Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for AIRC

Gene Name Gene ID Reads Annotation
AIRC AIRC 15851











Genes with expression patterns similar to AIRC

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. AIRC AIRC 15851 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. MRPL19 ENSGALG00000016731 22670 0.931 - - - - - - 0.931 - - - mitochondrial ribosomal protein L19, transcript variant X1
3. PTBP1 ENSGALG00000001962 66983 0.919 - - - - - - 0.919 - - - polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:420098]
4. MINOS1 ENSGALG00000004039 37740 0.917 - - - - - - 0.917 - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
5. SNORA72 SNORA72 27695 0.916 - - - - - - 0.916 - - -
6. FAM96B 14435 0.914 - - - - - - 0.914 - - - family with sequence similarity 96 member B
7. COPS4 ENSGALG00000011130 21515 0.912 - - - - - - 0.912 - - - COP9 signalosome subunit 4 [Source:NCBI gene;Acc:422594]
8. ADH5 ENSGALG00000012245 38217 0.905 - - - - - - 0.905 - - - alcohol dehydrogenase 5 (class III), chi polypeptide [Source:NCBI gene;Acc:422705]
9. PSMC2 ENSGALG00000008236 25980 0.904 - - - - - - 0.904 - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
10. CREPT CREPT 17142 0.898 - - - - - - 0.898 - - -
11. SPTBN1 ENSGALG00000029512 18579 0.893 - - - - - - 0.893 - - - spectrin beta, non-erythrocytic 1 [Source:NCBI gene;Acc:421216]
12. PRPS1 ENSGALG00000004908 27994 0.888 - - - - - - 0.888 - - - phosphoribosyl pyrophosphate synthetase 1
13. UBR7 ENSGALG00000010842 16488 0.888 - - - - - - 0.888 - - - Gallus gallus ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318461]
14. TP53BP2 ENSGALG00000042816 12368 0.887 - - - - - - 0.887 - - - tumor protein p53 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:12000]
15. MAGOH 28688 0.883 - - - - - - 0.883 - - - mago homolog, exon junction complex core component
16. MGST1 ENSGALG00000013098 17632 0.883 - - - - - - 0.883 - - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
17. EIF3M ENSGALG00000012109 38661 0.88 - - - - - - 0.880 - - - eukaryotic translation initiation factor 3 subunit M [Source:NCBI gene;Acc:421602]
18. GABPA ENSGALG00000015763 11567 0.879 - - - - - - 0.879 - - - GA binding protein transcription factor subunit alpha [Source:NCBI gene;Acc:418478]
19. MCM4 ENSGALG00000012915 13151 0.878 - - - - - - 0.878 - - - minichromosome maintenance complex component 4
20. CLTA ENSGALG00000015326 26867 0.875 - - - - - - 0.875 - - - clathrin light chain A [Source:NCBI gene;Acc:427284]
21. MRPL44 ENSGALG00000003067 15256 0.874 - - - - - - 0.874 - - - mitochondrial ribosomal protein L44 [Source:NCBI gene;Acc:424795]
22. VMP1 ENSGALG00000005160 12859 0.873 - - - - - - 0.873 - - - vacuole membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:29559]
23. DNAJC15 ENSGALG00000016965 9163 0.871 - - - - - - 0.871 - - - DnaJ heat shock protein family (Hsp40) member C15 [Source:NCBI gene;Acc:418838]
24. HADH ENSGALG00000016124 18216 0.87 - - - - - - 0.870 - - - hydroxyacyl-CoA dehydrogenase [Source:NCBI gene;Acc:420290]
25. PSMA6 ENSGALG00000010060 26517 0.87 - - - - - - 0.870 - - - proteasome subunit alpha 6 [Source:NCBI gene;Acc:423326]
26. ENSGALG00000007509 ENSGALG00000007509 18441 0.863 - - - - - - 0.863 - - -
27. KARS ENSGALG00000000907 51247 0.858 - - - - - - 0.858 - - - lysyl-tRNA synthetase [Source:NCBI gene;Acc:415885]
28. TCP1 ENSGALG00000011637 73216 0.858 - - - - - - 0.858 - - - t-complex 1 [Source:NCBI gene;Acc:421586]
29. FUNDC1 ENSGALG00000028187 10511 0.855 - - - - - - 0.855 - - - FUN14 domain containing 1 [Source:NCBI gene;Acc:418558]
30. ACO2 ENSGALG00000011950 30387 0.854 - - - - - - 0.854 - - - aconitase 2 [Source:NCBI gene;Acc:374009]
31. TRAM1 ENSGALG00000041112 22876 0.854 - - - - - - 0.854 - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
32. ID2 ENSGALG00000035016 22120 0.851 - - - - - - 0.851 - - - inhibitor of DNA binding 2, HLH protein [Source:NCBI gene;Acc:395852]
33. PRMT3 ENSGALG00000003958 14160 0.847 - - - - - - 0.847 - - - protein arginine methyltransferase 3 [Source:NCBI gene;Acc:422975]
34. PEPD ENSGALG00000004899 9785 0.846 - - - - - - 0.846 - - - peptidase D [Source:NCBI gene;Acc:415776]
35. COX7A2L ENSGALG00000037996 13646 0.846 - - - - - - 0.846 - - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
36. TKT ENSGALG00000005309 19801 0.845 - - - - - - 0.845 - - - transketolase [Source:HGNC Symbol;Acc:HGNC:11834]
37. TALDO1 ENSGALG00000037195 30673 0.844 - - - - - - 0.844 - - - transaldolase 1 [Source:NCBI gene;Acc:423019]
38. NDUFB10 ENSGALG00000005465 41984 0.84 - - - - - - 0.840 - - - NADH:ubiquinone oxidoreductase subunit B10 [Source:HGNC Symbol;Acc:HGNC:7696]
39. COPE ENSGALG00000003153 19444 0.84 - - - - - - 0.840 - - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
40. GCLM ENSGALG00000005782 15789 0.836 - - - - - - 0.836 - - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
41. ACAA2 ENSGALG00000031142 29220 0.834 - - - - - - 0.834 - - - acetyl-CoA acyltransferase 2 [Source:NCBI gene;Acc:426847]
42. GPX1 ENSGALG00000028204 62935 0.832 - - - - - - 0.832 - - - glutathione peroxidase 1 [Source:NCBI gene;Acc:100857115]
43. KIF15 ENSGALG00000036645 9946 0.832 - - - - - - 0.832 - - - kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]
44. NAA25 ENSGALG00000041821 12729 0.83 - - - - - - 0.830 - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
45. NARS ENSGALG00000040506 9506 0.829 - - - - - - 0.829 - - - asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
46. HNRNPR ENSGALG00000000814 32290 0.826 - - - - - - 0.826 - - - heterogeneous nuclear ribonucleoprotein R [Source:NCBI gene;Acc:419570]
47. LARP1 ENSGALG00000040109 14808 0.824 - - - - - - 0.824 - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
48. SFT2D1 ENSGALG00000020005 10855 0.822 - - - - - - 0.822 - - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
49. PSMB3 ENSGALG00000001597 22588 0.822 - - - - - - 0.822 - - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
50. SOD2 ENSGALG00000011661 13178 0.821 - - - - - - 0.821 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
51. CNOT7 ENSGALG00000013649 23435 0.82 - - - - - - 0.820 - - - CCR4-NOT transcription complex subunit 7 [Source:NCBI gene;Acc:422733]
52. KIF20A ENSGALG00000035030 10249 0.819 - - - - - - 0.819 - - - kinesin family member 20A [Source:NCBI gene;Acc:416220]
53. ATRX ENSGALG00000007843 34172 0.818 - - - - - - 0.818 - - - ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
54. CRMP1B CRMP1B 18633 0.816 - - - - - - 0.816 - - -
55. ARL6IP5 ENSGALG00000038904 12956 0.816 - - - - - - 0.816 - - - ADP ribosylation factor like GTPase 6 interacting protein 5 [Source:NCBI gene;Acc:426074]
56. STK4 ENSGALG00000004098 11366 0.816 - - - - - - 0.816 - - - serine/threonine kinase 4 [Source:NCBI gene;Acc:419187]
57. GFM1 ENSGALG00000009634 7213 0.815 - - - - - - 0.815 - - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
58. TM9SF3 ENSGALG00000005534 15290 0.814 - - - - - - 0.814 - - - transmembrane 9 superfamily member 3
59. POR ENSGALG00000002053 5223 0.814 - - - - - - 0.814 - - - cytochrome p450 oxidoreductase [Source:NCBI gene;Acc:417520]
60. RCC2 ENSGALG00000031684 28067 0.811 - - - - - - 0.811 - - - regulator of chromosome condensation 2 [Source:HGNC Symbol;Acc:HGNC:30297]
61. UBA3 ENSGALG00000013410 6923 0.811 - - - - - - 0.811 - - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
62. LAP3 ENSGALG00000006334 21076 0.81 - - - - - - 0.810 - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
63. GTF2E1 ENSGALG00000042320 7712 0.81 - - - - - - 0.810 - - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
64. NRD1 NRD1 10827 0.809 - - - - - - 0.809 - - -
65. BTAF1 ENSGALG00000030598 3556 0.807 - - - - - - 0.807 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
66. PMM2 ENSGALG00000007326 8260 0.805 - - - - - - 0.805 - - - phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
67. NDUFS6 ENSGALG00000013191 15874 0.804 - - - - - - 0.804 - - - NADH:ubiquinone oxidoreductase subunit S6 [Source:HGNC Symbol;Acc:HGNC:7713]
68. CLPTM1L ENSGALG00000013187 9733 0.804 - - - - - - 0.804 - - - CLPTM1 like [Source:NCBI gene;Acc:420973]
69. MRPS11 ENSGALG00000006777 16009 0.804 - - - - - - 0.804 - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
70. ARPC4 ENSGALG00000006691 33311 0.802 - - - - - - 0.802 - - - actin related protein 2/3 complex subunit 4 [Source:NCBI gene;Acc:416051]
71. PEBP1 ENSGALG00000007403 77502 0.801 - - - - - - 0.801 - - - phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
72. TOP2B ENSGALG00000011300 25048 0.798 - - - - - - 0.798 - - - DNA topoisomerase 2-beta [Source:NCBI gene;Acc:395966]
73. WBP11 ENSGALG00000011745 11182 0.797 - - - - - - 0.797 - - - WW domain binding protein 11, transcript variant X1
74. STX2 ENSGALG00000002536 10438 0.796 - - - - - - 0.796 - - - syntaxin 2 [Source:NCBI gene;Acc:378895]
75. SNRPF ENSGALG00000011409 23557 0.794 - - - - - - 0.794 - - - small nuclear ribonucleoprotein polypeptide F [Source:NCBI gene;Acc:417916]
76. SDF4 ENSGALG00000001872 6382 0.791 - - - - - - 0.791 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
77. NDUFA9 ENSGALG00000017282 14358 0.79 - - - - - - 0.790 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
78. LTBP3 LTBP3 13316 0.789 - - - - - - 0.789 - - -
79. UTP3 ENSGALG00000011553 8814 0.787 - - - - - - 0.787 - - - UTP3, small subunit processome component homolog (S. cerevisiae)
80. NUSAP1 ENSGALG00000008584 9955 0.786 - - - - - - - 0.786 - - nucleolar and spindle associated protein 1 [Source:NCBI gene;Acc:423213]
81. NCOA4 ENSGALG00000002066 10544 0.776 - - - - - - 0.776 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
82. MED7 ENSGALG00000003870 4244 0.771 - - - - - - 0.771 - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
83. ZMYM2 ENSGALG00000017139 3747 0.77 - - - - - - 0.770 - - - zinc finger MYM-type containing 2, transcript variant X10
84. SF3A3 ENSGALG00000001540 9664 0.768 - - - - - - 0.768 - - - splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
85. RPL27 ENSGALG00000002837 302752 0.768 - - - - - - - 0.768 - - ribosomal protein L27 [Source:NCBI gene;Acc:396280]
86. ALDH4A1 ENSGALG00000042184 9432 0.767 - - - - - - 0.767 - - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
87. ARNT2 ENSGALG00000006445 7050 0.766 - - - - - - 0.766 - - - aryl hydrocarbon receptor nuclear translocator 2 [Source:HGNC Symbol;Acc:HGNC:16876]
88. XPA ENSGALG00000028998 8621 0.765 - - - - - - 0.765 - - - XPA, DNA damage recognition and repair factor [Source:NCBI gene;Acc:395659]
89. SEMA4B ENSGALG00000008297 11202 0.765 - - - - - - 0.765 - - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
90. BPTF ENSGALG00000038222 7521 0.764 - - - - - - 0.764 - - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
91. HDGFL3 ENSGALG00000006036 13576 0.764 - - - - - - 0.764 - - - HDGF like 3 [Source:HGNC Symbol;Acc:HGNC:24937]
92. CCND1 ENSGALG00000007555 6715 0.763 - - - - - - 0.763 - - - cyclin D1 [Source:NCBI gene;Acc:396341]
93. PTDSS1 ENSGALG00000030185 5515 0.763 - - - - - - 0.763 - - - phosphatidylserine synthase 1 [Source:NCBI gene;Acc:428374]
94. E2F6 ENSGALG00000016454 4747 0.763 - - - - - - 0.763 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
95. COL4A1 ENSGALG00000036798 12749 0.76 - - - - - - 0.760 - - - collagen type IV alpha 1 chain [Source:NCBI gene;Acc:395530]
96. SLC25A14 ENSGALG00000004063 5574 0.759 - - - - - - 0.759 - - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
97. RAB20 ENSGALG00000016844 3250 0.759 - - - - - - 0.759 - - - RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
98. RBM12B ENSGALG00000035129 4314 0.758 - - - - - - 0.758 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
99. DYNC1LI1 ENSGALG00000011491 11011 0.757 - - - - - - 0.757 - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
100. OGFOD1 6926 0.757 - - - - - - 0.757 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1

There are 65 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA