Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ALMS1

Gene Name Gene ID Reads Annotation
ALMS1 ENSDARG00000074779 900 Alstrom syndrome protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4837]










Genes with expression patterns similar to ALMS1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ALMS1 ENSDARG00000074779 900 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Alstrom syndrome protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4837]
2. spred2b ENSDARG00000008372 405 1.672 - 0.837 - - - - 0.835 - - sprouty-related, EVH1 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2342]
3. atp13a atp13a 2867 1.608 - - - - - 0.861 - 0.747 -
4. GATAD2B ENSDARG00000005834 3855 1.597 - - - - - - 0.768 - 0.829 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
5. COX18 ENSDARG00000102463 602 1.594 - 0.765 - - - - 0.829 - - cytochrome c oxidase assembly factor COX18 [Source:ZFIN;Acc:ZDB-GENE-080204-88]
6. tmem35 ENSDARG00000052567 5685 1.584 - - - - - - 0.816 - 0.768 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
7. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.578 - - - - - - 0.789 - 0.789 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
8. rtca ENSDARG00000002215 3558 1.578 - - - - - - 0.838 - 0.740 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
9. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.571 - - - - - - 0.806 - 0.765 ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
10. fzd3a ENSDARG00000021664 1958 1.571 - - - - - - 0.779 - 0.792 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
11. hnrnpub ENSDARG00000004735 16496 1.57 - - - - - - 0.804 - 0.766 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
12. NBR1 NBR1 752 1.564 - - - 0.759 - 0.805 - - -
13. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.562 - - - - - - 0.769 - 0.793 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
14. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.561 - - - - - - 0.742 - 0.819 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
15. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 1.56 - 0.855 - 0.705 - - - - - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
16. nrarpb ENSDARG00000018958 6225 1.557 - - - - - - 0.776 - 0.781 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
17. tmsb ENSDARG00000054911 6411 1.553 - - - - - - 0.852 - 0.701 thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
18. rassf2a ENSDARG00000029865, ENSDARG00000113625 1134 1.549 - 0.719 - - - - 0.830 - - Ras association (RalGDS/AF-6) domain family member 2a [Source:ZFIN;Acc:ZDB-GENE-040912-124]
19. klf7a ENSDARG00000073857 1226 1.547 - - - - - - 0.776 0.771 - Kruppel-like factor 7a [Source:ZFIN;Acc:ZDB-GENE-050522-276]
20. hif1an ENSDARG00000031915 2098 1.542 - - - - - - 0.787 - 0.755 hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
21. cdkn2d ENSDARG00000094176 190 1.535 - 0.799 - - - - 0.736 - - cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-110316-1]
22. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.533 - - - - - - 0.757 - 0.776 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
23. rbmx ENSDARG00000014244 3445 1.53 - - - 0.769 - - - - 0.761 RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
24. coe2 coe2 1633 1.523 - - - - - - 0.713 - 0.810
25. CHL1 CHL1 1553 1.515 - - - 0.771 - - 0.744 - -
26. igdcc3 ENSDARG00000075158 1921 1.509 - - - - - - 0.787 - 0.722 immunoglobulin superfamily, DCC subclass, member 3 [Source:ZFIN;Acc:ZDB-GENE-080303-24]
27. zbtb17 ENSDARG00000074548 661 1.503 - 0.745 - - - - 0.758 - - zinc finger and BTB domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-090313-240]
28. ptbp2b ENSDARG00000015901 2458 1.491 - - - - - - 0.774 - 0.717 polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
29. kifap3a ENSDARG00000008639 721 1.491 - 0.785 - - - - - - 0.706 kinesin-associated protein 3a [Source:ZFIN;Acc:ZDB-GENE-040912-74]
30. dpysl4 ENSDARG00000103490 534 1.491 - - - - - - 0.760 - 0.731 dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
31. dla ENSDARG00000010791 9281 1.485 - - - - - - 0.729 - 0.756 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
32. hmp19 2554 1.481 - - - - - - 0.766 - 0.715 HMP19 protein
33. golga7ba ENSDARG00000036295 1460 1.478 - - - - - - 0.767 - 0.711 golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]
34. ddx39ab ENSDARG00000015111 11619 1.477 - - - - - - 0.768 - 0.709 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
35. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.475 - - - - - - 0.758 - 0.717 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
36. tuba1c ENSDARG00000055216 8384 1.475 - - - - - - 0.737 - 0.738 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
37. marcksa ENSDARG00000004049 2518 1.474 - - - - - - 0.720 - 0.754 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
38. LDLRAD4 LDLRAD4 1237 1.473 - - - - - - 0.727 - 0.746
39. hdac9b ENSDARG00000056642 1148 1.473 - 0.727 - - - - 0.746 - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
40. tox ENSDARG00000032317 9126 1.472 - - - - - - 0.768 - 0.704 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
41. ZNF710 ZNF710 766 1.472 - - - - - - 0.748 - 0.724
42. CR936437.1 CR936437.1 6465 1.472 - - - - - - 0.731 - 0.741
43. akirin1 ENSDARG00000039969, ENSDARG00000116670 2533 1.47 - - - - - - 0.743 - 0.727 akirin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2178]
44. ctr9 ENSDARG00000009170 1265 1.469 - - - - - - 0.761 - 0.708 CTR9 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-3782]
45. rad21a_1 ENSDARG00000006092 4482 1.467 - - - - - 0.702 0.765 - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
46. foxk2 ENSDARG00000030583 2982 1.462 - - - - - - 0.736 - 0.726 forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
47. RLTPR 1158 1.462 - - - - - - 0.725 - 0.737 RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing, transcript variant X1
48. rbm25 rbm25 3629 1.458 - - - - - - 0.726 - 0.732
49. nadl1.1 1200 1.455 - - - - - - 0.728 - 0.727 neural adhesion molecule L1.1, transcript variant X1
50. slc7a6os ENSDARG00000010596 1599 1.451 - 0.702 - 0.749 - - - - - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
51. tgif1 ENSDARG00000059337 4020 1.451 - - - - - - 0.723 - 0.728 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
52. AGO1 ENSDARG00000092644 4521 1.451 - - - - - - 0.749 - 0.702 argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
53. ADAMTS12 ENSDARG00000067549 477 1.447 - 0.733 - - - 0.714 - - - ADAM metallopeptidase with thrombospondin type 1 motif, 12 [Source:ZFIN;Acc:ZDB-GENE-070705-471]
54. hmgb3a ENSDARG00000056725 15668 1.447 - - - - - - 0.724 - 0.723 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
55. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.447 - - - 0.713 - - 0.734 - - discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
56. rap2ip rap2ip 681 1.441 - - - - - - 0.719 - 0.722
57. pou4f1 ENSDARG00000005559 821 1.44 - - - 0.707 - - 0.733 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
58. cdk2 ENSDARG00000026577 2835 1.44 - - - - - - 0.719 - 0.721 cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
59. CYTH2 ENSDARG00000028800 2349 1.437 - - - - - - 0.723 - 0.714 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
60. rexo1 ENSDARG00000026986 770 1.429 - 0.704 - - - - - - 0.725 REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
61. TIMM21 ENSDARG00000071594 722 1.427 - 0.715 - - - - 0.712 - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
62. sms ENSDARG00000008155 1192 1.42 - 0.704 - - - - 0.716 - - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
63. HNRNPAB HNRNPAB 22267 1.419 - - - - - - 0.712 - 0.707
64. apmap ENSDARG00000017422 2692 1.417 - - - 0.712 - 0.705 - - - adipocyte plasma membrane associated protein [Source:ZFIN;Acc:ZDB-GENE-020919-1]
65. whsc1l1 8544 1.415 - - - - - - 0.700 - 0.715 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
66. si:ch211-11c15.3 si:ch211-11c15.3 1279 1.413 - - - - - - 0.706 - 0.707
67. zdhhc16a ENSDARG00000007808 1080 1.409 - 0.702 - - - - - - 0.707 zinc finger, DHHC-type containing 16a [Source:ZFIN;Acc:ZDB-GENE-040426-1621]
68. ulk1b ENSDARG00000074481 1212 0.924 - - - - - - 0.924 - - unc-51 like autophagy activating kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071203-2]
69. sertad2a ENSDARG00000093412 503 0.908 - - - - - - 0.908 - - SERTA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050309-236]
70. siah1 ENSDARG00000030871 1590 0.894 - - - - - - 0.894 - - siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
71. ipo9 ENSDARG00000016753, ENSDARG00000113327 936 0.889 - - - - - - 0.889 - - importin 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2953]
72. BAI1 BAI1 173 0.881 - - - - - - 0.881 - -
73. si:ch211-197h24.6 ENSDARG00000091631 1933 0.88 - - - - - - 0.880 - - si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
74. fam57ba ENSDARG00000026875 504 0.878 - - - 0.878 - - - - - family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
75. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 0.874 - - - - - - 0.874 - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
76. mpp5a ENSDARG00000006272 1181 0.872 - - - 0.872 - - - - - membrane protein, palmitoylated 5a (MAGUK p55 subfamily member 5) [Source:ZFIN;Acc:ZDB-GENE-020712-1]
77. gbp ENSDARG00000040059 1939 0.871 - - - - - - 0.871 - - glycogen synthase kinase binding protein [Source:ZFIN;Acc:ZDB-GENE-990714-7]
78. rchy1 ENSDARG00000016710, ENSDARG00000109668, ENSDARG00000115626 477 0.87 - - - 0.870 - - - - - ring finger and CHY zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-73]
79. pgls ENSDARG00000021233 264 0.865 - - - 0.865 - - - - - 6-phosphogluconolactonase [Source:ZFIN;Acc:ZDB-GENE-040822-9]
80. pcnxl4 377 0.864 - - - - - - 0.864 - - pecanex-like 4 (Drosophila), transcript variant X2
81. mbip ENSDARG00000019364 238 0.86 - - - 0.860 - - - - - MAP3K12 binding inhibitory protein 1 [Source:ZFIN;Acc:ZDB-GENE-060810-43]
82. C13H6orf203 C13H6orf203 881 0.859 - - - 0.859 - - - - -
83. tpte ENSDARG00000056985 724 0.859 - 0.859 - - - - - - - transmembrane phosphatase with tensin homology [Source:ZFIN;Acc:ZDB-GENE-030131-5503]
84. brdt ENSDARG00000102802 1067 0.859 - - - 0.859 - - - - - bromodomain, testis-specific [Source:ZFIN;Acc:ZDB-GENE-030131-5928]
85. cacng6b ENSDARG00000046079 258 0.858 - 0.858 - - - - - - - calcium channel, voltage-dependent, gamma subunit 6b [Source:ZFIN;Acc:ZDB-GENE-100922-272]
86. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 0.856 - - - - - - 0.856 - - zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
87. pcdh18b ENSDARG00000052494, ENSDARG00000116134 1099 0.852 - - - - - - 0.852 - - protocadherin 18b [Source:ZFIN;Acc:ZDB-GENE-080804-1]
88. tmem11 ENSDARG00000070866 1319 0.852 - - - - - 0.852 - - - transmembrane protein 11 [Source:ZFIN;Acc:ZDB-GENE-050417-37]
89. PEG3_6 PEG3_6 700 0.851 - - - 0.851 - - - - -
90. ubr3 ENSDARG00000042508 738 0.851 - 0.851 - - - - - - - ubiquitin protein ligase E3 component n-recognin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1473]
91. ccr10 ENSDARG00000040643 255 0.85 - 0.850 - - - - - - - chemokine (C-C motif) receptor 10 [Source:ZFIN;Acc:ZDB-GENE-040718-424]
92. hsf2 ENSDARG00000053097 1188 0.849 - - - - - - 0.849 - - heat shock transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-011128-1]
93. ppil2 ENSDARG00000002016, ENSDARG00000116167 914 0.848 - - - 0.848 - - - - - peptidylprolyl isomerase (cyclophilin)-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1096]
94. si:ch211-209j10.6 ENSDARG00000093317 126 0.846 - - - - - - 0.846 - - si:ch211-209j10.6 [Source:ZFIN;Acc:ZDB-GENE-090311-44]
95. FP102311.1 FP102311.1 118 0.845 - - - - - 0.845 - - -
96. KCNA3 KCNA3 748 0.842 - - - - - - 0.842 - -
97. chid1 ENSDARG00000069673 675 0.842 - 0.842 - - - - - - - chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
98. CBFA2T3 ENSDARG00000079012 6799 0.841 - - - - - - 0.841 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
99. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 0.84 - - - - - - 0.840 - - netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
100. mecp2 ENSDARG00000014218 269 0.84 - - - 0.840 - - - - - methyl CpG binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7190]

There are 1221 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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