Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for AMBRA1

Gene Name Gene ID Reads Annotation
AMBRA1 AMBRA1 382










Genes with expression patterns similar to AMBRA1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. AMBRA1 AMBRA1 382 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. phf20b ENSDARG00000038737, ENSDARG00000111662, ENSDARG00000116554 1385 1.475 - - - - - 0.721 0.754 - - PHD finger protein 20, b [Source:ZFIN;Acc:ZDB-GENE-040822-33]
3. tspan33 tspan33 453 1.451 0.743 - - - - - 0.708 - -
4. slc6a13l 121 0.938 - - - - - - 0.938 - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
5. si:dkeyp-72g6.2 si:dkeyp-72g6.2 121 0.926 - - - - - - 0.926 - -
6. OXR1 OXR1 378 0.918 - - - - - - 0.918 - -
7. cc2d1b ENSDARG00000099445 253 0.914 - - - - - - 0.914 - - coiled-coil and C2 domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-1426]
8. MAST3 MAST3 540 0.908 0.908 - - - - - - - -
9. IL17RD ENSDARG00000098359 2309 0.904 - - - - - - 0.904 - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
10. si:ch73-127m5.2 ENSDARG00000096797 429 0.898 - 0.898 - - - - - - - si:ch73-127m5.2 [Source:ZFIN;Acc:ZDB-GENE-030131-1052]
11. ecd ENSDARG00000022944, ENSDARG00000114710 273 0.891 - - - - - - 0.891 - - ecdysoneless homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6304]
12. CABZ01102038.1 ENSDARG00000116210 132 0.891 - 0.891 - - - - - - - growth arrest-specific 7b [Source:NCBI gene;Acc:100333627]
13. dnajb9b ENSDARG00000016886 270 0.89 - - - - - - 0.890 - - DnaJ (Hsp40) homolog, subfamily B, member 9b [Source:ZFIN;Acc:ZDB-GENE-050522-76]
14. zgc:101664 ENSDARG00000035700 530 0.886 - - - - - - 0.886 - - zgc:101664 [Source:ZFIN;Acc:ZDB-GENE-041010-187]
15. ptplad1 ptplad1 1084 0.879 - - - - - - 0.879 - -
16. wnt6b ENSDARG00000073935 236 0.878 - - - - - - 0.878 - - wingless-type MMTV integration site family, member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-513]
17. fam105ba fam105ba 93 0.871 0.871 - - - - - - - -
18. gatsl2 1618 0.866 - - - - - - 0.866 - - GATS protein-like 2
19. dapk1 ENSDARG00000060093 351 0.866 - - - - - - 0.866 - - death-associated protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-177]
20. SHROOM2 SHROOM2 934 0.865 - - - - - - 0.865 - -
21. dnase1l3 dnase1l3 455 0.864 - - - - - - 0.864 - -
22. nbas ENSDARG00000008593 30 0.864 0.864 - - - - - - - - neuroblastoma amplified sequence [Source:ZFIN;Acc:ZDB-GENE-041014-367]
23. capn8 ENSDARG00000055715, ENSDARG00000111228 497 0.861 - - - - - - 0.861 - - calpain 8 [Source:ZFIN;Acc:ZDB-GENE-050522-279]
24. si:dkey-17e16.8 284 0.86 - - - - - - 0.860 - - si:dkey-17e16.8
25. ttc26 ENSDARG00000012039 505 0.857 0.857 - - - - - - - - tetratricopeptide repeat domain 26 [Source:ZFIN;Acc:ZDB-GENE-041212-41]
26. taf1a ENSDARG00000052471 252 0.857 - - - - - 0.857 - - - TATA box binding protein (TBP)-associated factor, RNA polymerase I, A [Source:ZFIN;Acc:ZDB-GENE-041014-272]
27. pex12 ENSDARG00000035149 175 0.856 - 0.856 - - - - - - - peroxisomal biogenesis factor 12 [Source:ZFIN;Acc:ZDB-GENE-040426-929]
28. setd1ba ENSDARG00000060847, ENSDARG00000111265 146 0.856 - - - - - - 0.856 - - SET domain containing 1B, a [Source:ZFIN;Acc:ZDB-GENE-050309-289]
29. vasna ENSDARG00000099266, ENSDARG00000111629 488 0.856 - - - - - - 0.856 - - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
30. lef1 ENSDARG00000031894 492 0.854 - - - - - 0.854 - - - lymphoid enhancer-binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-990714-26]
31. capn7 ENSDARG00000102987 386 0.852 - - - - - - 0.852 - - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
32. samhd1 ENSDARG00000071288 1279 0.851 - - - - - - 0.851 - - SAM domain and HD domain 1 [Source:ZFIN;Acc:ZDB-GENE-090313-386]
33. B3GNT2_1 B3GNT2_1 380 0.848 - - - - - - 0.848 - -
34. PLD5 PLD5 496 0.847 - - - - - - 0.847 - -
35. znf750 ENSDARG00000102267 327 0.846 - - - - - - 0.846 - - zinc finger protein 750 [Source:ZFIN;Acc:ZDB-GENE-050417-313]
36. abhd2a ENSDARG00000025797 312 0.846 - - - - - - 0.846 - - abhydrolase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-040426-784]
37. retsat ENSDARG00000018600 832 0.844 - - - - - - 0.844 - - retinol saturase (all-trans-retinol 13,14-reductase) [Source:ZFIN;Acc:ZDB-GENE-050320-11]
38. CABZ01074899.1 CABZ01074899.1 89 0.843 0.843 - - - - - - - -
39. si:dkey-222f2.1 ENSDARG00000043242 192 0.843 0.843 - - - - - - - - si:dkey-222f2.1 [Source:ZFIN;Acc:ZDB-GENE-050208-726]
40. DEPDC7 19 0.843 0.843 - - - - - - - - DEP domain containing 7, transcript variant X1
41. zgc:92590 ENSDARG00000040282 13 0.843 0.843 - - - - - - - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
42. CCDC23 CCDC23 54 0.843 0.843 - - - - - - - -
43. CABZ01012080.1 CABZ01012080.1 10 0.843 0.843 - - - - - - - -
44. lrrc48 lrrc48 50 0.843 0.843 - - - - - - - -
45. lats2 ENSDARG00000078864, ENSDARG00000115103 2063 0.842 - - - - - - 0.842 - - large tumor suppressor kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050119-6]
46. si:ch211-113e8.10 ENSDARG00000079631 498 0.839 - - - - - - 0.839 - - si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
47. tpp1 ENSDARG00000042793 1497 0.834 - - - - - - 0.834 - - tripeptidyl peptidase I [Source:ZFIN;Acc:ZDB-GENE-030131-6654]
48. HSCB HSCB 395 0.833 - - - - - - 0.833 - -
49. CCSER2 CCSER2 272 0.829 - - - - - - 0.829 - -
50. alg2 ENSDARG00000070399 772 0.828 - - - - - - 0.828 - - asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060502-2]
51. zgc:64189 ENSDARG00000033501 244 0.827 - - - - - - 0.827 - - zgc:64189 [Source:ZFIN;Acc:ZDB-GENE-040426-1397]
52. psme3 ENSDARG00000012234, ENSDARG00000111284 113 0.824 0.824 - - - - - - - - proteasome activator subunit 3 [Source:ZFIN;Acc:ZDB-GENE-991110-19]
53. zgc:162780 ENSDARG00000069548 340 0.822 - - - - - - 0.822 - - zgc:162780 [Source:ZFIN;Acc:ZDB-GENE-070410-92]
54. slc30a1b ENSDARG00000053896 293 0.822 - - - - - - 0.822 - - solute carrier family 30 (zinc transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070424-43]
55. fam20c fam20c 603 0.822 - - - - - - 0.822 - -
56. CT485993.2 CT485993.2 1419 0.82 - - - - - - 0.820 - -
57. nutf2l ENSDARG00000014499 3927 0.819 - - - - - 0.819 - - - nuclear transport factor 2, like [Source:ZFIN;Acc:ZDB-GENE-020416-1]
58. dhrs13a.1 ENSDARG00000026322 336 0.819 - - - - - - 0.819 - - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041114-58]
59. SCYL1_1 SCYL1_1 209 0.818 - - - - - - 0.818 - -
60. nudt5 ENSDARG00000078073 779 0.817 - - - - - - 0.817 - - nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:ZFIN;Acc:ZDB-GENE-040625-63]
61. hoxd13a ENSDARG00000059256 1190 0.817 - - - - - 0.817 - - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
62. si:ch211-147d7.5 ENSDARG00000095457 132 0.816 - 0.816 - - - - - - - si:ch211-147d7.5 [Source:ZFIN;Acc:ZDB-GENE-041014-353]
63. TXNDC16 ENSDARG00000032256 231 0.811 - - - - - - 0.811 - - thioredoxin domain containing 16 [Source:ZFIN;Acc:ZDB-GENE-100712-1]
64. ssx2ip ssx2ip 482 0.811 - - - - - - 0.811 - -
65. iah1 ENSDARG00000015765 326 0.811 - - - - - - 0.811 - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
66. mtmr7b ENSDARG00000070412, ENSDARG00000112046 724 0.811 - - - - - - 0.811 - - myotubularin related protein 7b [Source:ZFIN;Acc:ZDB-GENE-050913-66]
67. C18H16orf70 C18H16orf70 542 0.811 - - - - - - 0.811 - -
68. MAP6D1 ENSDARG00000079777 47 0.81 0.810 - - - - - - - - MAP6 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-293]
69. GIGYF1 1830 0.809 - - - - - - 0.809 - - GRB10 interacting GYF protein 1, transcript variant X6
70. si:dkeyp-117b11.2 ENSDARG00000076419 143 0.809 0.809 - - - - - - - - si:dkeyp-117b11.2 [Source:ZFIN;Acc:ZDB-GENE-081104-454]
71. bhik bhik 23 0.807 0.807 - - - - - - - -
72. PHLDB2 PHLDB2 1164 0.806 - - - - - - 0.806 - -
73. dhx40 ENSDARG00000041586 131 0.806 - - - - - 0.806 - - - DEAH (Asp-Glu-Ala-His) box polypeptide 40 [Source:ZFIN;Acc:ZDB-GENE-080507-1]
74. baxa ENSDARG00000020623, ENSDARG00000089129 2611 0.805 - - - - - - 0.805 - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
75. si:ch211-232i5.1 ENSDARG00000078072 1337 0.805 - - - - - - 0.805 - - si:ch211-232i5.1 [Source:ZFIN;Acc:ZDB-GENE-070705-127]
76. xrcc4 ENSDARG00000010732 553 0.803 - - - - - - 0.803 - - X-ray repair complementing defective repair in Chinese hamster cells 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1755]
77. panx1b ENSDARG00000014910, ENSDARG00000112399 136 0.803 - - - 0.803 - - - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
78. si:ch211-236p5.3 ENSDARG00000086418 138 0.803 0.803 - - - - - - - - si:ch211-236p5.3 [Source:ZFIN;Acc:ZDB-GENE-081028-31]
79. zgc:173702 ENSDARG00000110229 411 0.803 0.803 - - - - - - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
80. akt2l ENSDARG00000103612 537 0.802 - - - - - - 0.802 - - v-akt murine thymoma viral oncogene homolog 2, like [Source:ZFIN;Acc:ZDB-GENE-040121-5]
81. kita ENSDARG00000043317 1091 0.802 - - - - - - 0.802 - - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-980526-464]
82. brf1b ENSDARG00000005002, ENSDARG00000115325 276 0.802 - - - - - - 0.802 - - BRF1, RNA polymerase III transcription initiation factor b [Source:ZFIN;Acc:ZDB-GENE-030131-6248]
83. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 0.801 - - - - - - 0.801 - - CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
84. rfxap ENSDARG00000076891 1299 0.801 - - - - - 0.801 - - - regulatory factor X-associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-321]
85. zfpm1 ENSDARG00000041572, ENSDARG00000109585 331 0.8 - - - - - - 0.800 - - zinc finger protein, FOG family member 1 [Source:ZFIN;Acc:ZDB-GENE-050419-238]
86. rab3c ENSDARG00000014462, ENSDARG00000042803 508 0.8 - - - - - - 0.800 - - RAB3C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-263]
87. prrx1b ENSDARG00000042027 1128 0.799 - - - - - - 0.799 - - paired related homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9033]
88. setd8b 2528 0.798 - - - - - - 0.798 - - SET domain containing (lysine methyltransferase) 8b
89. magi2 magi2 301 0.797 - - - - - - 0.797 - -
90. BCR ENSDARG00000079286 389 0.797 - 0.797 - - - - - - - breakpoint cluster region [Source:ZFIN;Acc:ZDB-GENE-040724-43]
91. CU855890.3 CU855890.3 307 0.796 - - - - - - 0.796 - -
92. BX548000.3 BX548000.3 241 0.796 - 0.796 - - - - - - -
93. slc25a36b ENSDARG00000015915 1750 0.795 - - - - - - 0.795 - - solute carrier family 25 (pyrimidine nucleotide carrier ), member 36b [Source:ZFIN;Acc:ZDB-GENE-080219-28]
94. ERICH2 ENSDARG00000107534 160 0.795 - - - - - 0.795 - - - glutamate-rich 2 [Source:ZFIN;Acc:ZDB-GENE-131231-2]
95. zfand2a ENSDARG00000103511 829 0.795 - - - - - - 0.795 - - zinc finger, AN1-type domain 2A [Source:ZFIN;Acc:ZDB-GENE-040426-1596]
96. DNAH11 ENSDARG00000077384, ENSDARG00000094282 372 0.795 - - - - - - 0.795 - - dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
97. cmtm6 ENSDARG00000099631 641 0.794 - - - - - - 0.794 - - CKLF-like MARVEL transmembrane domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030729-15]
98. EMILIN3 1347 0.794 - - - - - - 0.794 - - elastin microfibril interfacer 3
99. impad1 ENSDARG00000058114 667 0.793 - - - - - - 0.793 - - inositol monophosphatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-051127-23]
100. CR385063.1 CR385063.1 590 0.793 - 0.793 - - - - - - -

There are 331 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA