Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for AGGF1

Gene Name Gene ID Reads Annotation
AGGF1 ENSGALG00000004311 3011 angiogenic factor with G-patch and FHA domains 1, transcript variant X1











Genes with expression patterns similar to AGGF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. AGGF1 ENSGALG00000004311 3011 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
2. UBN1 ENSGALG00000031416 2848 2.54 - - 0.785 - - - - 0.921 - 0.834 ubinuclein 1 [Source:NCBI gene;Acc:416398]
3. CAMSAP1 ENSGALG00000001692 2617 2.383 - - 0.727 - - - - 0.799 - 0.857 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
4. TXNDC11 ENSGALG00000003154 2224 1.895 - - - - - - - 0.929 - 0.966 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
5. CPT2 ENSGALG00000010681 3211 1.871 - - - - - - - 0.906 - 0.965 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
6. POLR1B ENSGALG00000032273 3845 1.815 - - - - - - - 0.877 - 0.938 RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
7. MYOCD ENSGALG00000001021 351 1.78 - - - - - - - 0.795 - 0.985 myocardin [Source:NCBI gene;Acc:427790]
8. RAD50 ENSGALG00000006794 4308 1.768 - - 0.798 - - - - - - 0.970 RAD50 double strand break repair protein, transcript variant X4
9. CKAP2 ENSGALG00000017025 25020 1.754 - - 0.788 - - - - - - 0.966 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
10. TANK ENSGALG00000011131 3382 1.747 - - - - - - - 0.851 - 0.896 TRAF family member associated NFKB activator [Source:NCBI gene;Acc:424190]
11. SPDL1 ENSGALG00000001942 4403 1.744 - - 0.773 - - - - - - 0.971 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
12. PTX3 ENSGALG00000028284 2984 1.734 - - - - - - - 0.752 - 0.982 pentraxin 3 [Source:NCBI gene;Acc:548626]
13. WHSC1 1712 1.734 - - 0.755 - - - - - - 0.979 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
14. HDAC2 ENSGALG00000014991 23458 1.728 - - 0.781 - - - - - - 0.947 histone deacetylase 2 [Source:NCBI gene;Acc:395635]
15. FZD6 ENSGALG00000030626 3336 1.726 - - 0.792 - - - - - - 0.934 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
16. CASP8AP2 ENSGALG00000015611 5657 1.722 - - 0.774 - - - - - - 0.948 caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
17. PRPF38B ENSGALG00000001972 2009 1.718 - - 0.792 - - - - - - 0.926 pre-mRNA processing factor 38B
18. HYAL3 ENSGALG00000029000 712 1.714 - - 0.737 - - - - - - 0.977 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
19. QSER1 ENSGALG00000012030 4490 1.705 - - 0.844 - - - - - - 0.861 glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
20. VPS13D ENSGALG00000034777 2350 1.695 - - 0.794 - - - - 0.901 - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
21. HYAL1 ENSGALG00000000785 1778 1.682 - - 0.746 - - - - 0.936 - - hyaluronoglucosaminidase 1, transcript variant X3
22. PDE3B ENSGALG00000006035 3732 1.678 - - - - - - - 0.785 - 0.893 phosphodiesterase 3B [Source:NCBI gene;Acc:423064]
23. ATP6V0C ENSGALG00000009229 125870 1.676 - - 0.726 - - - - - - 0.950 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
24. NAA30 ENSGALG00000012098 4681 1.675 - - 0.788 - - - - - - 0.887 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
25. TCTN2 ENSGALG00000023683 3596 1.672 - - 0.748 - - - - 0.924 - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
26. PCYOX1 ENSGALG00000013878 2200 1.672 - - 0.725 - - - - 0.947 - - prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:HGNC:20588]
27. SLK ENSGALG00000008318 2220 1.667 - - 0.793 - - - - - - 0.874 STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
28. WBP4 ENSGALG00000016949 5858 1.659 - - 0.820 - - - - - - 0.839 WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
29. SLC39A6 ENSGALG00000013209 1754 1.651 - - 0.746 - - - - - - 0.905 solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
30. TPX2 ENSGALG00000006267 26087 1.641 - - 0.714 - - - - - - 0.927 TPX2, microtubule nucleation factor [Source:NCBI gene;Acc:395081]
31. TWSG1 ENSGALG00000008400 1869 1.635 - - 0.751 - - - - - - 0.884 twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
32. PDLIM7 ENSGALG00000026159 4700 1.628 - - 0.834 - - - - 0.794 - - PDZ and LIM domain 7 [Source:NCBI gene;Acc:416362]
33. CDCA7 ENSGALG00000040833 7484 1.605 - - - - - - 0.786 - - 0.819 cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
34. SP3 ENSGALG00000031796 8997 1.598 - - 0.777 - - - - - - 0.821 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
35. ZC3H11A ENSGALG00000000541 2712 1.597 - - 0.770 - - - - - - 0.827 zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
36. TIAR TIAR 2471 1.591 - - 0.746 - - - - - - 0.845
37. SNX12 ENSGALG00000005659 9503 1.586 - - - - - - - 0.843 - 0.743 sorting nexin 12 [Source:NCBI gene;Acc:428704]
38. GTF2F2 ENSGALG00000016974 7524 1.582 - - - - - - 0.701 - - 0.881 general transcription factor IIF subunit 2 [Source:HGNC Symbol;Acc:HGNC:4653]
39. LIMS1 ENSGALG00000029970 7244 1.579 - - - - - - - 0.878 - 0.701 LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
40. EAPP ENSGALG00000010007 5080 1.572 - - 0.767 - - - - - - 0.805 E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
41. RNH1 ENSGALG00000006904 14542 1.567 - - - - - - 0.728 0.839 - - ribonuclease/angiogenin inhibitor 1 [Source:NCBI gene;Acc:423111]
42. UBE2E3 ENSGALG00000020793 9517 1.56 - - 0.763 - - - - - - 0.797 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
43. NDC80 ENSGALG00000014801 3237 1.558 - - 0.713 - - - - - - 0.845 NDC80, kinetochore complex component [Source:NCBI gene;Acc:395134]
44. FBXL17 ENSGALG00000000276 2443 1.558 - - - - - - 0.712 0.846 - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
45. GTPBP4 ENSGALG00000006703 16183 1.544 - - - - - - - 0.767 - 0.777 GTP binding protein 4 [Source:NCBI gene;Acc:420458]
46. BAZ1A ENSGALG00000010030 3626 1.541 - - 0.783 - - - - - - 0.758 bromodomain adjacent to zinc finger domain 1A [Source:HGNC Symbol;Acc:HGNC:960]
47. C9orf64 ENSGALG00000012589 6097 1.533 - - - - - - - 0.768 - 0.765 chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
48. CYB5R2 ENSGALG00000032372 7967 1.533 - - - - - - 0.716 0.817 - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
49. GTF2E1 ENSGALG00000042320 7712 1.53 - - 0.713 - - - - - - 0.817 general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
50. FTD FTD 3041 1.524 - - 0.731 - - - - - - 0.793
51. PRPF40A ENSGALG00000012526 7724 1.521 - - 0.765 - - - - 0.756 - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
52. GLB1L2 ENSGALG00000001604 4057 1.512 - - 0.749 - - - 0.763 - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
53. MTMR8 ENSGALG00000007590 6022 1.511 - - - - - - - 0.705 - 0.806 myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
54. PPP2R5C ENSGALG00000029996 5759 1.499 - - - - - - - - 0.710 0.789 protein phosphatase 2 regulatory subunit B'gamma [Source:NCBI gene;Acc:423460]
55. MYCBP2 ENSGALG00000016915 2374 1.498 - - 0.730 - - - - - - 0.768 MYC binding protein 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:23386]
56. KCNK5 ENSGALG00000034077 3233 1.476 - - - - - - 0.757 - - 0.719 potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
57. SENP6 ENSGALG00000015901 8013 1.473 - - 0.734 - - - 0.739 - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
58. ARID3B ENSGALG00000001376 4290 1.458 - - 0.709 - - - - - - 0.749 AT-rich interaction domain 3B [Source:NCBI gene;Acc:100859297]
59. MTSS1 ENSGALG00000041969 1312 0.995 - - - - - - - - - 0.995 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
60. PROM1 ENSGALG00000014496 2494 0.992 - - - - - - - - - 0.992 prominin 1 [Source:NCBI gene;Acc:422825]
61. 5S_2 5S_2 58 0.991 - - - - - - - - - 0.991
62. CXADR ENSGALG00000015701 96 0.991 - - - - - - - - - 0.991 coxsackie virus and adenovirus receptor, transcript variant X2
63. APBA3 ENSGALG00000000740 1249 0.991 - - - - - - - - - 0.991 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
64. FAM190B FAM190B 165 0.991 - - - - - - - - - 0.991
65. CPNE2 ENSGALG00000001316 236 0.991 - - - - - - - - - 0.991 copine 2 [Source:NCBI gene;Acc:415646]
66. IL10R2 IL10R2 72 0.991 - - - - - - - - - 0.991
67. ZNF6 ZNF6 138 0.991 - - - - - - - - - 0.991
68. DIAPH3 ENSGALG00000016937 1069 0.99 - - - - - - - - - 0.990 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
69. SOX6 ENSGALG00000006074 102 0.99 - - - - - - - - - 0.990 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
70. ARHGAP21 ENSGALG00000007721 3961 0.99 - - - - - - - - - 0.990 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
71. MSI1 ENSGALG00000007227 2279 0.989 - - - - - - - - - 0.989 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
72. AURKA ENSGALG00000007768 793 0.989 - - - - - - - - - 0.989 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
73. ITSN2 ENSGALG00000016504 651 0.989 - - - - - - - - - 0.989 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
74. SSH1 ENSGALG00000004928 222 0.989 - - - - - - - - - 0.989 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
75. BRD1 ENSGALG00000029379 6047 0.989 - - - - - - - - - 0.989 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
76. FASTKD3 ENSGALG00000033521 1186 0.989 - - - - - - - - - 0.989 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
77. NARS ENSGALG00000040506 9506 0.989 - - - - - - - - - 0.989 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
78. PLA2G15 ENSGALG00000041787 762 0.987 - - - - - - - - - 0.987 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
79. PCLO 249 0.986 - - - - - - - - - 0.986 piccolo presynaptic cytomatrix protein
80. MB21D1 2460 0.986 - - - - - - - - - 0.986 Mab-21 domain containing 1
81. CASKIN1 604 0.986 - - - - - - - - - 0.986 CASK interacting protein 1, transcript variant X4
82. PM20D2 ENSGALG00000015779 1301 0.986 - - - - - - - - - 0.986 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
83. WDSUB1 ENSGALG00000012574 2038 0.986 - - - - - - - - - 0.986 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
84. ACADL ENSGALG00000002891 8058 0.986 - - - - - - - - - 0.986 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
85. CCDC88A ENSGALG00000043587 2208 0.985 - - - - - - - - - 0.985 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
86. FSTL4 ENSGALG00000031487 529 0.985 - - - - - - - - - 0.985 follistatin like 4 [Source:NCBI gene;Acc:395163]
87. ITGA9 ENSGALG00000029378 415 0.985 - - - - - - - - - 0.985 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
88. CNTRL ENSGALG00000001513 1773 0.984 - - - - - - - - - 0.984 centriolin [Source:NCBI gene;Acc:417121]
89. RWDD2B ENSGALG00000015807 3601 0.984 - - - - - - - - - 0.984 RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
90. CDH1-A CDH1-A 343 0.983 - - - - - - - - - 0.983
91. C14orf80 C14orf80 1921 0.983 - - - - - - - - - 0.983
92. LAMP2 ENSGALG00000008572 198 0.983 - - - - - - - - - 0.983 lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
93. FAM129A ENSGALG00000004812 269 0.983 - - - - - - - - - 0.983 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
94. CRYM ENSGALG00000002484 3558 0.983 - - - - - - - - - 0.983 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
95. PDPN ENSGALG00000030096 647 0.981 - - - - - - - - - 0.981 podoplanin, transcript variant X4
96. PREX2 ENSGALG00000042354 134 0.981 - - - - - - - - - 0.981 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
97. SLC2A3 SLC2A3 527 0.981 - - - - - - - - - 0.981
98. GRK4 ENSGALG00000015645 1065 0.981 - - - - - - - - - 0.981 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
99. HAUS8 ENSGALG00000003727 351 0.981 - - - - - - - - - 0.981 HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
100. C10orf118 C10orf118 762 0.981 - - - - - - - - - 0.981

There are 860 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA