Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ALMS1

Gene Name Gene ID Reads Annotation
ALMS1 ENSGALG00000044620 570 ALMS1, centrosome and basal body associated protein, transcript variant X1











Genes with expression patterns similar to ALMS1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ALMS1 ENSGALG00000044620 570 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ALMS1, centrosome and basal body associated protein, transcript variant X1
2. RBBP8 ENSGALG00000014982 3255 2.419 - - - 0.738 - - - - 0.942 0.739 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
3. FANCB ENSGALG00000016569 1193 1.868 - - - - - - - - 0.928 0.940 FA complementation group B [Source:NCBI gene;Acc:418628]
4. PCLO 249 1.851 - - - - - - - - 0.983 0.868 piccolo presynaptic cytomatrix protein
5. FASTKD3 ENSGALG00000033521 1186 1.84 - - - - - - - - 0.958 0.882 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
6. MTSS1 ENSGALG00000041969 1312 1.778 - - - - - - - - 0.921 0.857 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
7. VWF ENSGALG00000017272 1012 1.774 - - - - - - - - 0.943 0.831 Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
8. ENSGALG00000014171 ENSGALG00000014171 10383 1.76 - - - - - - - - 0.905 0.855
9. FSTL4 ENSGALG00000031487 529 1.751 - - - - - - - - 0.880 0.871 follistatin like 4 [Source:NCBI gene;Acc:395163]
10. CRYM ENSGALG00000002484 3558 1.724 - - - - - - - - 0.869 0.855 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
11. AFG3L2 ENSGALG00000013853 1138 1.691 - - - - - - - - 0.783 0.908 AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
12. TPM4 ENSGALG00000002563 15621 1.682 - - - - - - - - 0.874 0.808 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
13. LRRN4 ENSGALG00000008815 481 1.679 - - - - - - - - 0.808 0.871 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
14. GTF3C1 ENSGALG00000007387 5788 1.671 - - - - - - - - 0.858 0.813 general transcription factor IIIC subunit 1 [Source:HGNC Symbol;Acc:HGNC:4664]
15. SMDT1 ENSGALG00000011897 9360 1.669 - - - - - - - - 0.859 0.810 single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
16. IQGAP1 ENSGALG00000030162 1047 1.663 - - - - - - - - 0.786 0.877 IQ motif containing GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:6110]
17. SNORA73 SNORA73 1644 1.633 - - - - - - - - 0.705 0.928
18. ENSGALG00000003515 ENSGALG00000003515 1003 1.629 - - - - - - - - 0.750 0.879
19. CHAMP1 ENSGALG00000016813 508 1.625 - - - 0.750 - - - - 0.875 - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
20. SLC39A13 ENSGALG00000008122 2003 1.617 - - - - - - - - 0.777 0.840 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
21. ATP6V0A1 ENSGALG00000003256 4408 1.602 - - - - - - - - 0.857 0.745 ATPase H+ transporting V0 subunit a1 [Source:NCBI gene;Acc:395474]
22. WDSUB1 ENSGALG00000012574 2038 1.602 - - - - - - - - 0.739 0.863 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
23. RIN2 ENSGALG00000008457 2661 1.601 - - - - - - - - 0.809 0.792 Ras and Rab interactor 2 [Source:HGNC Symbol;Acc:HGNC:18750]
24. PROM1 ENSGALG00000014496 2494 1.596 - - - - - - - - 0.718 0.878 prominin 1 [Source:NCBI gene;Acc:422825]
25. RBM5 30998 1.587 - - - - - - - - 0.732 0.855 RNA binding motif protein 5, transcript variant X1
26. NCOR1 ENSGALG00000004477 4534 1.582 - - - - - - - - 0.785 0.797 nuclear receptor corepressor 1 [Source:HGNC Symbol;Acc:HGNC:7672]
27. SNRNP48 ENSGALG00000013005 1468 1.581 - - - - - - - - 0.789 0.792 small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
28. CCDC66 ENSGALG00000005450 1262 1.57 - - - - - - - - 0.844 0.726 coiled-coil domain containing 66 [Source:HGNC Symbol;Acc:HGNC:27709]
29. CASKIN1 604 1.569 - - - - - - - - 0.706 0.863 CASK interacting protein 1, transcript variant X4
30. BDP1 BDP1 3073 1.565 - - - - - - - 0.765 - 0.800
31. SNAI1 ENSGALG00000008018 3930 1.548 - - - - - - - - 0.814 0.734 snail family transcriptional repressor 1 [Source:NCBI gene;Acc:396047]
32. HSPA12A ENSGALG00000009248 7783 1.539 - - - - - - - - 0.733 0.806 heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
33. HSD17B12 ENSGALG00000036787 11748 1.509 - - - - - - - - 0.706 0.803 hydroxysteroid 17-beta dehydrogenase 12 [Source:HGNC Symbol;Acc:HGNC:18646]
34. COX17 ENSGALG00000014981 5646 1.497 - - - - - - - - 0.712 0.785 COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
35. NCBP1 ENSGALG00000002087 8907 1.485 - - - - - - - - 0.775 0.710 nuclear cap binding protein subunit 1 [Source:NCBI gene;Acc:427379]
36. FUBP1 ENSGALG00000008939 2850 1.479 - - - - - - - - 0.724 0.755 far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
37. KIDINS220 ENSGALG00000016409 854 1.475 - - - 0.719 - - - - - 0.756 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
38. BRD2 ENSGALG00000000156 1670 1.455 - - - 0.706 - - - - 0.749 - bromodomain containing 2 [Source:NCBI gene;Acc:417049]
39. FAM120B ENSGALG00000011180 101 0.988 - - - - - - - - 0.988 - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
40. FDFT1 ENSGALG00000016665 3053 0.977 - - - - - - - - 0.977 - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
41. ODZ2 ODZ2 1380 0.975 - - - - - - - - 0.975 -
42. KLHL15 ENSGALG00000016345 1638 0.972 - - - - - - - - 0.972 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
43. KIAA1217 ENSGALG00000007766 144 0.972 - - - - - - - - 0.972 - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
44. LHCGR ENSGALG00000009095 174 0.969 - - - - - - - - 0.969 - luteinizing hormone/choriogonadotropin receptor [Source:NCBI gene;Acc:395776]
45. PRDM15 ENSGALG00000019178 2729 0.967 - - - - - - - - 0.967 - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
46. ENSGALG00000026919 ENSGALG00000026919 301 0.966 - - - - - - - - 0.966 -
47. CARS2 ENSGALG00000016847 3814 0.965 - - - - - - - - 0.965 - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
48. CUX2 ENSGALG00000004598 231 0.962 - - - - - - - - 0.962 - cut like homeobox 2 [Source:HGNC Symbol;Acc:HGNC:19347]
49. ABCC8 ENSGALG00000006172 41 0.961 - - - - - - - - 0.961 - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
50. MDN1 ENSGALG00000015733 2352 0.957 - - - - - - - - 0.957 - midasin AAA ATPase 1, transcript variant X1
51. DTX3L ENSGALG00000012075 399 0.957 - - - - - - - - 0.957 - deltex E3 ubiquitin ligase 3L [Source:HGNC Symbol;Acc:HGNC:30323]
52. NRXN1 ENSGALG00000009107 277 0.954 - - - - - - - - 0.954 - neurexin 1 [Source:NCBI gene;Acc:395398]
53. SPATA5L1 ENSGALG00000005682 240 0.954 - - - - - - - - 0.954 - spermatogenesis associated 5 like 1 [Source:HGNC Symbol;Acc:HGNC:28762]
54. XPOT ENSGALG00000009835 2953 0.953 - - - - - - - - 0.953 - exportin for tRNA [Source:NCBI gene;Acc:417824]
55. CP ENSGALG00000030773 119 0.952 - - - - - - - - - 0.952 ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
56. FLRT3 ENSGALG00000008716 593 0.952 - - - - - - - - 0.952 - fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
57. SMAP2 ENSGALG00000029244 498 0.95 - - - - - - - - 0.950 - small ArfGAP2 [Source:NCBI gene;Acc:419641]
58. QKI ENSGALG00000011555 1275 0.95 - - - - - - - - - 0.950 QKI, KH domain containing RNA binding [Source:NCBI gene;Acc:374204]
59. C7 ENSGALG00000014835 322 0.948 - - - - - - - - 0.948 - Gallus gallus complement C7 (C7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318402]
60. PRDM4 ENSGALG00000012619 876 0.947 - - - - - - - - - 0.947 PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
61. MAN1A2 451 0.946 - - - - - - - - - 0.946 mannosidase alpha class 1A member 2
62. PDXDC1 ENSGALG00000034829 406 0.944 - - - - - - - - 0.944 - pyridoxal dependent decarboxylase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28995]
63. RFFL ENSGALG00000002225 928 0.943 - - - - - - - - 0.943 - ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
64. GALM ENSGALG00000013828 1546 0.943 - - - - - - - - 0.943 - galactose mutarotase [Source:HGNC Symbol;Acc:HGNC:24063]
65. TMEM269 ENSGALG00000025800 143 0.943 - - - - - - - - 0.943 - transmembrane protein 269 [Source:HGNC Symbol;Acc:HGNC:52381]
66. SLC45A3 ENSGALG00000000703 85 0.943 - - - - - - - - 0.943 - solute carrier family 45 member 3 [Source:HGNC Symbol;Acc:HGNC:8642]
67. FGD5 ENSGALG00000008546 4031 0.941 - - - - - - - - 0.941 - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
68. LRRC59 ENSGALG00000007673 2081 0.941 - - - - - - - - 0.941 - leucine rich repeat containing 59 [Source:NCBI gene;Acc:422103]
69. MARVELD2 ENSGALG00000027140 828 0.941 - - - - - - - - 0.941 - MARVEL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26401]
70. NTL ENSGALG00000005156 278 0.941 - - - - - - - - 0.941 - neurotrypsin-like, transcript variant X7
71. CHRNA7 ENSGALG00000004096 107 0.94 - - - - - - - - 0.940 - cholinergic receptor nicotinic alpha 7 subunit [Source:NCBI gene;Acc:374001]
72. SH3D19 ENSGALG00000010081 52 0.94 - - - - - - - - 0.940 - SH3 domain containing 19 [Source:HGNC Symbol;Acc:HGNC:30418]
73. RUFY2 1442 0.939 - - - - - - - - 0.939 - RUN and FYVE domain containing 2, transcript variant X1
74. ELL2 ENSGALG00000014678 1111 0.938 - - - - - - - - 0.938 - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
75. CEP112 ENSGALG00000034989 123 0.938 - - - - - - - - 0.938 - centrosomal protein 112 [Source:NCBI gene;Acc:101749632]
76. CAMKK1 ENSGALG00000001617 64 0.938 - - - - - - - - 0.938 - calcium/calmodulin dependent protein kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:1469]
77. TMEM74 ENSGALG00000041553 398 0.937 - - - - - - - - 0.937 - transmembrane protein 74 [Source:HGNC Symbol;Acc:HGNC:26409]
78. MIB1 ENSGALG00000014974 3583 0.937 - - - - - - - - 0.937 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
79. RAD17 ENSGALG00000015571 1374 0.935 - - - - - - - - 0.935 - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
80. DCP1B 1306 0.935 - - - - - - - - 0.935 - decapping mRNA 1B
81. BACH1 ENSGALG00000015828 114 0.934 - - - - - - - - 0.934 - BTB domain and CNC homolog 1 [Source:HGNC Symbol;Acc:HGNC:935]
82. TOM1L2 ENSGALG00000004902 89 0.933 - - - - - - - - 0.933 - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
83. MAP3K5 ENSGALG00000013892 565 0.932 - - - - - - - - 0.932 - mitogen-activated protein kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6857]
84. ERBB2 ENSGALG00000031529 313 0.929 - - - - - - - - 0.929 - erb-b2 receptor tyrosine kinase 2 [Source:NCBI gene;Acc:426130]
85. SNCAIP ENSGALG00000005330 2425 0.928 - - - - - - - - 0.928 - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
86. MTERFD1 MTERFD1 3640 0.928 - - - - - - - - - 0.928
87. PARP3 ENSGALG00000004517 331 0.927 - - - - - - - - 0.927 - poly(ADP-ribose) polymerase family member 3 [Source:HGNC Symbol;Acc:HGNC:273]
88. GPX8 ENSGALG00000026704 4497 0.927 - - - - - - - - - 0.927 glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
89. AACS ENSGALG00000002899 960 0.927 - - - - - - - - 0.927 - acetoacetyl-CoA synthetase [Source:NCBI gene;Acc:416811]
90. RHPN2 ENSGALG00000004814 1865 0.926 - - - - - - - - 0.926 - rhophilin Rho GTPase binding protein 2 [Source:HGNC Symbol;Acc:HGNC:19974]
91. MSANTD4 ENSGALG00000017177 3306 0.925 - - - - - - - - 0.925 - Myb/SANT DNA binding domain containing 4 with coiled-coils [Source:HGNC Symbol;Acc:HGNC:29383]
92. STRADA ENSGALG00000000550 6912 0.924 - - - - - - - - - 0.924 STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
93. CPSF2 ENSGALG00000010783 5236 0.923 - - - - - - - - - 0.923 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
94. ECM2 ENSGALG00000004695 375 0.922 - - - - - - - - 0.922 - extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:3154]
95. KLHL10 ENSGALG00000003624 205 0.921 - - - - - - - - 0.921 - kelch like family member 10 [Source:NCBI gene;Acc:420033]
96. YBX3 ENSGALG00000031890 819 0.921 - - - - - - - - 0.921 - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
97. SBNO2 ENSGALG00000037522 1546 0.921 - - - - - - - - 0.921 - strawberry notch homolog 2 [Source:HGNC Symbol;Acc:HGNC:29158]
98. FLOT2 ENSGALG00000031216 1003 0.92 - - - - - - - - 0.920 - flotillin 2 [Source:NCBI gene;Acc:417579]
99. CEP250 ENSGALG00000026151 163 0.92 - - - - - - - - 0.920 - centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
100. ANKRD50 ENSGALG00000011831 2870 0.92 - - - - - - - - 0.920 - ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]

There are 751 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA