Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ACTN1

Gene Name Gene ID Reads Annotation
ACTN1 ENSGALG00000042458 10477 actinin, alpha 1 [Source:NCBI gene;Acc:373918]











Genes with expression patterns similar to ACTN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ACTN1 ENSGALG00000042458 10477 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 actinin, alpha 1 [Source:NCBI gene;Acc:373918]
2. SHISA5 ENSGALG00000004661 8573 2.325 - - - - 0.707 - 0.742 0.876 - - shisa family member 5 [Source:NCBI gene;Acc:415948]
3. CMPK CMPK 9569 1.814 - - - - - - 0.889 0.925 - -
4. WDR61 ENSGALG00000003221 11352 1.69 - - - - - - 0.759 0.931 - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
5. PES1 ENSGALG00000007778 12248 1.666 - - - - - - 0.754 0.912 - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
6. UBE2B ENSGALG00000032664 6069 1.663 - - - - - - 0.745 0.918 - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
7. CABIN1 ENSGALG00000006363 4415 1.661 - - - - - - 0.750 0.911 - - calcineurin binding protein 1 [Source:HGNC Symbol;Acc:HGNC:24187]
8. TET1 ENSGALG00000031604 13002 1.659 - - - - - - 0.776 0.883 - - tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
9. PPP2R5D ENSGALG00000040005 6804 1.654 - - - - - - 0.731 0.923 - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
10. CASK ENSGALG00000042400 8485 1.631 - - - - - - 0.758 0.873 - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
11. SPARC ENSGALG00000004184 36410 1.607 - - - - 0.821 - 0.786 - - - secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
12. NAV2 ENSGALG00000003999 6587 1.59 - - - - - - 0.839 0.751 - - neuron navigator 2 [Source:HGNC Symbol;Acc:HGNC:15997]
13. CDC40 ENSGALG00000015061 6118 1.558 - - - - - - 0.777 0.781 - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
14. ENSGALG00000009771 ENSGALG00000009771 10273 1.548 - - - - - - 0.841 0.707 - -
15. GATA6 ENSGALG00000014976 3256 1.546 - - - - - - - 0.815 0.731 - GATA binding protein 6 [Source:NCBI gene;Acc:396390]
16. DKC1 ENSGALG00000005054 30350 1.542 - - - - - - 0.747 0.795 - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
17. ENSGALG00000014171 ENSGALG00000014171 10383 1.537 - - - - - - 0.753 0.784 - -
18. CRTAP ENSGALG00000034163 6453 1.528 - - - - 0.717 - 0.811 - - - cartilage associated protein [Source:NCBI gene;Acc:395992]
19. TMEM184C ENSGALG00000010019 7856 1.526 - - - - - - 0.798 0.728 - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
20. HAPLN1 ENSGALG00000015627 14942 1.511 - - - - 0.726 - 0.785 - - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
21. NOA1 ENSGALG00000038585 2907 1.494 - - 0.735 - - - 0.759 - - - nitric oxide associated 1 [Source:HGNC Symbol;Acc:HGNC:28473]
22. CLN8 ENSGALG00000039606 4209 1.491 - - 0.700 - - - 0.791 - - - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
23. CARS ENSGALG00000006427 7660 1.489 - - - - - - 0.773 0.716 - - cysteinyl-tRNA synthetase [Source:NCBI gene;Acc:423086]
24. TXNDC12 ENSGALG00000010569 13822 1.486 - - 0.722 - - - - 0.764 - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
25. MYL9 ENSGALG00000028567 36256 1.484 - - - - 0.705 - 0.779 - - - myosin, light chain 9, regulatory [Source:NCBI gene;Acc:396215]
26. RRP1B ENSGALG00000035696 12309 1.482 - - 0.712 - - - 0.770 - - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
27. RUNX1T1 ENSGALG00000033091 17529 1.478 - - - - - - 0.709 0.769 - - RUNX1 translocation partner 1 [Source:NCBI gene;Acc:395503]
28. ZNF503 ENSGALG00000041935 2895 1.461 - - 0.743 - - - 0.718 - - - zinc finger protein 503 [Source:HGNC Symbol;Acc:HGNC:23589]
29. NDUFAF2 ENSGALG00000027564 7302 1.457 - - 0.733 - - - 0.724 - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
30. UBE2V1 ENSGALG00000008015 17947 1.444 - - 0.721 - - - 0.723 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
31. FARSB ENSGALG00000005236 10738 1.442 - - - - - - 0.704 0.738 - - phenylalanyl-tRNA synthetase subunit beta [Source:NCBI gene;Acc:424812]
32. PUM2 ENSGALG00000016481 23625 0.954 - - - - - - - 0.954 - - pumilio RNA binding family member 2 [Source:NCBI gene;Acc:421961]
33. SMNDC1 ENSGALG00000008561 14415 0.949 - - - - - - - 0.949 - - survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
34. SUCLG1 ENSGALG00000015961 14323 0.948 - - - - - - - 0.948 - - succinate-CoA ligase alpha subunit [Source:NCBI gene;Acc:422932]
35. DYNC1LI1 ENSGALG00000011491 11011 0.941 - - - - - - - 0.941 - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
36. POLR2H ENSGALG00000008534 21521 0.938 - - - - - - - 0.938 - - RNA polymerase II subunit H [Source:NCBI gene;Acc:424954]
37. SPINT1 ENSGALG00000008469 5735 0.931 - - - - - - - 0.931 - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
38. HLX ENSGALG00000037257 5834 0.931 - - - - - - - 0.931 - - H2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]
39. C28H19ORF10 C28H19ORF10 16529 0.929 - - - - - - - 0.929 - -
40. TAB2 ENSGALG00000012356 3467 0.927 - - - - - - - 0.927 - - TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17075]
41. DEK ENSGALG00000012684 14179 0.923 - - - - - - - 0.923 - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
42. XPR1 ENSGALG00000003893 5642 0.921 - - - - - - - 0.921 - - xenotropic and polytropic retrovirus receptor 1 [Source:HGNC Symbol;Acc:HGNC:12827]
43. C4orf46 ENSGALG00000009432 3255 0.92 - - - - - - - 0.920 - - chromosome 4 open reading frame 46 [Source:HGNC Symbol;Acc:HGNC:27320]
44. PDLIM1 ENSGALG00000005422 3385 0.919 - - - - - - - 0.919 - - PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:HGNC:2067]
45. LUC7L2 ENSGALG00000036238 11817 0.917 - - - - - - - 0.917 - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
46. EMC7 ENSGALG00000009637 4969 0.913 - - - - - - - 0.913 - - ER membrane protein complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:24301]
47. SDHA ENSGALG00000013167 6509 0.912 - - - - - - - 0.912 - - succinate dehydrogenase complex flavoprotein subunit A [Source:NCBI gene;Acc:395758]
48. SURF6 ENSGALG00000038413 11178 0.91 - - - - - - - 0.910 - - surfeit 6 [Source:NCBI gene;Acc:417160]
49. EIF1AY ENSGALG00000016410 6431 0.908 - - - - - - - 0.908 - - eukaryotic translation initiation factor 1A, Y-linked [Source:NCBI gene;Acc:418606]
50. ACTR3 ENSGALG00000012159 16020 0.906 - - - - - - - 0.906 - - ARP3 actin related protein 3 homolog [Source:NCBI gene;Acc:374197]
51. TBC1D1 ENSGALG00000039380 4423 0.905 - - - - - - - 0.905 - - TBC1 domain family member 1 [Source:NCBI gene;Acc:426162]
52. WDR92 ENSGALG00000008760 3934 0.901 - - - - - - - 0.901 - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
53. ZEB1 ENSGALG00000007260 9277 0.901 - - - - - - - 0.901 - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
54. VPS39 ENSGALG00000008991 4018 0.901 - - - - - - - 0.901 - - VPS39, HOPS complex subunit [Source:NCBI gene;Acc:423230]
55. ATOX1 ENSGALG00000004176 16486 0.899 - - - - - - - 0.899 - - antioxidant 1 copper chaperone [Source:NCBI gene;Acc:770231]
56. SOX9 ENSGALG00000004386 14802 0.898 - - - - - - - 0.898 - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
57. DCTN6 ENSGALG00000010298 7507 0.898 - - - - - - - 0.898 - - dynactin subunit 6 [Source:NCBI gene;Acc:771257]
58. ELP3 ENSGALG00000016624 4483 0.896 - - - - - - - 0.896 - - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
59. ARPC5L ENSGALG00000001014 5642 0.895 - - - - - - - 0.895 - - actin related protein 2/3 complex subunit 5 like [Source:HGNC Symbol;Acc:HGNC:23366]
60. BCL2L1 ENSGALG00000006211 2490 0.895 - - - - - - - 0.895 - - BCL2 like 1 [Source:NCBI gene;Acc:373954]
61. FZD6 ENSGALG00000030626 3336 0.895 - - - - - - - 0.895 - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
62. IFT81 ENSGALG00000003854 2534 0.894 - - - - - - - 0.894 - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
63. ANKRD49 ENSGALG00000017210 3247 0.893 - - - - - - - 0.893 - - ankyrin repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:25970]
64. UQCC UQCC 5913 0.892 - - - - - - - 0.892 - -
65. MED1 ENSGALG00000001708 9556 0.892 - - - - - - - 0.892 - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
66. EHD3 ENSGALG00000009086 14407 0.891 - - - - - - 0.891 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
67. DUSP3 ENSGALG00000035369 1790 0.889 - - - - - - - 0.889 - - dual specificity phosphatase 3
68. NEK1 ENSGALG00000009683 4305 0.888 - - - - - - - 0.888 - - NIMA related kinase 1 [Source:HGNC Symbol;Acc:HGNC:7744]
69. PDS5B ENSGALG00000017070 3998 0.888 - - - - - - - 0.888 - - PDS5 cohesin associated factor B [Source:NCBI gene;Acc:418910]
70. PDIA3 ENSGALG00000008348 4982 0.886 - - - - - - - 0.886 - - protein disulfide isomerase family A member 3 [Source:NCBI gene;Acc:373899]
71. FABP3 ENSGALG00000037050 873 0.886 - - - - - - - 0.886 - - fatty acid binding protein 3 [Source:NCBI gene;Acc:419557]
72. HEXA ENSGALG00000043828 4789 0.886 - - - - - - - 0.886 - - hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
73. EFNB1 ENSGALG00000036539 2706 0.885 - - - - - - - 0.885 - - ephrin B1 [Source:NCBI gene;Acc:395896]
74. STXBP3 ENSGALG00000002001 1740 0.884 - - - - - - - 0.884 - - syntaxin binding protein 3 [Source:NCBI gene;Acc:424341]
75. CHEK2 ENSGALG00000005695 1558 0.883 - - - - - - - 0.883 - - checkpoint kinase 2 [Source:NCBI gene;Acc:768913]
76. FPGS ENSGALG00000042460 1749 0.882 - - - - - - - 0.882 - - folylpolyglutamate synthase [Source:HGNC Symbol;Acc:HGNC:3824]
77. XPOT ENSGALG00000009835 2953 0.882 - - - - - - - 0.882 - - exportin for tRNA [Source:NCBI gene;Acc:417824]
78. C20ORF7 C20ORF7 2383 0.882 - - - - - - - 0.882 - -
79. PFDN2 ENSGALG00000026374 22020 0.882 - - - - - - - 0.882 - - prefoldin subunit 2 [Source:HGNC Symbol;Acc:HGNC:8867]
80. GTF2H1 ENSGALG00000042340 1553 0.881 - - - - - - - 0.881 - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
81. PIK3C2B ENSGALG00000037043 4522 0.88 - - - - - - - 0.880 - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
82. FAM69B ENSGALG00000002437 1253 0.88 - - - - - - - 0.880 - - family with sequence similarity 69 member B [Source:HGNC Symbol;Acc:HGNC:28290]
83. C12orf45 C12orf45 2445 0.879 - - - - - - - 0.879 - -
84. CHP1 ENSGALG00000008569 6876 0.879 - - - - - - - 0.879 - - calcineurin like EF-hand protein 1 [Source:NCBI gene;Acc:423211]
85. ANKS1B ENSGALG00000011549 440 0.877 - - - - - - - 0.877 - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]
86. ERICH1 ENSGALG00000031021 1495 0.877 - - - - - - - 0.877 - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
87. PDE4B ENSGALG00000011094 1871 0.877 - - - - - - - 0.877 - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
88. KIF2A ENSGALG00000014737 16391 0.876 - - - - - - - 0.876 - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
89. CRADD ENSGALG00000011297 1653 0.876 - - - - - - - 0.876 - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:NCBI gene;Acc:417900]
90. ERAL1 ENSGALG00000003995 1114 0.875 - - - - - - - 0.875 - - Era like 12S mitochondrial rRNA chaperone 1 [Source:NCBI gene;Acc:374084]
91. ADAMTSL1 1479 0.874 - - - - - - - 0.874 - - ADAMTS like 1, transcript variant X3
92. MAP9 ENSGALG00000020253 785 0.874 - - - - - - - 0.874 - - microtubule associated protein 9, transcript variant X7
93. ITGB1 ENSGALG00000007145 19551 0.873 - - - - - - 0.873 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
94. EVL ENSGALG00000011209 5440 0.869 - - - - - - 0.869 - - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
95. FAM177A1 ENSGALG00000010046 4318 0.868 - - - - - - 0.868 - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
96. YWHAH ENSGALG00000006743 29828 0.866 - - - - - - - 0.866 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta [Source:NCBI gene;Acc:416955]
97. GPC4 ENSGALG00000006080 56498 0.865 - - - - - - 0.865 - - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
98. C1QBP ENSGALG00000001654 34814 0.861 - - - - - - 0.861 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
99. SAR1B ENSGALG00000038753 6493 0.86 - - - - - - 0.860 - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
100. LIMD1 ENSGALG00000035623 7282 0.856 - - - - - - 0.856 - - - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]

There are 822 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA