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Results for AMBRA1

Gene Name Gene ID Reads Annotation
AMBRA1 ENSGALG00000008358 2865 autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]











Genes with expression patterns similar to AMBRA1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. AMBRA1 ENSGALG00000008358 2865 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
2. TMEM242 ENSGALG00000013689 377 1.698 - - 0.948 - - - - - 0.750 - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
3. GTF2H2 ENSGALG00000002399 2361 1.679 - - 0.957 - - - 0.722 - - - general transcription factor IIH subunit 2, transcript variant X2
4. LGR4 ENSGALG00000040834 5529 1.675 - - 0.867 - - - 0.808 - - - leucine rich repeat containing G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:13299]
5. RFK ENSGALG00000033558 1364 1.673 - - 0.951 - - - 0.722 - - - riboflavin kinase, transcript variant X3
6. AMFR ENSGALG00000003107 6560 1.655 - - 0.923 - - - - 0.732 - - autocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]
7. ATP6V0A2 ENSGALG00000003194 4824 1.644 - - 0.897 - - - 0.747 - - - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
8. NCAPD2 ENSGALG00000039448 8658 1.633 - - 0.875 - - - 0.758 - - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
9. UBR2 ENSGALG00000009906 7717 1.63 - - 0.904 - - - 0.726 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
10. PANK1 ENSGALG00000006431 2910 1.629 - - 0.877 - - - - 0.752 - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
11. SMC4 ENSGALG00000009553 15715 1.592 - - 0.846 - - - 0.746 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
12. NAA30 ENSGALG00000012098 4681 1.582 - - 0.882 - - - 0.700 - - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
13. WSB2 ENSGALG00000008151 13246 1.578 - - 0.836 - - - - 0.742 - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
14. URM1 ENSGALG00000004971 17880 1.568 - - 0.865 - - - - 0.703 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
15. TBC1D4 ENSGALG00000016925 2961 1.554 - - - - - - - 0.711 0.843 - TBC1 domain family member 4 [Source:HGNC Symbol;Acc:HGNC:19165]
16. SPCS3 ENSGALG00000010839 19106 1.534 - - 0.799 - - - 0.735 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
17. CHMP4B ENSGALG00000002095 17422 1.532 - - 0.830 - - - - 0.702 - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
18. BMS1 ENSGALG00000002624 8339 1.531 - - 0.797 - - - 0.734 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
19. NXT2 ENSGALG00000008092 2477 1.53 - - - - - - 0.776 - 0.754 - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
20. GSPT1 15580 1.518 - - 0.790 - - - 0.728 - - - G1 to S phase transition 1, transcript variant X1
21. GABARAPL2 ENSGALG00000003208 9195 1.508 - - 0.780 - - - 0.728 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
22. CHN1 ENSGALG00000009293 6415 1.504 - - 0.767 - - - 0.737 - - - chimerin 1 [Source:NCBI gene;Acc:429021]
23. BNIP3L ENSGALG00000043405 10316 1.497 - - 0.751 - - - 0.746 - - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
24. FARP1 ENSGALG00000016886 13132 1.497 - - 0.737 - - - 0.760 - - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
25. AHCTF1 ENSGALG00000010630 4809 1.49 - - 0.723 - - - 0.767 - - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
26. DNM1L ENSGALG00000012929 6174 1.472 - - 0.757 - - - - 0.715 - - dynamin 1 like [Source:NCBI gene;Acc:418132]
27. SCML2 ENSGALG00000016537 9348 1.451 - - 0.717 - - - 0.734 - - - Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]
28. PSMB2 ENSGALG00000026421 51885 1.447 - - 0.723 - - - 0.724 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
29. RELL1 ENSGALG00000014336 2950 1.437 - - - - - - 0.703 - 0.734 - RELT like 1 [Source:NCBI gene;Acc:422795]
30. TARDBP ENSGALG00000002906 24748 1.437 - - 0.721 - - - 0.716 - - - TAR DNA binding protein [Source:NCBI gene;Acc:419453]
31. TGFBI ENSGALG00000029429 2306 1.428 - - 0.723 - - - 0.705 - - - transforming growth factor beta induced [Source:NCBI gene;Acc:395897]
32. LCLAT1 ENSGALG00000009056 5207 1.421 - - - - - - 0.701 0.720 - - lysocardiolipin acyltransferase 1 [Source:NCBI gene;Acc:421303]
33. IFT57 ENSGALG00000015356 5540 0.959 - - 0.959 - - - - - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
34. TCTN2 ENSGALG00000023683 3596 0.958 - - 0.958 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
35. IFT81 ENSGALG00000003854 2534 0.957 - - 0.957 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
36. F2R ENSGALG00000014983 106 0.957 - - 0.957 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
37. ATP8B4 ENSGALG00000002326 456 0.956 - - 0.956 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
38. RQCD1 RQCD1 110 0.956 - - 0.956 - - - - - - -
39. SOBP ENSGALG00000043047 147 0.955 - - 0.955 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
40. CDC14B ENSGALG00000012627 110 0.955 - - 0.955 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
41. AKAP10 ENSGALG00000004679 103 0.955 - - 0.955 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
42. ENSGALG00000004703 ENSGALG00000004703 112 0.954 - - 0.954 - - - - - - -
43. MLLT3 ENSGALG00000015078 502 0.954 - - 0.954 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
44. KCTD3 ENSGALG00000009678 335 0.954 - - 0.954 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
45. PTDSS2 ENSGALG00000004300 682 0.954 - - 0.954 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
46. RPS6KB1 ENSGALG00000005198 169 0.954 - - 0.954 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
47. ENSGALG00000028964 ENSGALG00000028964 46 0.954 - - 0.954 - - - - - - -
48. ENSGALG00000020103 ENSGALG00000020103 64 0.954 - - 0.954 - - - - - - -
49. GDPD4 ENSGALG00000000690 824 0.954 - - 0.954 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
50. BBS5 ENSGALG00000009846 344 0.954 - - 0.954 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
51. CHAMP1 ENSGALG00000016813 508 0.954 - - 0.954 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
52. MED12 ENSGALG00000036322 814 0.953 - - 0.953 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
53. SLC3A1 ENSGALG00000009973 608 0.953 - - 0.953 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
54. ITGB4 ENSGALG00000002389 44 0.953 - - 0.953 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
55. TDRD6 48 0.953 - - 0.953 - - - - - - - tudor domain containing 6
56. ENSGALG00000002020 ENSGALG00000002020 183 0.953 - - 0.953 - - - - - - -
57. UEVLD ENSGALG00000006342 164 0.953 - - 0.953 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
58. SMARCAD1 ENSGALG00000037339 149 0.953 - - 0.953 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
59. U4 U4 69 0.953 - - 0.953 - - - - - - -
60. AKT3 ENSGALG00000034081 866 0.953 - - 0.953 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]
61. MRC2 ENSGALG00000000461 48 0.953 - - 0.953 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
62. ABCC3 ENSGALG00000007522 340 0.952 - - 0.952 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
63. RAD54L2 ENSGALG00000003243 187 0.952 - - 0.952 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
64. ENSGALG00000008689 ENSGALG00000008689 232 0.952 - - 0.952 - - - - - - -
65. RECQL ENSGALG00000013174 1323 0.952 - - 0.952 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
66. OSGIN2 ENSGALG00000042840 83 0.952 - - 0.952 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
67. FBXL5 ENSGALG00000014510 245 0.952 - - 0.952 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
68. ATP10D ENSGALG00000014192 94 0.952 - - 0.952 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
69. DBN1 ENSGALG00000033405 216 0.952 - - 0.952 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
70. SZT2 ENSGALG00000028561 255 0.951 - - 0.951 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
71. RALGDS ENSGALG00000003412 4478 0.951 - - 0.951 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
72. CEP104 ENSGALG00000000978 1130 0.951 - - 0.951 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
73. CLEC16A ENSGALG00000007167 66 0.95 - - 0.950 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
74. PRUNE PRUNE 452 0.949 - - 0.949 - - - - - - -
75. NXPE3 ENSGALG00000015344 111 0.949 - - 0.949 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
76. LRRC42 ENSGALG00000010743 384 0.949 - - 0.949 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
77. L3MBTL3 ENSGALG00000034030 113 0.948 - - 0.948 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
78. ATF7IP ENSGALG00000011814 1571 0.948 - - 0.948 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
79. ITM2B ENSGALG00000016996 1112 0.947 - - 0.947 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
80. TRIM13 ENSGALG00000017011 92 0.947 - - 0.947 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
81. CAMSAP1 ENSGALG00000001692 2617 0.946 - - 0.946 - - - - - - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
82. LRRC71 ENSGALG00000027351 695 0.945 - - 0.945 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
83. GFER ENSGALG00000005579 1367 0.944 - - 0.944 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
84. ABCE1 ENSGALG00000009961 958 0.944 - - 0.944 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
85. ADK ENSGALG00000005057 199 0.944 - - 0.944 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
86. WAPAL WAPAL 625 0.943 - - 0.943 - - - - - - -
87. HPS5 ENSGALG00000027716 2466 0.942 - - 0.942 - - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
88. AASDHPPT ENSGALG00000027981 1017 0.942 - - 0.942 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
89. FAM134C 860 0.941 - - 0.941 - - - - - - - family with sequence similarity 134 member C
90. SGCE ENSGALG00000009670 3070 0.941 - - 0.941 - - - - - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
91. SNX14 ENSGALG00000015831 2554 0.94 - - 0.940 - - - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
92. RRN3 ENSGALG00000041989 3934 0.94 - - 0.940 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
93. CENPO ENSGALG00000016609 1699 0.939 - - 0.939 - - - - - - - centromere protein O [Source:NCBI gene;Acc:422014]
94. APTX ENSGALG00000001954 692 0.938 - - 0.938 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
95. SLC37A3 ENSGALG00000012849 836 0.937 - - 0.937 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
96. MED15 ENSGALG00000006430 814 0.937 - - 0.937 - - - - - - - mediator complex subunit 15 [Source:HGNC Symbol;Acc:HGNC:14248]
97. BBX ENSGALG00000015353 1281 0.936 - - 0.936 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
98. MIB1 ENSGALG00000014974 3583 0.936 - - 0.936 - - - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
99. C18orf8 C18orf8 1512 0.934 - - 0.934 - - - - - - -
100. CHGA ENSGALG00000010820 1028 0.934 - - 0.934 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]

There are 656 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA