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Results for AMBRA1_1

Gene Name Gene ID Reads Annotation
AMBRA1_1 AMBRA1_1 2179










Genes with expression patterns similar to AMBRA1_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. AMBRA1_1 AMBRA1_1 2179 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. rerea ENSDARG00000077353 4162 1.851 - - - 0.997 - - 0.854 - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
3. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.84 - - - 0.994 - - 0.846 - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
4. tox ENSDARG00000032317 9126 1.801 - 0.809 - 0.992 - - - - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
5. slmo2 slmo2 5559 1.753 - - - 0.996 - - 0.757 - -
6. AGO1 ENSDARG00000092644 4521 1.742 - - - 0.992 - - - - 0.750 argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
7. eif2s3 ENSDARG00000008292 17051 1.727 - 0.750 - 0.977 - - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
8. chd4b ENSDARG00000025789 14299 1.628 - 0.727 - 0.901 - - - - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
9. ywhaz ENSDARG00000032575 15257 1.577 - - - 0.843 - - 0.734 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-8554]
10. ccdc12 ENSDARG00000023003, ENSDARG00000113770 1731 1.553 - 0.724 - - - - 0.829 - - coiled-coil domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-040801-108]
11. TNKS TNKS 2775 1.518 - - - - - 0.753 0.765 - -
12. arhgap11a ENSDARG00000100019 1642 1.507 - - - - - - 0.776 0.731 - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
13. kdm6a ENSDARG00000061759 1154 1.506 - 0.788 - - - - - - 0.718 lysine (K)-specific demethylase 6A [Source:ZFIN;Acc:ZDB-GENE-081105-56]
14. tcap ENSDARG00000007344 276 1.502 - - - - - 0.764 0.738 - - titin-cap (telethonin) [Source:ZFIN;Acc:ZDB-GENE-070501-5]
15. prmt1 ENSDARG00000010246 11311 1.499 - 0.786 - - - - 0.713 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
16. abca1a ENSDARG00000074635 1085 1.492 - - - - - 0.739 0.753 - - ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
17. nin ENSDARG00000060298 1558 1.485 - - - - - - 0.739 0.746 - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
18. vps45 ENSDARG00000061180 791 1.481 - - - - - 0.755 0.726 - - vacuolar protein sorting 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-526]
19. adam17a ENSDARG00000043213 1305 1.48 0.769 - - - - - 0.711 - - ADAM metallopeptidase domain 17a [Source:ZFIN;Acc:ZDB-GENE-030131-2862]
20. kdm5c ENSDARG00000006124 4389 1.477 - 0.736 - - - - - 0.741 - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
21. dennd5a ENSDARG00000017006 3426 1.466 - 0.725 - - - - 0.741 - - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
22. polr2gl ENSDARG00000056127 1771 1.466 - 0.702 - - - - 0.764 - - polymerase (RNA) II (DNA directed) polypeptide G-like [Source:ZFIN;Acc:ZDB-GENE-030131-2808]
23. LIMD1 LIMD1 1306 1.465 - 0.753 - - - 0.712 - - -
24. fam60a 825 1.462 - - - - - 0.735 0.727 - - family with sequence similarity 60, member A
25. ccdc85b ENSDARG00000061543 1309 1.45 - - - - - 0.731 - 0.719 - coiled-coil domain containing 85B [Source:ZFIN;Acc:ZDB-GENE-060130-56]
26. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.445 - 0.701 - - - 0.744 - - - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
27. itpkca ENSDARG00000002994 710 1.439 - 0.732 - - - - 0.707 - - inositol-trisphosphate 3-kinase Ca [Source:ZFIN;Acc:ZDB-GENE-030131-6009]
28. phf17 phf17 790 1.438 - 0.718 - - - - 0.720 - -
29. polb ENSDARG00000003749 2049 1.431 - - - - - 0.727 - - 0.704 polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
30. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 1.428 - 0.707 - - - 0.721 - - - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
31. mapkapk5 ENSDARG00000028082 443 1.415 - 0.704 - - - - 0.711 - - mitogen-activated protein kinase-activated protein kinase 5 [Source:ZFIN;Acc:ZDB-GENE-040718-25]
32. CU929431.1 CU929431.1 2234 1 - - - 1.000 - - - - -
33. C3H19orf43 C3H19orf43 2961 1 - - - 1.000 - - - - -
34. nkrf ENSDARG00000100536 1873 0.999 - - - 0.999 - - - - - NFKB repressing factor [Source:ZFIN;Acc:ZDB-GENE-030616-73]
35. camsap2 camsap2 1448 0.999 - - - 0.999 - - - - -
36. pnpla7a ENSDARG00000062986 1793 0.999 - - - 0.999 - - - - - patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]
37. map3k1 ENSDARG00000098405 3043 0.999 - - - 0.999 - - - - - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
38. EPT1 EPT1 1912 0.999 - - - 0.999 - - - - -
39. b3gnt5b ENSDARG00000004396 1152 0.999 - - - 0.999 - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5b [Source:ZFIN;Acc:ZDB-GENE-041010-166]
40. hoxb4a ENSDARG00000013533 3857 0.999 - - - 0.999 - - - - - homeobox B4a [Source:ZFIN;Acc:ZDB-GENE-990415-105]
41. slc15a4 ENSDARG00000102612 1096 0.999 - - - 0.999 - - - - - solute carrier family 15 (oligopeptide transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1047]
42. pycr1 pycr1 1258 0.999 - - - 0.999 - - - - -
43. camkmt ENSDARG00000095224 1204 0.999 - - - 0.999 - - - - - calmodulin-lysine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-090313-49]
44. dre-mir-26a-2 ENSDARG00000086601 1267 0.999 - - - 0.999 - - - - - dre-mir-26a-2 [Source:miRBase;Acc:MI0001925]
45. ppp6c ENSDARG00000002949 2948 0.999 - - - 0.999 - - - - - protein phosphatase 6, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-949]
46. tchp ENSDARG00000035605 1695 0.999 - - - 0.999 - - - - - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
47. FAM35A FAM35A 1091 0.999 - - - 0.999 - - - - -
48. herpud2 ENSDARG00000021033 1800 0.999 - - - 0.999 - - - - - HERPUD family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-868]
49. alas1 ENSDARG00000021059 4892 0.999 - - - 0.999 - - - - - aminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
50. mertk mertk 1232 0.999 - - - 0.999 - - - - -
51. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 0.999 - - - 0.999 - - - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
52. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 0.998 - - - 0.998 - - - - - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
53. mpi ENSDARG00000030786 3052 0.998 - - - 0.998 - - - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
54. dcxr ENSDARG00000079271 3289 0.998 - - - 0.998 - - - - - dicarbonyl/L-xylulose reductase [Source:ZFIN;Acc:ZDB-GENE-030131-7002]
55. rhoae rhoae 4047 0.998 - - - 0.998 - - - - -
56. ARHGAP23 ARHGAP23 3946 0.998 - - - 0.998 - - - - -
57. CU463857.1 CU463857.1 5541 0.998 - - - 0.998 - - - - -
58. CR388095.3 CR388095.3 2548 0.998 - - - 0.998 - - - - -
59. idh3g ENSDARG00000023648 4877 0.998 - - - 0.998 - - - - - isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
60. EIF1B ENSDARG00000029445 5034 0.998 - - - 0.998 - - - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
61. serbp1a ENSDARG00000074242 10818 0.998 - - - 0.998 - - - - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
62. blcap ENSDARG00000052073 8646 0.997 - - - 0.997 - - - - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
63. fermt2 ENSDARG00000020242 9351 0.997 - - - 0.997 - - - - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
64. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 0.997 - - - 0.997 - - - - - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
65. gap43 ENSDARG00000099744 4114 0.997 - - - 0.997 - - - - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
66. pcmt ENSDARG00000015201 5132 0.996 - - - 0.996 - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
67. acsl3b ENSDARG00000014674 3748 0.996 - - - 0.996 - - - - - acyl-CoA synthetase long chain family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-492]
68. txndc5 ENSDARG00000009342 5387 0.996 - - - 0.996 - - - - - thioredoxin domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1951]
69. ADAMTS3 ENSDARG00000060127 2839 0.996 - - - 0.996 - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
70. CNDP1 CNDP1 6456 0.996 - - - 0.996 - - - - -
71. prpf40a ENSDARG00000058467 6565 0.996 - - - 0.996 - - - - - PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
72. zgc:100919 zgc:100919 7746 0.996 - - - 0.996 - - - - -
73. SERBP1 SERBP1 9276 0.995 - - - 0.995 - - - - -
74. smc1al ENSDARG00000058203 8838 0.994 - - - 0.994 - - - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
75. cul4b ENSDARG00000060510 6053 0.993 - - - 0.993 - - - - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
76. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 0.99 - - - 0.990 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
77. tuba1c ENSDARG00000055216 8384 0.99 - - - 0.990 - - - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
78. tomm5 ENSDARG00000068265 11813 0.988 - - - 0.988 - - - - - translocase of outer mitochondrial membrane 5 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040724-90]
79. myom1a ENSDARG00000061249 10230 0.987 - - - 0.987 - - - - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
80. fahd2a ENSDARG00000103759 9581 0.978 - - - 0.978 - - - - - fumarylacetoacetate hydrolase domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-040426-2499]
81. hmgb1b ENSDARG00000030479 10398 0.977 - - - 0.977 - - - - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
82. serpina1 ENSDARG00000090286 8108 0.977 - - - 0.977 - - - - - serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1421]
83. col18a1 col18a1 20555 0.968 - - - 0.968 - - - - -
84. ywhabb ENSDARG00000075758 23104 0.966 - - - 0.966 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
85. zgc:56493 ENSDARG00000031435 33407 0.966 - - - 0.966 - - - - - zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
86. rpl13 ENSDARG00000099380 20663 0.965 - - - 0.965 - - - - - ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-031007-1]
87. eif1b ENSDARG00000012688 34711 0.957 - - - 0.957 - - - - - eukaryotic translation initiation factor 1B [Source:ZFIN;Acc:ZDB-GENE-030131-956]
88. rpl5a ENSDARG00000020197 35209 0.926 - - - 0.926 - - - - - ribosomal protein L5a [Source:ZFIN;Acc:ZDB-GENE-030131-5161]
89. rbm4.3 ENSDARG00000022129 28571 0.911 - - - 0.911 - - - - - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
90. tceb1b 14935 0.904 - - - 0.904 - - - - - transcription elongation factor B (SIII), polypeptide 1b
91. mcm2 ENSDARG00000102798 8148 0.899 - - - 0.899 - - - - - minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
92. UBC ENSDARG00000102632 39051 0.888 - - - 0.888 - - - - - ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
93. dkc1 ENSDARG00000016484 7088 0.88 - - - - - - 0.880 - - dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
94. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 0.876 - - - - - - 0.876 - - phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
95. rps29 ENSDARG00000041232 71334 0.872 - - - 0.872 - - - - - ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
96. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 0.869 - - - - - - 0.869 - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
97. osbpl10 osbpl10 836 0.868 - - - - - - 0.868 - -
98. tnrc6b ENSDARG00000074161 4597 0.867 - - - - - - 0.867 - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
99. dtna ENSDARG00000031015 1746 0.865 - - - - - 0.865 - - - dystrobrevin, alpha [Source:ZFIN;Acc:ZDB-GENE-070117-2]
100. pabpc1a ENSDARG00000017219 95045 0.864 - - - 0.864 - - - - - poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]

There are 982 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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