - - lysophospholipase I [Source:HGNC Symbol;Acc:HGNC:6737]
93. JARID2 ENSGALG00000012702 4280 0.83 - - - - - - 0.830 - - - jumonji and AT-rich interaction domain containing 2 [Source:NCBI gene;Acc:420839]
94. RCHY1 ENSGALG00000023335 12947 0.83 - - - - - - 0.830 - - - ring finger and CHY zinc finger domain containing 1 [Source:NCBI gene;Acc:771726]
95. HAUS1 ENSGALG00000040397 6195 0.828 - - - - - - 0.828 - - - HAUS augmin like complex subunit 1 [Source:NCBI gene;Acc:416380]
96. NUMB ENSGALG00000009300 4220 0.827 - - - - - - 0.827 - - - NUMB, endocytic adaptor protein [Source:NCBI gene;Acc:395639]
97. SELK SELK 15022 0.827 - - - - - - - 0.827 - -
98. XPO1 ENSGALG00000029476 9526 0.826 - - - - - - 0.826 - - - exportin 1 [Source:NCBI gene;Acc:421192]
99. RNF219 ENSGALG00000016911 4458 0.824 - - - - - - 0.824 - - - ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
100. NIPA2 ENSGALG00000016737 3792 0.823 - - - - - - 0.823 - - - NIPA magnesium transporter 2 [Source:NCBI gene;Acc:418680]

There are 267 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA