Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ALKBH1

Gene Name Gene ID Reads Annotation
ALKBH1 ENSGALG00000010485 1828 alkB homolog 1, histone H2A dioxygenase [Source:NCBI gene;Acc:428898]











Genes with expression patterns similar to ALKBH1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ALKBH1 ENSGALG00000010485 1828 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 alkB homolog 1, histone H2A dioxygenase [Source:NCBI gene;Acc:428898]
2. MORN4 ENSGALG00000006149 7772 1.595 - - - - - - - 0.780 - 0.815 MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
3. DNAJC24 ENSGALG00000012130 1882 1.53 - - - - 0.745 - - - - 0.785 DnaJ heat shock protein family (Hsp40) member C24 [Source:NCBI gene;Acc:421603]
4. ARHGAP11A ENSGALG00000009731 6817 1.522 - - - - - - 0.706 - - 0.816 Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
5. ATR ENSGALG00000002663 4626 1.442 - - - - - - 0.729 0.713 - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
6. BIK ENSGALG00000014164 1139 1.427 - - - - - - - 0.709 - 0.718 BCL2 interacting killer [Source:NCBI gene;Acc:776149]
7. TOR1AIP1 ENSGALG00000029238 5843 1.426 - - - - - - 0.722 - - 0.704 torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
8. CREPT CREPT 17142 0.897 - - - - - - - - - 0.897
9. LIMK1 ENSGALG00000001076 1931 0.893 - - - - - - - - - 0.893 LIM domain kinase 1 [Source:NCBI gene;Acc:373922]
10. STAT5 STAT5 1796 0.885 - - - - - - - - - 0.885
11. C15H12ORF49 C15H12ORF49 13250 0.883 - - - - - - - - - 0.883
12. MBD4 ENSGALG00000020747 3644 0.871 - - - - - - - - - 0.871 methyl-CpG binding domain 4, DNA glycosylase [Source:NCBI gene;Acc:395428]
13. FAM96B 14435 0.869 - - - - - - - - - 0.869 family with sequence similarity 96 member B
14. SHPK ENSGALG00000004637 2386 0.868 - - - - - - - - - 0.868 sedoheptulokinase, transcript variant X1
15. FTSJ3 ENSGALG00000032993 8929 0.868 - - - - - - - - - 0.868 FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
16. RGP1 ENSGALG00000002394 5937 0.866 - - - - - - - - - 0.866 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
17. CEP57 ENSGALG00000017201 524 0.865 - - - - - - - - - 0.865 centrosomal protein 57 [Source:HGNC Symbol;Acc:HGNC:30794]
18. RP9 ENSGALG00000035453 1186 0.864 - - - - - - - - - 0.864 retinitis pigmentosa 9 (autosomal dominant)
19. ADARB1 ENSGALG00000007527 2480 0.861 - - - - - - - - - 0.861 adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
20. VAV2 ENSGALG00000002699 503 0.86 - - - - - - - - - 0.860 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
21. RFWD3 2315 0.858 - - - - - - - - - 0.858 ring finger and WD repeat domain 3
22. TNFRSF21 ENSGALG00000016719 2762 0.857 - - - - - - - - - 0.857 TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
23. ZNF142 ENSGALG00000011393 2078 0.857 - - - - - - - - - 0.857 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
24. ADAMTS12 55 0.856 - - - - - - - - - 0.856 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
25. GRPEL2 ENSGALG00000002673 105 0.856 - - - - - - - - - 0.856 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
26. ZFPM2 ENSGALG00000040079 942 0.855 - - - - - - - - - 0.855 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
27. CENPJ ENSGALG00000017148 1415 0.854 - - - - - - - - - 0.854 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
28. TTI1 ENSGALG00000006791 1218 0.854 - - - - - - - - - 0.854 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
29. DUSP23 1663 0.854 - - - - - - - - - 0.854 dual specificity phosphatase 23, transcript variant X1
30. PCMTD2 ENSGALG00000005901 1833 0.854 - - - - - - - - - 0.854 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
31. ENSGALG00000024104 ENSGALG00000024104 1051 0.852 - - - - - - - - - 0.852
32. SUPV3L1 ENSGALG00000004197 4141 0.852 - - - - - - - - - 0.852 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
33. AP3B2 2331 0.852 - - - - - - - - - 0.852 adaptor related protein complex 3 beta 2 subunit, transcript variant X7
34. MAP3K3 ENSGALG00000000525 115 0.851 - - - - - - - - - 0.851 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
35. STX6 3297 0.851 - - - - - - - - - 0.851 syntaxin 6
36. PTPRE ENSGALG00000009823 250 0.851 - - - - - - - - - 0.851 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
37. ENSGALG00000001919 ENSGALG00000001919 531 0.85 - - - - - - - - - 0.850
38. IFNAR2 ENSGALG00000041867 1596 0.848 - - - - - - - - - 0.848 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
39. ENSGALG00000018358 ENSGALG00000018358 101 0.848 - - - - - - - - - 0.848
40. RPRD2 ENSGALG00000014656 939 0.847 - - - - - - - - - 0.847 regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
41. EEA1 ENSGALG00000011280 923 0.847 - - - - - - - - - 0.847 early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
42. TRIP4 ENSGALG00000030672 1255 0.847 - - - - - - - - - 0.847 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:HGNC:12310]
43. CENPV ENSGALG00000004503 3032 0.846 - - - - - - - - - 0.846 centromere protein V
44. APH1AL ENSGALG00000002578 2000 0.845 - - - - - - - - - 0.845 gamma-secretase subunit APH-1A-like
45. OBFC1 OBFC1 1071 0.845 - - - - - - - - - 0.845
46. MAP3K8 ENSGALG00000007356 188 0.844 - - - - - - - - - 0.844 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
47. AGMO ENSGALG00000010792 76 0.844 - - - - - - - - - 0.844 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
48. ELL2 ENSGALG00000014678 1111 0.844 - - - - - - - - - 0.844 elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
49. TM6SF2 ENSGALG00000029015 109 0.843 - - - - - - - - - 0.843 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
50. HPS4 ENSGALG00000005595 2217 0.842 - - - - - - - - - 0.842 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:HGNC Symbol;Acc:HGNC:15844]
51. UBE3C ENSGALG00000006461 57 0.842 - - - - - - - - - 0.842 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
52. DTX2 ENSGALG00000001905 1475 0.842 - - - - - - - - - 0.842 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
53. ZFHX3 ENSGALG00000000713 2340 0.841 - - - - - - - - - 0.841 zinc finger homeobox 3 [Source:NCBI gene;Acc:395682]
54. CAPN15 ENSGALG00000002018 3353 0.841 - - - - - - - - - 0.841 calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
55. USP36 ENSGALG00000037018 783 0.841 - - - - - - - - - 0.841 ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:HGNC:20062]
56. ENSGALG00000004772 ENSGALG00000004772 173 0.841 - - - - - - - - - 0.841
57. SOS2 ENSGALG00000012273 41 0.841 - - - - - - - - - 0.841 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
58. ENSGALG00000008594 ENSGALG00000008594 54 0.84 - - - - - - - - - 0.840
59. TYSND1 ENSGALG00000033807 716 0.84 - - - - - - - - - 0.840 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
60. CNKSR3 ENSGALG00000027159 41 0.84 - - - - - - - - - 0.840 CNKSR family member 3, transcript variant X2
61. ATP2B2 ENSGALG00000030908 584 0.839 - - - - - - - - - 0.839 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
62. ANKRA2 ENSGALG00000013511 3460 0.838 - - - - - - - - - 0.838 ankyrin repeat family A member 2 [Source:NCBI gene;Acc:426153]
63. BCOR ENSGALG00000016245 85 0.838 - - - - - - - - - 0.838 BCL6 corepressor, transcript variant X8
64. TFG ENSGALG00000015299 849 0.837 - - - - - - - - - 0.837 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
65. PRR11 2624 0.836 - - - - - - - - - 0.836 proline rich 11, transcript variant X8
66. CTCF 10811 0.836 - - - - - - - - - 0.836 CCCTC-binding factor, transcript variant X2
67. FOXP1 127 0.836 - - - - - - - - - 0.836 forkhead box P1, transcript variant X14
68. MYCL ENSGALG00000024047 10367 0.836 - - - - - - - - - 0.836 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
69. CTK-1 CTK-1 1618 0.836 - - - - - - - - - 0.836
70. SLC38A1 ENSGALG00000009698 566 0.835 - - - - - - - - - 0.835 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
71. PMVK ENSGALG00000046656 645 0.834 - - - - - - - - - 0.834 phosphomevalonate kinase [Source:HGNC Symbol;Acc:HGNC:9141]
72. NPR3 ENSGALG00000017405 2500 0.834 - - - - - - - - - 0.834 natriuretic peptide receptor 3 [Source:HGNC Symbol;Acc:HGNC:7945]
73. ENSGALG00000004643 ENSGALG00000004643 2297 0.833 - - - - - - - - - 0.833
74. FN3K ENSGALG00000001531 208 0.833 - - - - - - - - - 0.833 fructosamine 3 kinase [Source:HGNC Symbol;Acc:HGNC:24822]
75. INTS8 ENSGALG00000037955 3349 0.833 - - - - - - - - - 0.833 integrator complex subunit 8 [Source:NCBI gene;Acc:420230]
76. USP14 ENSGALG00000014920 18778 0.832 - - - - - - - - - 0.832 ubiquitin specific peptidase 14 [Source:HGNC Symbol;Acc:HGNC:12612]
77. PROCR ENSGALG00000006547 645 0.832 - - - - - - - - - 0.832 protein C receptor [Source:NCBI gene;Acc:424867]
78. MID1 ENSGALG00000038504 1684 0.831 - - - - - - - - - 0.831 midline 1 [Source:NCBI gene;Acc:373920]
79. SAP130 ENSGALG00000002070 9814 0.831 - - - - - - - - - 0.831 Sin3A associated protein 130 [Source:NCBI gene;Acc:424756]
80. IMPA2 ENSGALG00000013814 4202 0.83 - - - - - - - - - 0.830 inositol monophosphatase 2 [Source:HGNC Symbol;Acc:HGNC:6051]
81. CDC42 ENSGALG00000004796 59878 0.83 - - - - - - - - - 0.830 cell division cycle 42 [Source:NCBI gene;Acc:395917]
82. NFKBIE ENSGALG00000044525 633 0.829 - - - - - - - - - 0.829 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
83. COL12A1 ENSGALG00000015908 1300 0.828 - - - - - - - - - 0.828 collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
84. DGKB ENSGALG00000033561 170 0.827 - - - - - - - - - 0.827 diacylglycerol kinase beta [Source:HGNC Symbol;Acc:HGNC:2850]
85. SERPINB6 ENSGALG00000012866 1582 0.827 - - - - - - - - - 0.827 serpin family B member 6 [Source:NCBI gene;Acc:420895]
86. ENSGALG00000027621 ENSGALG00000027621 863 0.826 - - - - - - - - - 0.826
87. EP3 EP3 741 0.826 - - - - - - - - - 0.826
88. CMIP ENSGALG00000038494 5016 0.825 - - - - - - - - - 0.825 c-Maf inducing protein [Source:HGNC Symbol;Acc:HGNC:24319]
89. TMEM199 ENSGALG00000023757 10781 0.825 - - - - - - - - - 0.825 transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
90. TRIM24 ENSGALG00000012823 2725 0.822 - - - - - - - - - 0.822 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
91. NHLRC2 ENSGALG00000008946 387 0.822 - - - - - - - - - 0.822 NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
92. RPGR ENSGALG00000036284 186 0.821 - - - - - - - - - 0.821 retinitis pigmentosa GTPase regulator [Source:HGNC Symbol;Acc:HGNC:10295]
93. PLXNA4 ENSGALG00000006473 125 0.821 - - - - - - - - - 0.821 plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
94. GPR114 GPR114 46 0.821 - - - - - - - - - 0.821
95. PDCD4 ENSGALG00000008700 574 0.82 - - - - - - - - - 0.820 programmed cell death 4 [Source:NCBI gene;Acc:374191]
96. PSMG3 ENSGALG00000004203 11240 0.819 - - - - - - - - - 0.819 proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
97. PPP1CC ENSGALG00000004571 14748 0.818 - - - - - - - - - 0.818 protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
98. CCBL2 CCBL2 184 0.817 - - - - - - - - - 0.817
99. USE1 ENSGALG00000003703 4680 0.817 - - - - - - - - - 0.817 unconventional SNARE in the ER 1 [Source:NCBI gene;Acc:420134]
100. LRP5 ENSGALG00000029533 385 0.816 - - - - - - - - - 0.816 LDL receptor related protein 5 [Source:NCBI gene;Acc:423114]

There are 353 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA