Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ALKBH3

Gene Name Gene ID Reads Annotation
ALKBH3 ENSGALG00000041309 7 alkB homolog 3, alpha-ketoglutaratedependent dioxygenase [Source:NCBI gene;Acc:423169]











Genes with expression patterns similar to ALKBH3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ALKBH3 ENSGALG00000041309 7 4 - - 1.000 - 1.000 1.000 - 1.000 - - alkB homolog 3, alpha-ketoglutaratedependent dioxygenase [Source:NCBI gene;Acc:423169]
2. MUC13 7 1 - - - - - - - 1.000 - - mucin 13, cell surface associated, transcript variant X10
3. GTPBP6 ENSGALG00000016717 17 1 - - - - - - - 1.000 - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
4. TREM-B1 ENSGALG00000003361 8 1 - - - - - - - 1.000 - - triggering receptor expressed on myeloid cells B1 [Source:NCBI gene;Acc:768535]
5. ACACB 6 1 - - - - - - - 1.000 - - acetyl-CoA carboxylase beta
6. SPATA4 ENSGALG00000010822 4 1 - - - - - - - 1.000 - - spermatogenesis associated 4 [Source:NCBI gene;Acc:422571]
7. ENSGALG00000023027 ENSGALG00000023027 5 1 - - - - - - - 1.000 - -
8. GABRA5 ENSGALG00000016744 12 1 - - - - - - - 1.000 - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
9. FAM214B ENSGALG00000002069, ENSGALG00000038279 213 1 - - - - - - - 1.000 - - family with sequence similarity 214 member B, transcript variant X14
10. snoZ39 snoZ39 2 1 - - - - - - - 1.000 - -
11. DBN1 ENSGALG00000033405 216 1 - - - - - - - 1.000 - - drebrin 1 [Source:NCBI gene;Acc:396496]
12. HBP1 ENSGALG00000008050 19 1 - - - - - - - 1.000 - - HMG-box transcription factor 1 [Source:NCBI gene;Acc:417705]
13. ENSGALG00000028652 ENSGALG00000028652 65 1 - - - - - - - 1.000 - -
14. SOX10 ENSGALG00000012290 3942 1 - - - - - - - 1.000 - - SRY-box 10 [Source:NCBI gene;Acc:395573]
15. GSAP ENSGALG00000008312 12 1 - - - - - - - 1.000 - - gamma-secretase activating protein [Source:HGNC Symbol;Acc:HGNC:28042]
16. GP5 ENSGALG00000045125 3 1 - - - - - - - 1.000 - - glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]
17. CDHR1 ENSGALG00000002314 24 1 - - - - - - - 1.000 - - cadherin related family member 1 [Source:NCBI gene;Acc:414847]
18. ENSGALG00000023353 ENSGALG00000023353 1 1 - - - - - - - 1.000 - -
19. CD101 12 1 - - - - - - - 1.000 - - CD101 molecule, transcript variant X4
20. SLC30A8 ENSGALG00000034377 3 1 - - - - - - - 1.000 - - solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
21. GPR17 ENSGALG00000037153 3 1 - - - - - - - 1.000 - - G protein-coupled receptor 17 [Source:HGNC Symbol;Acc:HGNC:4471]
22. C1orf228 3 1 - - - - - - - 1.000 - - chromosome 1 open reading frame 228, transcript variant X5
23. SFT2D2 ENSGALG00000019228 10 1 - - - - - - - 1.000 - - SFT2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25140]
24. SUSD1 ENSGALG00000015677 12 1 - - - - - - - 1.000 - - sushi domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25413]
25. SWAP70 ENSGALG00000005750 32 0.997 - - - - - - - 0.997 - - switching B cell complex subunit SWAP70 [Source:NCBI gene;Acc:423044]
26. GABRA2 ENSGALG00000014206 19 0.994 - - - - - - - 0.994 - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
27. PTBP3 ENSGALG00000015669 16 0.984 - - - - - - - 0.984 - - polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]
28. TOM1L2 ENSGALG00000004902 89 0.978 - - - - - - - 0.978 - - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
29. SRRL ENSGALG00000002638 26 0.97 - - - - - - - 0.970 - - serine racemase-like, transcript variant X8
30. NMRAL1 ENSGALG00000029820 29 0.97 - - - - - - - 0.970 - - NmrA like redox sensor 1 [Source:NCBI gene;Acc:416672]
31. INSC ENSGALG00000032558 74 0.968 - - - - - - - 0.968 - - INSC, spindle orientation adaptor protein [Source:HGNC Symbol;Acc:HGNC:33116]
32. PRKRIR PRKRIR 46 0.968 - - - - - - - 0.968 - -
33. ENSGALG00000020972 ENSGALG00000020972 54 0.955 - - - - - - - 0.955 - -
34. MAP3K13 ENSGALG00000006655 632 0.954 - - - - - - - 0.954 - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
35. URB2 ENSGALG00000011101 12 0.953 - - - - - - - 0.953 - - URB2 ribosome biogenesis 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:28967]
36. ZP1 ENSGALG00000031916 122 0.953 - - - - - - - 0.953 - - zona pellucida glycoprotein 1 [Source:NCBI gene;Acc:395418]
37. HECTD2 ENSGALG00000038043 177 0.953 - - - - - - - 0.953 - - HECT domain E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:26736]
38. CHGB ENSGALG00000046616 357 0.948 - - - - - - - 0.948 - - chromogranin B [Source:HGNC Symbol;Acc:HGNC:1930]
39. RAB43 ENSGALG00000005021 5 0.946 - - - - - - - 0.946 - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
40. PWWP2B ENSGALG00000010491 30 0.945 - - - - - - - 0.945 - - PWWP domain containing 2B [Source:HGNC Symbol;Acc:HGNC:25150]
41. BFIV21 BFIV21 30 0.938 - - - - - - - 0.938 - -
42. ZNF507 ENSGALG00000004532 78 0.938 - - - - - - - 0.938 - - zinc finger protein 507, transcript variant X2
43. BBS9 ENSGALG00000031650 13 0.935 - - - - - - - 0.935 - - Bardet-Biedl syndrome 9, transcript variant X5
44. RAD54L2 ENSGALG00000003243 187 0.933 - - - - - - - 0.933 - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
45. PTPRQ ENSGALG00000010935 626 0.922 - - - - - - - 0.922 - - protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
46. ENSGALG00000026756 ENSGALG00000026756 134 0.922 - - - - - - - 0.922 - -
47. IQUB ENSGALG00000008823 65 0.908 - - - - - - - 0.908 - - IQ motif and ubiquitin domain containing [Source:HGNC Symbol;Acc:HGNC:21995]
48. IKZF1 ENSGALG00000013086 58 0.902 - - - - - - - 0.902 - - IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
49. SSBP2 ENSGALG00000023089 131 0.893 - - - - - - - 0.893 - - single stranded DNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15831]
50. ENSGALG00000023735 ENSGALG00000023735 12 0.893 - - - - - - - 0.893 - -
51. LOC416530 ENSGALG00000005291 207 0.893 - - - - - - - 0.893 - - uncharacterized LOC416530, transcript variant X1
52. ECSCR ENSGALG00000024379 313 0.887 - - - - - - - 0.887 - - endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
53. gga-mir-2954 ENSGALG00000026107 462 0.878 - - - - - - - 0.878 - - gga-mir-2954 [Source:miRBase;Acc:MI0013634]
54. C15orf61 ENSGALG00000028141 56 0.875 - - - - - - - 0.875 - - chromosome 15 open reading frame 61 [Source:NCBI gene;Acc:101747767]
55. CLEC18B ENSGALG00000027183 284 0.873 - - - - - - - 0.873 - - C-type lectin domain family 18 member B, transcript variant X2
56. WNT4 ENSGALG00000041708 1277 0.87 - - - - - - - 0.870 - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
57. MLH3 ENSGALG00000010304 231 0.868 - - - - - - - 0.868 - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
58. FANCF ENSGALG00000003660 25 0.859 - - - - - - - 0.859 - - FA complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
59. UPRT ENSGALG00000007793 321 0.859 - - - - - - - 0.859 - - uracil phosphoribosyltransferase homolog [Source:NCBI gene;Acc:422327]
60. LHFP 167 0.845 - - - - - - - 0.845 - - lipoma HMGIC fusion partner
61. USH1C ENSGALG00000006192 63 0.83 - - - - - - - 0.830 - - USH1 protein network component harmonin [Source:HGNC Symbol;Acc:HGNC:12597]
62. CDK5RAP3 ENSGALG00000036452 693 0.828 - - - - - - - 0.828 - - CDK5 regulatory subunit associated protein 3 [Source:NCBI gene;Acc:430350]
63. PDZRN4 ENSGALG00000009530 832 0.828 - - - - - - - 0.828 - - PDZ domain containing ring finger 4 [Source:HGNC Symbol;Acc:HGNC:30552]
64. CAMKK1 ENSGALG00000001617 64 0.823 - - - - - 0.823 - - - - calcium/calmodulin dependent protein kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:1469]
65. USP48 ENSGALG00000030857 471 0.821 - - - - - - - 0.821 - - ubiquitin specific peptidase 48 [Source:NCBI gene;Acc:769457]
66. ELFN1 ENSGALG00000004209 114 0.817 - - - - - - - 0.817 - - extracellular leucine rich repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33154]
67. ENSGALG00000015857 ENSGALG00000015857 238 0.817 - - - - - 0.817 - - - -
68. SMYD3 ENSGALG00000010653 14 0.814 - - - - 0.814 - - - - - SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
69. LOC422308 ENSGALG00000007546 7 0.814 - - - - 0.814 - - - - - exocyst complex component 1-like
70. TMEM213 ENSGALG00000026974 3 0.814 - - - - 0.814 - - - - - transmembrane protein 213 [Source:HGNC Symbol;Acc:HGNC:27220]
71. ZBTB44 ENSGALG00000001341 3 0.814 - - - - 0.814 - - - - - zinc finger and BTB domain containing 44 [Source:HGNC Symbol;Acc:HGNC:25001]
72. MAML2 ENSGALG00000017199 13 0.814 - - - - 0.814 - - - - - mastermind like transcriptional coactivator 2 [Source:HGNC Symbol;Acc:HGNC:16259]
73. OTX2 ENSGALG00000034889 8 0.814 - - - - 0.814 - - - - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
74. ENSGALG00000005026 ENSGALG00000005026 9 0.814 - - - - 0.814 - - - - -
75. RHOC ENSGALG00000001569 53 0.814 - - - - 0.814 - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
76. DUSP13L ENSGALG00000005007 3 0.814 - - - - 0.814 - - - - - dual specificity protein phosphatase 13 isoform MDSP-like
77. GNPTG ENSGALG00000006441 50 0.814 - - - - 0.814 - - - - - N-acetylglucosamine-1-phosphate transferase gamma subunit [Source:NCBI gene;Acc:416591]
78. TSKU ENSGALG00000000761 10 0.814 - - - - 0.814 - - - - - tsukushi, small leucine rich proteoglycan [Source:NCBI gene;Acc:419088]
79. DIRAS2 ENSGALG00000005323 11 0.814 - - - - 0.814 - - - - - DIRAS family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:19323]
80. PSD ENSGALG00000042551 6 0.814 - - - - 0.814 - - - - - pleckstrin and Sec7 domain containing [Source:HGNC Symbol;Acc:HGNC:9507]
81. ATXN3 ENSGALG00000010766 48 0.814 - - - - 0.814 - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
82. KHDRBS2 ENSGALG00000016276 110 0.808 - - - - - - - 0.808 - - KH RNA binding domain containing, signal transduction associated 2 [Source:HGNC Symbol;Acc:HGNC:18114]
83. LITAF ENSGALG00000003217 7 0.808 - - - - - - - 0.808 - - lipopolysaccharide induced TNF factor [Source:NCBI gene;Acc:374125]
84. ALOX5 ENSGALG00000005857 73 0.808 - - - - - - - 0.808 - - arachidonate 5-lipoxygenase [Source:HGNC Symbol;Acc:HGNC:435]
85. MARVELD3 ENSGALG00000012886 155 0.806 - - - - - - - 0.806 - - MARVEL domain containing 3
86. INADL INADL 51 0.805 - - - - - 0.805 - - - -
87. TBC1D8B ENSGALG00000009040 75 0.802 - - - - - - - 0.802 - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
88. LRRC58 ENSGALG00000033186 15 0.799 - - - - - - - 0.799 - - leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]
89. ENSGALG00000021386 ENSGALG00000021386 29 0.797 - - - - - 0.797 - - - -
90. HNF4G ENSGALG00000042621 484 0.796 - - - - - - - 0.796 - - hepatocyte nuclear factor 4 gamma [Source:HGNC Symbol;Acc:HGNC:5026]
91. PROCA1 668 0.795 - - - - - - - 0.795 - - protein interacting with cyclin A1
92. FMNL2 ENSGALG00000012525 78 0.79 - - - - 0.790 - - - - - formin like 2 [Source:HGNC Symbol;Acc:HGNC:18267]
93. SS18L1 ENSGALG00000005145 14 0.79 - - - - 0.790 - - - - - SS18L1, nBAF chromatin remodeling complex subunit [Source:HGNC Symbol;Acc:HGNC:15592]
94. DSEL ENSGALG00000042505 92 0.789 - - - - - - - 0.789 - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
95. CPEB4 ENSGALG00000033512 779 0.789 - - - - - - - 0.789 - - cytoplasmic polyadenylation element binding protein 4 [Source:HGNC Symbol;Acc:HGNC:21747]
96. DSL1 DSL1 113 0.784 - - 0.784 - - - - - - -
97. TMEM154 ENSGALG00000023355 19 0.782 - - - - 0.782 - - - - - transmembrane protein 154 [Source:HGNC Symbol;Acc:HGNC:26489]
98. FAM96A ENSGALG00000026448 41 0.78 - - - - 0.780 - - - - - family with sequence similarity 96 member A [Source:NCBI gene;Acc:415571]
99. A1CF ENSGALG00000003765 36 0.779 - - - - - - - 0.779 - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
100. ISOC1 ENSGALG00000000161 46 0.779 - - - - - - - 0.779 - - isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24254]

There are 98 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA