Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for AGO3

Gene Name Gene ID Reads Annotation
AGO3 ENSGALG00000043711 5086 argonaute 3, RISC catalytic component [Source:NCBI gene;Acc:419628]











Genes with expression patterns similar to AGO3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. AGO3 ENSGALG00000043711 5086 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 argonaute 3, RISC catalytic component [Source:NCBI gene;Acc:419628]
2. WDR3 ENSGALG00000014791 5856 1.59 - - - - - - 0.877 0.713 - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
3. TRAPPC6B ENSGALG00000010157 7567 1.531 - - - - - - 0.777 0.754 - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
4. DNM1L ENSGALG00000012929 6174 1.519 - - - - - - 0.724 0.795 - - dynamin 1 like [Source:NCBI gene;Acc:418132]
5. HOXA5 ENSGALG00000025929 6231 1.506 - - - - - - 0.788 0.718 - - homeobox A5 [Source:NCBI gene;Acc:100858404]
6. TRRAP ENSGALG00000003596 6032 1.473 - - - - - - 0.726 0.747 - - transformation/transcription domain associated protein [Source:HGNC Symbol;Acc:HGNC:12347]
7. KIF11 ENSGALG00000030597 5528 1.472 - - - - - - 0.730 0.742 - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
8. NRIP1 ENSGALG00000015681 10711 1.47 - - - - - - 0.741 0.729 - - nuclear receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8001]
9. SRSF1 ENSGALG00000005525 4376 1.464 - - - - - - 0.726 0.738 - - serine and arginine rich splicing factor 1 [Source:NCBI gene;Acc:772264]
10. YRDC ENSGALG00000029001 6529 1.449 - - - - - - 0.722 0.727 - - yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
11. DSCR3 3583 1.446 - - - - - - 0.706 0.740 - - DSCR3 arrestin fold containing, transcript variant X1
12. FAM63B 3793 1.412 - - - - - - 0.707 0.705 - - family with sequence similarity 63 member B
13. SREK1 ENSGALG00000014775 13961 0.845 - - - - - - - 0.845 - - splicing regulatory glutamic acid and lysine rich protein 1, transcript variant X3
14. VRK1 ENSGALG00000011116 4524 0.844 - - - - - - 0.844 - - - vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]
15. SP3 ENSGALG00000031796 8997 0.83 - - - - - - 0.830 - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
16. DESI2 ENSGALG00000010678 4590 0.816 - - - - - - - 0.816 - - desumoylating isopeptidase 2 [Source:NCBI gene;Acc:421494]
17. BEND4 2292 0.814 - - - - - - 0.814 - - - BEN domain containing 4, transcript variant X1
18. MSH2 ENSGALG00000008962 9709 0.814 - - - - - - - 0.814 - - mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
19. INCENP ENSGALG00000007537 16617 0.814 - - - - - - - 0.814 - - inner centromere protein [Source:NCBI gene;Acc:396270]
20. PLK1 ENSGALG00000006110 12892 0.811 - - - - - - - 0.811 - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
21. CYB5B ENSGALG00000000660 9733 0.811 - - - - - - 0.811 - - - cytochrome b5 type B [Source:NCBI gene;Acc:415865]
22. ENSGALG00000007514 ENSGALG00000007514 4866 0.811 - - - - - - - 0.811 - -
23. MAK16 ENSGALG00000001663 7455 0.811 - - - - - - 0.811 - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
24. PTTG1 17936 0.809 - - - - - - 0.809 - - - pituitary tumor-transforming 1, transcript variant X1
25. EMC3 ENSGALG00000003738 10363 0.808 - - - - - - - 0.808 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
26. METTL14 ENSGALG00000012000 5876 0.807 - - - - - - 0.807 - - - methyltransferase like 14 [Source:NCBI gene;Acc:422684]
27. DCPS ENSGALG00000031143 10191 0.803 - - - - - - - 0.803 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
28. AZIN1 ENSGALG00000029295 11085 0.802 - - - - - - - 0.802 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
29. ERLIN2 ENSGALG00000003092 18251 0.8 - - - - - - - 0.800 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
30. MOB3A ENSGALG00000031729 9690 0.8 - - - - - - - 0.800 - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
31. WHSC1L1 4065 0.799 - - - - - - 0.799 - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
32. CTDSPL2 ENSGALG00000008199 3534 0.798 - - - - - - - 0.798 - - CTD small phosphatase like 2 [Source:NCBI gene;Acc:415574]
33. FAM125B FAM125B 2953 0.795 - - - - - - 0.795 - - -
34. EIF4G3 ENSGALG00000010084 5881 0.795 - - - - - - - 0.795 - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
35. SMAD1 ENSGALG00000009977 3540 0.795 - - - - - - 0.795 - - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
36. EAPP ENSGALG00000010007 5080 0.792 - - - - - - 0.792 - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
37. NUFIP1 ENSGALG00000016972 3616 0.788 - - - - - - 0.788 - - - NUFIP1, FMR1 interacting protein 1 [Source:NCBI gene;Acc:418841]
38. NKRF ENSGALG00000008645 3531 0.788 - - - - - - 0.788 - - - NFKB repressing factor [Source:NCBI gene;Acc:422370]
39. SLC30A5 ENSGALG00000014787 5573 0.788 - - - - - - 0.788 - - - solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
40. FUT8 ENSGALG00000036443 5589 0.786 - - - - - - - 0.786 - - fucosyltransferase 8 [Source:NCBI gene;Acc:423178]
41. CHMP4B ENSGALG00000002095 17422 0.785 - - - - - - - 0.785 - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
42. MAP1B ENSGALG00000014999 6288 0.785 - - - - - - - 0.785 - - microtubule associated protein 1B
43. NSFL1C ENSGALG00000006182 2381 0.784 - - - - - - - 0.784 - - NSFL1 cofactor [Source:NCBI gene;Acc:419268]
44. ENSGALG00000026802 ENSGALG00000026802 14688 0.784 - - - - - - - 0.784 - -
45. SNAP29 ENSGALG00000040128 3581 0.784 - - - - - - 0.784 - - - synaptosome associated protein 29 [Source:NCBI gene;Acc:416766]
46. THOC1 ENSGALG00000014915 5846 0.783 - - - - - - - 0.783 - - Gallus gallus THO complex 1 (THOC1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001321610]
47. CENPW ENSGALG00000027454 7517 0.783 - - - - - - 0.783 - - - centromere protein W [Source:NCBI gene;Acc:421716]
48. PSMD13 ENSGALG00000043684 14720 0.783 - - - - - - - 0.783 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
49. RABEPK ENSGALG00000042210 4492 0.782 - - - - - - - 0.782 - - Rab9 effector protein with kelch motifs [Source:NCBI gene;Acc:772357]
50. DCTN4 ENSGALG00000004534 8442 0.782 - - - - - - - 0.782 - - dynactin subunit 4 [Source:HGNC Symbol;Acc:HGNC:15518]
51. SMDT1 ENSGALG00000011897 9360 0.782 - - - - - - 0.782 - - - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
52. RAB21 ENSGALG00000010183 7718 0.782 - - - - - - 0.782 - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
53. TDP2 ENSGALG00000013637 6595 0.781 - - - - - - - 0.781 - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
54. ARHGAP19 ENSGALG00000007609 3655 0.78 - - - - - - - 0.780 - - Rho GTPase activating protein 19 [Source:NCBI gene;Acc:423846]
55. DNMT3A ENSGALG00000041454 9607 0.78 - - - - - - - 0.780 - - DNA methyltransferase 3 alpha [Source:NCBI gene;Acc:421991]
56. ARID4B ENSGALG00000034003 5364 0.779 - - - - - - 0.779 - - - AT-rich interaction domain 4B [Source:HGNC Symbol;Acc:HGNC:15550]
57. NR2C1 ENSGALG00000011327 5109 0.779 - - - - - - 0.779 - - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
58. TM4SF18 4553 0.778 - - - - - - - 0.778 - - transmembrane 4 L six family member 18, transcript variant X2
59. NAA20 ENSGALG00000012587 11349 0.778 - - - - - - - 0.778 - - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
60. TIMM8A ENSGALG00000004963 14263 0.777 - - - - - - - 0.777 - - translocase of inner mitochondrial membrane 8A [Source:NCBI gene;Acc:422190]
61. FKBP7 ENSGALG00000009149 6742 0.775 - - - - - - - 0.775 - - FK506 binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3723]
62. NOP14 ENSGALG00000015649 7039 0.775 - - - - - - 0.775 - - - NOP14 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:16821]
63. KIF18A ENSGALG00000012160 2612 0.774 - - - - - - 0.774 - - - kinesin family member 18A [Source:NCBI gene;Acc:421607]
64. KTN1 ENSGALG00000012137 4058 0.773 - - - - - - - 0.773 - - kinectin 1 [Source:NCBI gene;Acc:396335]
65. SYAP1 ENSGALG00000016548 3347 0.773 - - - - - - 0.773 - - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
66. EGLN1 ENSGALG00000041422 11032 0.772 - - - - - - 0.772 - - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
67. ENSGALG00000006784 ENSGALG00000006784 1926 0.772 - - - - - - - 0.772 - -
68. CACTIN ENSGALG00000024391 1408 0.772 - - - - - - 0.772 - - - cactin, spliceosome C complex subunit [Source:HGNC Symbol;Acc:HGNC:29938]
69. SETD3 ENSGALG00000034802 4125 0.772 - - - - - - 0.772 - - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
70. DMD ENSGALG00000016281 5657 0.771 - - - - - - 0.771 - - - dystrophin [Source:NCBI gene;Acc:396236]
71. DGCR6 ENSGALG00000027369 7882 0.771 - - - - - - 0.771 - - - DiGeorge syndrome critical region gene 6 [Source:NCBI gene;Acc:395907]
72. CELF1 ENSGALG00000008097 4717 0.771 - - - - - - - 0.771 - - CUGBP Elav-like family member 1 [Source:NCBI gene;Acc:373923]
73. NUP93 ENSGALG00000003010 16504 0.771 - - - - - - - 0.771 - - nucleoporin 93 [Source:NCBI gene;Acc:415693]
74. SLC12A4 ENSGALG00000034179 5674 0.769 - - - - - - - 0.769 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
75. PCM1 ENSGALG00000013602 6347 0.769 - - - - - - - 0.769 - - pericentriolar material 1 [Source:NCBI gene;Acc:395204]
76. RTCB ENSGALG00000012611 14360 0.769 - - - - - - 0.769 - - - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:HGNC:26935]
77. MRPL2 ENSGALG00000008597 16500 0.768 - - - - - - - 0.768 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
78. CLK1 ENSGALG00000028438 3550 0.767 - - - - - - - 0.767 - - CDC like kinase 1 [Source:HGNC Symbol;Acc:HGNC:2068]
79. GNAI2 ENSGALG00000035645 9535 0.767 - - - - - - - 0.767 - - G protein subunit alpha i2 [Source:HGNC Symbol;Acc:HGNC:4385]
80. KIAA0020 KIAA0020 14353 0.767 - - - - - - 0.767 - - -
81. UBE3A ENSGALG00000034944 5196 0.767 - - - - - - 0.767 - - - ubiquitin protein ligase E3A [Source:HGNC Symbol;Acc:HGNC:12496]
82. LAPTM4A ENSGALG00000016479 15973 0.767 - - - - - - 0.767 - - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
83. ATP1B3 ENSGALG00000002764 1890 0.767 - - - - - - 0.767 - - - ATPase Na+/K+ transporting subunit beta 3 [Source:NCBI gene;Acc:396549]
84. NENF ENSGALG00000009821 4826 0.766 - - - - - - - 0.766 - - neudesin neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:30384]
85. PSMB3 ENSGALG00000001597 22588 0.766 - - - - - - - 0.766 - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
86. EPHA7 ENSGALG00000015593 1173 0.765 - - - - - - 0.765 - - - EPH receptor A7 [Source:NCBI gene;Acc:395967]
87. PICK1 ENSGALG00000041823 3843 0.765 - - - - - - 0.765 - - - protein interacting with PRKCA 1 [Source:HGNC Symbol;Acc:HGNC:9394]
88. CROT ENSGALG00000008813 8052 0.765 - - - - - - - 0.765 - - carnitine O-octanoyltransferase [Source:HGNC Symbol;Acc:HGNC:2366]
89. C2H6orf52 ENSGALG00000012721 3631 0.765 - - - - - - 0.765 - - - chromosome 2 C6orf52 homolog [Source:NCBI gene;Acc:420849]
90. OSTC ENSGALG00000010526 19422 0.765 - - - - - - 0.765 - - - oligosaccharyltransferase complex non-catalytic subunit [Source:NCBI gene;Acc:422525]
91. TBPL1 ENSGALG00000013981 3710 0.765 - - - - - - - 0.765 - - TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
92. PRRC2C 3925 0.761 - - - - - - 0.761 - - - proline rich coiled-coil 2C, transcript variant X17
93. SEC14L1 ENSGALG00000001684 2776 0.761 - - - - - - 0.761 - - - SEC14 like lipid binding 1 [Source:HGNC Symbol;Acc:HGNC:10698]
94. SLC25A20 ENSGALG00000028227 7685 0.761 - - - - - - 0.761 - - - solute carrier family 25 member 20 [Source:HGNC Symbol;Acc:HGNC:1421]
95. TFDP1 ENSGALG00000016823 17019 0.761 - - - - - - 0.761 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
96. MNAT1 ENSGALG00000011910 6809 0.76 - - - - - - - 0.760 - - MNAT1, CDK activating kinase assembly factor [Source:HGNC Symbol;Acc:HGNC:7181]
97. SIPA1L1 ENSGALG00000009381 4019 0.76 - - - - - - - 0.760 - - signal induced proliferation associated 1 like 1 [Source:NCBI gene;Acc:423255]
98. TIMMDC1 ENSGALG00000024480 9337 0.76 - - - - - - - 0.760 - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
99. MAEA ENSGALG00000013310 13230 0.76 - - - - - - - 0.760 - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
100. HMGXB4 ENSGALG00000044768 6005 0.759 - - - - - - - 0.759 - - HMG-box containing 4 [Source:HGNC Symbol;Acc:HGNC:5003]

There are 250 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA