Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ACTG1

Gene Name Gene ID Reads Annotation
ACTG1 ENSGALG00000001381 63905 Actin, gamma 1 [Source:NCBI gene;Acc:415296]











Genes with expression patterns similar to ACTG1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ACTG1 ENSGALG00000001381 63905 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
2. GFPT1 ENSGALG00000036391 14025 1.779 - - - - 0.828 - 0.951 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
3. SH2D3C ENSGALG00000005036 5101 1.75 - - - - 0.837 - 0.913 - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
4. STK3 ENSGALG00000032850 6339 1.73 - - - - 0.845 - 0.885 - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
5. SFSWAP ENSGALG00000002487 9977 1.638 - - - - 0.854 - 0.784 - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
6. SDOS SDOS 66125 1.503 - - - - 0.798 0.705 - - - -
7. SRSF3 ENSGALG00000000533 51281 1.492 - - 0.729 - 0.763 - - - - - serine and arginine rich splicing factor 3 [Source:NCBI gene;Acc:419815]
8. NOL9 ENSGALG00000028958 23978 0.971 - - - - - - 0.971 - - - nucleolar protein 9 [Source:HGNC Symbol;Acc:HGNC:26265]
9. GNB2L1 ENSGALG00000000122 194871 0.968 - - - - - - 0.968 - - - receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
10. PKM ENSGALG00000001992 93960 0.965 - - - - - - 0.965 - - - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
11. SRSF7 ENSGALG00000033120 43444 0.964 - - - - - - 0.964 - - - serine and arginine rich splicing factor 7 [Source:NCBI gene;Acc:426265]
12. NAA15 ENSGALG00000009782 18563 0.952 - - - - - - 0.952 - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:30782]
13. TCP1 ENSGALG00000011637 73216 0.944 - - - - 0.944 - - - - - t-complex 1 [Source:NCBI gene;Acc:421586]
14. BTG1 ENSGALG00000011276 17496 0.942 - - - - - - 0.942 - - - BTG anti-proliferation factor 1 [Source:NCBI gene;Acc:396295]
15. LPHN2 LPHN2 16507 0.941 - - - - - - 0.941 - - -
16. MTF2 ENSGALG00000043087 15225 0.937 - - - - - - 0.937 - - - metal response element binding transcription factor 2 [Source:NCBI gene;Acc:395174]
17. PCNA ENSGALG00000029292 19163 0.936 - - - - - - 0.936 - - - proliferating cell nuclear antigen [Source:NCBI gene;Acc:373984]
18. PPP1R8 ENSGALG00000000729 11797 0.936 - - - - - - 0.936 - - - protein phosphatase 1 regulatory subunit 8 [Source:NCBI gene;Acc:419564]
19. SSR1 ENSGALG00000012798 62626 0.933 - - - - - - 0.933 - - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
20. TMEM9B ENSGALG00000005908 14074 0.931 - - - - - - 0.931 - - - TMEM9 domain family member B [Source:HGNC Symbol;Acc:HGNC:1168]
21. LARS ENSGALG00000007494 13966 0.929 - - - - - - 0.929 - - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
22. STT3B ENSGALG00000011465 11939 0.929 - - - - - - 0.929 - - - STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:NCBI gene;Acc:428444]
23. EIF5B ENSGALG00000016764 30681 0.929 - - - - - - 0.929 - - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
24. FKBP9 ENSGALG00000037669 12079 0.928 - - - - - - 0.928 - - - FK506 binding protein 9 [Source:NCBI gene;Acc:395652]
25. OLFML3 ENSGALG00000001956 28633 0.928 - - - - - - 0.928 - - - olfactomedin like 3 [Source:NCBI gene;Acc:419882]
26. NSF ENSGALG00000001055 7399 0.925 - - - - - - 0.925 - - - N-ethylmaleimide sensitive factor, vesicle fusing ATPase [Source:NCBI gene;Acc:419972]
27. GAS41 GAS41 9941 0.922 - - - - - - 0.922 - - -
28. SF3A1 ENSGALG00000007937 11716 0.921 - - - - - - 0.921 - - - splicing factor 3a subunit 1 [Source:NCBI gene;Acc:427717]
29. SAMM50 ENSGALG00000014194 20437 0.92 - - - - - - 0.920 - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
30. FAM206A ENSGALG00000019524 7170 0.919 - - - - - - 0.919 - - - family with sequence similarity 206 member A [Source:NCBI gene;Acc:420983]
31. USP34 ENSGALG00000004455 6667 0.919 - - - - - - 0.919 - - - ubiquitin specific peptidase 34 [Source:NCBI gene;Acc:421193]
32. TLE4 TLE4 7278 0.919 - - - - - - 0.919 - - -
33. WDR33 ENSGALG00000002043 6340 0.918 - - - - - - 0.918 - - - WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]
34. CCDC47 ENSGALG00000000564 6584 0.918 - - - - - - 0.918 - - - coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
35. CASC4 ENSGALG00000008208 8338 0.917 - - - - - - 0.917 - - - cancer susceptibility 4 [Source:NCBI gene;Acc:415575]
36. BID ENSGALG00000013039 12427 0.915 - - - - - - 0.915 - - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
37. EIF5A2 ENSGALG00000009309 143671 0.913 - - - - - - 0.913 - - - eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
38. PPP1CB ENSGALG00000010026 6909 0.912 - - - - - - 0.912 - - - protein phosphatase 1 catalytic subunit beta [Source:NCBI gene;Acc:396019]
39. SLC9A3R2 ENSGALG00000005608 4220 0.91 - - - - - - 0.910 - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
40. FANCC ENSGALG00000012618 7002 0.909 - - - - - - 0.909 - - - FA complementation group C [Source:NCBI gene;Acc:427468]
41. VPS41 ENSGALG00000031635 4391 0.909 - - - - - - 0.909 - - - VPS41, HOPS complex subunit [Source:NCBI gene;Acc:420762]
42. POGZ ENSGALG00000036365 4056 0.909 - - - - - - 0.909 - - - pogo transposable element with ZNF domain, transcript variant X2
43. ZCCHC17 ENSGALG00000000618 5163 0.908 - - - - - - 0.908 - - - zinc finger CCHC-type containing 17 [Source:NCBI gene;Acc:404295]
44. TRIM37 ENSGALG00000005084 4036 0.907 - - - - - - 0.907 - - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
45. SYNCRIP ENSGALG00000015830 30555 0.907 - - - - - - 0.907 - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
46. GTF2I ENSGALG00000021665 6812 0.907 - - - - - - 0.907 - - - general transcription factor IIi [Source:HGNC Symbol;Acc:HGNC:4659]
47. HOXB3 ENSGALG00000043219 5198 0.907 - - - - - - 0.907 - - - homeobox B3 [Source:NCBI gene;Acc:395502]
48. RARRES2 ENSGALG00000042642 3043 0.905 - - - - - - 0.905 - - - retinoic acid receptor responder (tazarotene induced) 2 [Source:NCBI gene;Acc:420366]
49. C-MET C-MET 1650 0.902 - - - - - - 0.902 - - -
50. FAAH ENSGALG00000010433 3309 0.901 - - - - - - 0.901 - - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
51. HNRNPAB ENSGALG00000014381 41009 0.873 - - - - 0.873 - - - - - heterogeneous nuclear ribonucleoprotein A/B [Source:NCBI gene;Acc:396268]
52. PUM1 ENSGALG00000042598 9392 0.867 - - - - 0.867 - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
53. NFASC ENSGALG00000031776 4264 0.866 - - - - 0.866 - - - - - neurofascin [Source:NCBI gene;Acc:419824]
54. PSPC1 ENSGALG00000017142 13036 0.866 - - - - 0.866 - - - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
55. TRAPPC12 ENSGALG00000016387 2593 0.864 - - - - 0.864 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
56. COMMD8 ENSGALG00000026279 13509 0.863 - - - - 0.863 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
57. NAP1L1 ENSGALG00000010238 14506 0.862 - - - - 0.862 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
58. MRPL23 ENSGALG00000006561 13737 0.862 - - - - 0.862 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
59. TLCD1 ENSGALG00000003973 17569 0.861 - - - - 0.861 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
60. ATG5 ENSGALG00000015387 7752 0.861 - - - - 0.861 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
61. ZBTB10 ENSGALG00000034376 3271 0.86 - - - - 0.860 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
62. CBWD1 ENSGALG00000010147 2765 0.859 - - - - 0.859 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
63. IGBP1 ENSGALG00000044628 9200 0.859 - - - - 0.859 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
64. TK2 ENSGALG00000034216 5394 0.859 - - - - 0.859 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
65. LATS2 4776 0.858 - - - - 0.858 - - - - - large tumor suppressor kinase 2
66. COIL ENSGALG00000003158 7806 0.858 - - - - 0.858 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
67. EAPP ENSGALG00000010007 5080 0.857 - - - - 0.857 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
68. SHROOM2 ENSGALG00000030802 4517 0.857 - - - - 0.857 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
69. WDR82 ENSGALG00000025904 4783 0.857 - - - - 0.857 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
70. ELL2 ENSGALG00000014678 1111 0.857 - - - - 0.857 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
71. REEP5 ENSGALG00000023157 6282 0.856 - - - - 0.856 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
72. IGF1R ENSGALG00000040651 772 0.856 - - - - 0.856 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
73. CSNK1G1 ENSGALG00000030812 31618 0.856 - - - - 0.856 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
74. DRAXIN ENSGALG00000004631 3122 0.856 - - - - 0.856 - - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
75. SSPN ENSGALG00000014042 638 0.855 - - - - 0.855 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
76. MRPS27 ENSGALG00000015002 6541 0.855 - - - - 0.855 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
77. XPO7 ENSGALG00000001838 1875 0.855 - - - - 0.855 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
78. CTSZ ENSGALG00000007462 630 0.855 - - - - 0.855 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
79. ENSGALG00000011687 ENSGALG00000011687 4553 0.854 - - - - 0.854 - - - - -
80. KNOP1 ENSGALG00000002042 6251 0.854 - - - - 0.854 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
81. DNAJC12 ENSGALG00000002769 1418 0.854 - - - - 0.854 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
82. TLK2 ENSGALG00000000410 4690 0.853 - - - - 0.853 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
83. DDX55 ENSGALG00000003298 2315 0.853 - - - - 0.853 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
84. REST 2394 0.853 - - - - 0.853 - - - - - RE1 silencing transcription factor
85. CZH9ORF41 CZH9ORF41 3492 0.853 - - - - 0.853 - - - - -
86. YY1 ENSGALG00000017388 1933 0.853 - - - - 0.853 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
87. FERMT2 ENSGALG00000012425 5480 0.853 - - - - 0.853 - - - - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
88. PCBP4 ENSGALG00000027695 7937 0.852 - - - - 0.852 - - - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
89. SSR2 ENSGALG00000000764 32190 0.852 - - - - 0.852 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
90. TCP11L1 ENSGALG00000011688 2427 0.852 - - - - 0.852 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
91. MRPS25 ENSGALG00000008506 12131 0.852 - - - - 0.852 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
92. POLR2B ENSGALG00000011387 4864 0.852 - - - - 0.852 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
93. SIRT1 ENSGALG00000002761 9028 0.851 - - - - 0.851 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
94. MKI67 ENSGALG00000025996 28136 0.851 - - - - 0.851 - - - - - marker of proliferation Ki-67, transcript variant X3
95. FH ENSGALG00000013165 13669 0.851 - - - - 0.851 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
96. IGDCC4 ENSGALG00000007410 5457 0.851 - - - - 0.851 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
97. BAG4 ENSGALG00000003254 5751 0.851 - - - - 0.851 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
98. CDC42SE2 ENSGALG00000027258 4725 0.85 - - - - 0.850 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
99. GPN3 ENSGALG00000003807 6320 0.849 - - - - 0.849 - - - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
100. LARP1 ENSGALG00000040109 14808 0.849 - - - - 0.849 - - - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]

There are 70 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA