Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for AL954137.2

Gene Name Gene ID Reads Annotation
AL954137.2 ENSDARG00000114408 104506










Genes with expression patterns similar to AL954137.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. AL954137.2 ENSDARG00000114408 104506 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. marcksb ENSDARG00000008803 42949 3.162 0.818 - - - - - 0.773 0.796 0.775 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
3. ran ENSDARG00000057026 54670 3.081 0.839 - - - 0.703 - - 0.779 0.760 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
4. hmgn2 ENSDARG00000099572 110168 2.33 0.729 - - 0.752 - - - 0.849 - high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
5. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.327 - 0.756 - - - - - 0.816 0.755 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
6. h3f3a 66671 2.252 - - - - 0.755 0.747 - 0.750 - H3 histone, family 3A, transcript variant X1
7. khsrp ENSDARG00000026489 15738 2.239 - 0.741 - - - - - 0.779 0.719 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
8. rrm1 ENSDARG00000014017 7296 2.156 - - - 0.710 0.721 - - - 0.725 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
9. HNRNPAB HNRNPAB 22267 1.668 - - - - - - - 0.874 0.794
10. hdac1 ENSDARG00000015427 19804 1.639 - - - - - - - 0.911 0.728 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
11. ptmab ENSDARG00000101766 182812 1.639 - - - 0.751 - - - 0.888 - prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
12. hmga1a ENSDARG00000028335 254077 1.638 - - - - 0.721 - - 0.917 - high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
13. prpf40a ENSDARG00000058467 6565 1.62 - 0.890 - - - - - - 0.730 PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
14. hnrnpm ENSDARG00000061735 19428 1.62 - - - - - - - 0.848 0.772 heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
15. cirbp cirbp 88363 1.614 - - - - - - 0.723 0.891 -
16. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.612 - - - - - - - 0.819 0.793 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
17. CR936437.1 CR936437.1 6465 1.604 - - - - - - - 0.829 0.775
18. hmgb1b ENSDARG00000030479 10398 1.588 - - - - 0.729 - - 0.859 - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
19. ywhah ENSDARG00000005560 11079 1.575 - - - - - 0.766 - 0.809 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-2191]
20. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.573 - - - - - - - 0.781 0.792 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
21. hmgb2b ENSDARG00000053990 11519 1.572 - - - - - - - 0.778 0.794 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
22. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.57 - - - - - - - 0.775 0.795 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
23. tmpob ENSDARG00000022978 8121 1.562 - - - - - - - 0.787 0.775 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
24. tmem35 ENSDARG00000052567 5685 1.562 - - - - - - - 0.789 0.773 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
25. top1l ENSDARG00000070545 40529 1.561 - - - - 0.843 - - 0.718 - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
26. cfl1 ENSDARG00000021124 78399 1.555 - - - - - 0.739 - 0.816 - cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
27. tubb5 ENSDARG00000037997 18691 1.55 - 0.750 - - - 0.800 - - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
28. hnrnpub ENSDARG00000004735 16496 1.546 - - - - - - - 0.726 0.820 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
29. whsc1l1 8544 1.538 - - - - - - - 0.769 0.769 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
30. marcksl1b ENSDARG00000035715 37390 1.536 - - - - - - - 0.736 0.800 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
31. pnrc2 ENSDARG00000053291, ENSDARG00000112537 50848 1.531 - - - - 0.732 - - 0.799 - proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
32. sumo3a ENSDARG00000028119 13447 1.517 - 0.744 - - - - - - 0.773 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
33. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.515 - - - - - - - 0.725 0.790 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
34. zgc:101846 15202 1.506 - 0.792 - - - - - 0.714 - zgc:101846
35. tox ENSDARG00000032317 9126 1.506 - - - - - - - 0.748 0.758 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
36. fabp7a ENSDARG00000007697 5211 1.504 - 0.705 - - - - - 0.799 - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
37. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 1.501 - - - - - - - 0.761 0.740 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
38. tuba1c ENSDARG00000055216 8384 1.498 - - - - - - - 0.718 0.780 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
39. ddx39ab ENSDARG00000015111 11619 1.494 - - - - - - - 0.779 0.715 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
40. bcl11ab ENSDARG00000063153 3032 1.49 - - - - - - - 0.710 0.780 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
41. mcm2 ENSDARG00000102798 8148 1.489 - 0.755 - - - - - - 0.734 minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
42. wu:fc51f04 wu:fc51f04 7074 1.488 - - - 0.713 - - - - 0.775
43. dla ENSDARG00000010791 9281 1.474 - - - - - - - 0.737 0.737 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
44. vezf1a ENSDARG00000008247 1449 1.466 - - - 0.705 - - - - 0.761 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
45. mdka ENSDARG00000036036 23084 1.463 0.736 - - - - 0.727 - - - midkine a [Source:ZFIN;Acc:ZDB-GENE-990621-1]
46. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 1.458 - - - - - - 0.703 - 0.755 serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
47. insm1b ENSDARG00000053301 2032 1.457 - - - - - - - 0.712 0.745 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
48. SNRPG ENSDARG00000099667 18697 1.454 0.739 - - - - - - - 0.715 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
49. kif11 ENSDARG00000010948 4973 1.44 - - - - - - - 0.725 0.715 kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
50. nova2 ENSDARG00000017673 7685 1.431 - - - 0.707 - - - - 0.724 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
51. h2afva ENSDARG00000068820 16427 1.429 0.710 - - - - - - 0.719 - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
52. carm1 ENSDARG00000018698 5599 1.426 - - - - - - - 0.715 0.711 coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
53. LPHN2 LPHN2 1971 1.425 - - - 0.702 - - - - 0.723
54. hnrnpab hnrnpab 72354 0.917 - - - - - - - 0.917 -
55. ppiaa ENSDARG00000009212 290634 0.888 - - - - - - - 0.888 - peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
56. hbbe3 ENSDARG00000038147, ENSDARG00000109344 102871 0.876 - - - - - - 0.876 - - hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
57. ddx5 ENSDARG00000038068 35302 0.862 - - - - - - - 0.862 - DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
58. eif4g2b ENSDARG00000057167 22982 0.856 - - - - - 0.856 - - - eukaryotic translation initiation factor 4, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6550]
59. stmn1b ENSDARG00000033655 9491 0.856 - - - - - - - 0.856 - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
60. TUBA1A ENSDARG00000001889 25294 0.848 - - - - - - - 0.848 - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
61. pabpc1a ENSDARG00000017219 95045 0.847 - - - - 0.847 - - - - poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
62. sox3 ENSDARG00000053569 12016 0.842 - - - - - - - 0.842 - SRY (sex determining region Y)-box 3 [Source:ZFIN;Acc:ZDB-GENE-980526-333]
63. nucks1a ENSDARG00000078473 28285 0.841 - - - - - - - 0.841 - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
64. khdrbs1a ENSDARG00000052856 53666 0.828 - - - - - - - 0.828 - KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
65. ccni ENSDARG00000068214 17558 0.826 - - - - - 0.826 - - - cyclin I [Source:ZFIN;Acc:ZDB-GENE-040426-2898]
66. hsp90ab1 ENSDARG00000029150 102372 0.822 - - - - - - - 0.822 - heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
67. smarca5 ENSDARG00000052348 15433 0.819 - - - - - - - - 0.819 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
68. hes6 ENSDARG00000019335 4754 0.812 - - - - - - - 0.812 - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
69. si:dkey-235h8.1 si:dkey-235h8.1 2457 0.811 - - - - - - - - 0.811
70. hoxb9a ENSDARG00000056023 11856 0.808 - - - - - 0.808 - - - homeobox B9a [Source:ZFIN;Acc:ZDB-GENE-990415-109]
71. srsf2a ENSDARG00000057484 25721 0.805 - - - - - - - - 0.805 serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
72. pcna ENSDARG00000054155 89521 0.799 - - - - 0.799 - - - - proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
73. marcksa ENSDARG00000004049 2518 0.799 - - - - - - - - 0.799 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
74. UBE2D2 ENSDARG00000043484 11723 0.798 - - - - - - - 0.798 - ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-120312-1]
75. hnrnpa0a ENSDARG00000089302 45675 0.798 - - - - - - - 0.798 - heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
76. zgc:112425 zgc:112425 293873 0.795 - - - - - - - 0.795 -
77. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 0.795 - - - - - - - - 0.795 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
78. eif3f ENSDARG00000077533 24387 0.794 - - - - - 0.794 - - - eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
79. SCML2 ENSDARG00000012949 1310 0.793 - - - - - - - - 0.793 Scm polycomb group protein like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-546]
80. HNRNPA2B1 HNRNPA2B1 14997 0.792 - - - - - 0.792 - - -
81. celf3a ENSDARG00000034668 2432 0.785 - - - - - - - - 0.785 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
82. TMEM57 TMEM57 260 0.784 - - - - - - - - 0.784
83. rbb4 rbb4 15541 0.781 - - - - - - - - 0.781
84. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 0.78 - - - - - - - 0.780 - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
85. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 0.78 - - - - - - - - 0.780 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
86. atp1b2a ENSDARG00000099203 4010 0.779 - - - - - 0.779 - - - ATPase Na+/K+ transporting subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-001127-2]
87. zbtb18 ENSDARG00000028228 3653 0.778 - - - - - - - - 0.778 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
88. h3f3b.1_1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 26947 0.778 - - - - - 0.778 - - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
89. rps27.1 ENSDARG00000023298 86382 0.775 - - - - - - - 0.775 - ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
90. seta ENSDARG00000031495 39977 0.774 - - - - - - - 0.774 - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
91. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 0.773 - - - - - - - - 0.773 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
92. zgc:158409 zgc:158409 21963 0.773 - - - - - - - 0.773 -
93. rpl23a ENSDARG00000006316 59831 0.772 - - - - - 0.772 - - - ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
94. ezh2 ENSDARG00000010571 3273 0.772 - - - - - - - - 0.772 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
95. dpysl5a ENSDARG00000011141 1827 0.772 - - - - - - - - 0.772 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
96. hmgb3a ENSDARG00000056725 15668 0.771 - - - - - - - - 0.771 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
97. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 0.771 - - - - - - - - 0.771 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
98. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 0.77 - - - - - - - - 0.770 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
99. arf2 arf2 12369 0.77 - - - - - 0.770 - - -
100. ptp4a1 ENSDARG00000006242 10267 0.77 - - - - - 0.770 - - - protein tyrosine phosphatase type IVA, member 1 [Source:ZFIN;Acc:ZDB-GENE-041121-11]

There are 254 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA