Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ACTR1A

Gene Name Gene ID Reads Annotation
ACTR1A ENSGALG00000008086 3145 ARP1 actin related protein 1 homolog A [Source:NCBI gene;Acc:423862]











Genes with expression patterns similar to ACTR1A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ACTR1A ENSGALG00000008086 3145 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ARP1 actin related protein 1 homolog A [Source:NCBI gene;Acc:423862]
2. COBRA1 COBRA1 4600 1.505 - - - - - - 0.729 0.776 - -
3. LSG1 ENSGALG00000007058 4591 1.5 - - - - - - 0.718 0.782 - - large 60S subunit nuclear export GTPase 1 [Source:NCBI gene;Acc:424897]
4. BPNT1 ENSGALG00000009576 7445 1.439 - - - - - - 0.725 0.714 - - 3'(2'), 5'-bisphosphate nucleotidase 1 [Source:NCBI gene;Acc:421347]
5. MORN4 ENSGALG00000006149 7772 0.821 - - - - - - - 0.821 - - MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
6. C11ORF75 C11ORF75 2874 0.814 - - - - - - - 0.814 - -
7. FNBP1L ENSGALG00000005850 9219 0.81 - - - - - - 0.810 - - - formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
8. MB ENSGALG00000012541 260 0.805 - - 0.805 - - - - - - - myoglobin [Source:NCBI gene;Acc:418056]
9. CDC40 ENSGALG00000015061 6118 0.801 - - - - - - 0.801 - - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
10. SREK1IP1 ENSGALG00000026028 5756 0.789 - - - - - - 0.789 - - - SREK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26716]
11. TCEA3 1423 0.784 - - - - - - - 0.784 - - transcription elongation factor A3, transcript variant X2
12. KDM3B ENSGALG00000007663 7189 0.779 - - - - - - 0.779 - - - lysine demethylase 3B [Source:HGNC Symbol;Acc:HGNC:1337]
13. STRN ENSGALG00000010580 7561 0.775 - - - - - - 0.775 - - - striatin [Source:HGNC Symbol;Acc:HGNC:11424]
14. DERL1 ENSGALG00000033950 15074 0.775 - - - - - - 0.775 - - - derlin 1 [Source:NCBI gene;Acc:420350]
15. NEO1 ENSGALG00000001774 10165 0.774 - - - - - - 0.774 - - - neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
16. NDUFB3 ENSGALG00000008239 15511 0.774 - - - - - - 0.774 - - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
17. AHSA1 ENSGALG00000010463 15252 0.774 - - - - - - 0.774 - - - activator of HSP90 ATPase activity 1 [Source:HGNC Symbol;Acc:HGNC:1189]
18. PREP ENSGALG00000015405 17050 0.774 - - - - - - 0.774 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
19. HMGB3 ENSGALG00000009071 12011 0.773 - - - - - - 0.773 - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
20. KRR1 ENSGALG00000010227 11783 0.772 - - - - - - 0.772 - - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
21. SPDL1 ENSGALG00000001942 4403 0.771 - - - - - - - 0.771 - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
22. ACP6 ENSGALG00000015485 3147 0.77 - - - - - - - 0.770 - - acid phosphatase 6, lysophosphatidic [Source:NCBI gene;Acc:418458]
23. HINT3 ENSGALG00000044342 5674 0.767 - - - - - - - 0.767 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
24. KTN1 ENSGALG00000012137 4058 0.766 - - - - - - 0.766 - - - kinectin 1 [Source:NCBI gene;Acc:396335]
25. RFC1 ENSGALG00000014298 6516 0.764 - - - - - - 0.764 - - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
26. SLMO2 SLMO2 9207 0.764 - - - - - - - 0.764 - -
27. ATL2 ENSGALG00000037289 7926 0.763 - - - - - - - 0.763 - - atlastin GTPase 2 [Source:HGNC Symbol;Acc:HGNC:24047]
28. MRPL47 ENSGALG00000013759 9044 0.763 - - - - - - 0.763 - - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
29. MRPL2 ENSGALG00000008597 16500 0.762 - - - - - - 0.762 - - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
30. CASP6 ENSGALG00000012186 6639 0.76 - - - - - - - 0.760 - - caspase 6 [Source:NCBI gene;Acc:395477]
31. GCSH ENSGALG00000032679 29231 0.76 - - - - - - - 0.760 - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
32. CRNKL1 ENSGALG00000008429 7280 0.759 - - - - - - 0.759 - - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
33. EIF2B4 ENSGALG00000033575 3801 0.758 - - - - - - 0.758 - - - eukaryotic translation initiation factor 2B subunit delta [Source:HGNC Symbol;Acc:HGNC:3260]
34. SSR1 ENSGALG00000012798 62626 0.757 - - - - - - - 0.757 - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
35. TXNL4B ENSGALG00000015327 1505 0.754 - - 0.754 - - - - - - - thioredoxin like 4B [Source:NCBI gene;Acc:418396]
36. TPRKB ENSGALG00000013018 8687 0.753 - - - - - - 0.753 - - - TP53RK binding protein [Source:HGNC Symbol;Acc:HGNC:24259]
37. NENF ENSGALG00000009821 4826 0.753 - - - - - - - 0.753 - - neudesin neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:30384]
38. TBC1D31 ENSGALG00000030460 2027 0.751 - - - - - - 0.751 - - - TBC1 domain family member 31 [Source:HGNC Symbol;Acc:HGNC:30888]
39. TRMT5 ENSGALG00000011904 1857 0.75 - - - - - - 0.750 - - - tRNA methyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:23141]
40. CDK2AP1 ENSGALG00000034919 5469 0.75 - - - - - - - 0.750 - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
41. LAPTM4A ENSGALG00000016479 15973 0.75 - - - - - - 0.750 - - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
42. ASUN ASUN 17129 0.749 - - - - - - 0.749 - - -
43. CCNH ENSGALG00000015641 8051 0.749 - - - - - - 0.749 - - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
44. UBR5 ENSGALG00000031282 12143 0.749 - - - - - - 0.749 - - - ubiquitin protein ligase E3 component n-recognin 5 [Source:HGNC Symbol;Acc:HGNC:16806]
45. ENSGALG00000009516 ENSGALG00000009516 5256 0.749 - - - - - - 0.749 - - -
46. ADRM1 ENSGALG00000005200 5417 0.749 - - - - - - - 0.749 - - adhesion regulating molecule 1 [Source:NCBI gene;Acc:395365]
47. RSRC1 ENSGALG00000009669 5829 0.748 - - - - - - 0.748 - - - arginine and serine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:24152]
48. FAM18B1 ENSGALG00000001335 5177 0.748 - - - - - - - 0.748 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
49. SIVA1 ENSGALG00000011619 15130 0.747 - - - - - - 0.747 - - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
50. CNOT8 ENSGALG00000003950 8271 0.746 - - - - - - 0.746 - - - CCR4-NOT transcription complex subunit 8 [Source:NCBI gene;Acc:416255]
51. DCPS ENSGALG00000031143 10191 0.746 - - - - - - 0.746 - - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
52. CCDC59 ENSGALG00000028648 9272 0.746 - - - - - - 0.746 - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
53. AIMP2 ENSGALG00000003400 12655 0.745 - - - - - - 0.745 - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 2 [Source:HGNC Symbol;Acc:HGNC:20609]
54. VAT1 ENSGALG00000002818 10333 0.745 - - - - - - - - - 0.745 vesicle amine transport 1 [Source:HGNC Symbol;Acc:HGNC:16919]
55. LETM1 ENSGALG00000015706 2366 0.745 - - - - - - - 0.745 - - leucine zipper and EF-hand containing transmembrane protein 1 [Source:NCBI gene;Acc:422898]
56. RBM7 ENSGALG00000007017 8779 0.745 - - - - - - 0.745 - - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
57. C2CD2 ENSGALG00000016148 2734 0.744 - - 0.744 - - - - - - - C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]
58. DERA ENSGALG00000013095 4135 0.744 - - - - - - - 0.744 - - deoxyribose-phosphate aldolase [Source:NCBI gene;Acc:418176]
59. CCNC ENSGALG00000015471 6497 0.743 - - - - - - 0.743 - - - cyclin C [Source:NCBI gene;Acc:421791]
60. SEC22C ENSGALG00000005268 1151 0.742 - - - - - - 0.742 - - - SEC22 homolog C, vesicle trafficking protein [Source:HGNC Symbol;Acc:HGNC:16828]
61. RBM27 ENSGALG00000007516 3909 0.742 - - - - - - 0.742 - - - RNA binding motif protein 27, transcript variant X3
62. ZFAND4 ENSGALG00000005893 1415 0.741 - - - - - - 0.741 - - - zinc finger AN1-type containing 4 [Source:HGNC Symbol;Acc:HGNC:23504]
63. TFDP1 ENSGALG00000016823 17019 0.74 - - - - - - 0.740 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
64. RAB5C ENSGALG00000003359 5597 0.74 - - - - - - - 0.740 - - RAB5C, member RAS oncogene family [Source:NCBI gene;Acc:395197]
65. CEP44 ENSGALG00000020201 1060 0.74 - - - - - - - 0.740 - - centrosomal protein 44 [Source:HGNC Symbol;Acc:HGNC:29356]
66. KXD1 ENSGALG00000036736 3771 0.739 - - - - - - 0.739 - - - KxDL motif containing 1 [Source:HGNC Symbol;Acc:HGNC:28420]
67. ENSGALG00000009863 ENSGALG00000009863 7375 0.738 - - - - - - 0.738 - - -
68. SNRNP40 ENSGALG00000000615 32298 0.737 - - - - - - 0.737 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
69. N6AMT1 ENSGALG00000015802 5221 0.737 - - - - - - - 0.737 - - N-6 adenine-specific DNA methyltransferase 1 (putative) [Source:NCBI gene;Acc:418481]
70. TRAF7 ENSGALG00000005767 4615 0.736 - - - - - - 0.736 - - - TNF receptor associated factor 7 [Source:NCBI gene;Acc:416555]
71. COX17 ENSGALG00000014981 5646 0.736 - - - - - - 0.736 - - - COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
72. SYNE1 ENSGALG00000013505 2324 0.736 - - - - - - 0.736 - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
73. HSPA4 ENSGALG00000040882 20966 0.735 - - - - - - 0.735 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
74. POMP ENSGALG00000017090 5504 0.734 - - - - - - - 0.734 - - proteasome maturation protein [Source:HGNC Symbol;Acc:HGNC:20330]
75. MED21 ENSGALG00000027435 5766 0.734 - - - - - - - 0.734 - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
76. MRPL40 ENSGALG00000001587 20893 0.734 - - - - - - 0.734 - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
77. FGGY ENSGALG00000010879 1279 0.733 - - 0.733 - - - - - - - FGGY carbohydrate kinase domain containing [Source:HGNC Symbol;Acc:HGNC:25610]
78. C12H3ORF37 C12H3ORF37 6362 0.733 - - - - - - 0.733 - - -
79. NUP85 ENSGALG00000007974 21249 0.733 - - - - - - - 0.733 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
80. GGA.8379 GGA.8379 4419 0.733 - - - - - - - 0.733 - -
81. ENSGALG00000004132 ENSGALG00000004132 9287 0.733 - - - - - - 0.733 - - -
82. MAN1C1 ENSGALG00000001038 1679 0.732 - - - - - - 0.732 - - - mannosidase alpha class 1C member 1 [Source:HGNC Symbol;Acc:HGNC:19080]
83. HCCS ENSGALG00000005571 4939 0.732 - - - - - - 0.732 - - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
84. PRKACB ENSGALG00000028530 12506 0.732 - - - - - - - 0.732 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
85. LSM5 ENSGALG00000041625 22307 0.732 - - - - - - 0.732 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
86. CTNND2 ENSGALG00000013001 11217 0.731 - - - - - - 0.731 - - - catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
87. SLU7 ENSGALG00000034414 5386 0.731 - - - - - - - 0.731 - - SLU7 homolog, splicing factor [Source:NCBI gene;Acc:416157]
88. SUCLG2 ENSGALG00000007652 9688 0.731 - - - - - - 0.731 - - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
89. R3HDM1 ENSGALG00000012246 6580 0.731 - - - - - - 0.731 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
90. UBE2J2 ENSGALG00000001848 6527 0.73 - - - - - - 0.730 - - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
91. MRPS30 ENSGALG00000014874 3416 0.73 - - - - - - - 0.730 - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
92. FUNDC2 ENSGALG00000029585 9334 0.73 - - - - - - 0.730 - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
93. SIAH1 ENSGALG00000003916 6682 0.729 - - 0.729 - - - - - - - siah E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:10857]
94. NUDT7 ENSGALG00000034395 7396 0.728 - - - - - - - 0.728 - - nudix hydrolase 7 [Source:NCBI gene;Acc:415800]
95. MRPL38 ENSGALG00000002194 6648 0.727 - - - - - - 0.727 - - - mitochondrial ribosomal protein L38 [Source:NCBI gene;Acc:770172]
96. C1H12ORF23 C1H12ORF23 13234 0.727 - - - - - - 0.727 - - -
97. STT3A ENSGALG00000042730 7834 0.726 - - - - - - - 0.726 - - Gallus gallus STT3A, catalytic subunit of the oligosaccharyltransferase complex (STT3A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318991]
98. DNAL4 ENSGALG00000043451 4469 0.726 - - - - - - - 0.726 - - dynein axonemal light chain 4 [Source:NCBI gene;Acc:418019]
99. PHLDB1 ENSGALG00000040030 2423 0.725 - - - - - - - - 0.725 - pleckstrin homology like domain family B member 1 [Source:HGNC Symbol;Acc:HGNC:23697]
100. SEC22A ENSGALG00000011697 7981 0.725 - - - - - - - 0.725 - - SEC22 homolog A, vesicle trafficking protein [Source:NCBI gene;Acc:424250]

There are 97 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA