Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ACTC1

Gene Name Gene ID Reads Annotation
ACTC1 ENSGALG00000009844 20914 actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]











Genes with expression patterns similar to ACTC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ACTC1 ENSGALG00000009844 20914 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
2. TNNI1 ENSGALG00000000313 4069 6.767 0.895 0.904 0.864 0.739 0.804 0.897 - - 0.854 0.810 troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
3. TNNC2 ENSGALG00000006835 2963 6.594 0.719 0.928 0.928 0.813 0.809 0.822 - - 0.866 0.709 troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
4. KLHL31 ENSGALG00000016309 1518 6.187 0.886 0.754 0.848 0.732 0.715 0.724 0.753 - 0.775 - kelch like family member 31 [Source:HGNC Symbol;Acc:HGNC:21353]
5. gga-mir-7474 ENSGALG00000033766 5727 6.149 0.940 - 0.887 0.926 0.894 - 0.875 - 0.771 0.856 gga-mir-7474 [Source:miRBase;Acc:MI0024147]
6. TPM1 ENSGALG00000003521 11894 5.813 0.851 - 0.825 0.886 0.877 - 0.774 - 0.817 0.783 tropomyosin 1 (alpha) [Source:NCBI gene;Acc:396366]
7. XIRP1 ENSGALG00000006025 729 5.551 0.823 - 0.761 0.845 0.771 - 0.874 - 0.747 0.730 xin actin binding repeat containing 1 [Source:NCBI gene;Acc:374266]
8. TNNT3 ENSGALG00000006572 1652 5.078 - 0.886 0.940 0.911 0.772 - - - 0.706 0.863 troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
9. RBM24 ENSGALG00000012712 4138 4.988 0.942 0.748 0.854 - 0.799 0.887 - - - 0.758 RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
10. BHMT ENSGALG00000004518 4700 4.655 - 0.756 0.774 0.702 - 0.804 0.809 - - 0.810 betaine--homocysteine S-methyltransferase
11. MYOZ2 ENSGALG00000011991 714 4.602 0.828 0.744 0.717 - 0.774 - - - 0.793 0.746 myozenin 2 [Source:NCBI gene;Acc:422682]
12. TRIM55 ENSGALG00000041327 1097 4.236 0.958 0.762 0.900 - - - - - 0.849 0.767 tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
13. MYL1 ENSGALG00000002907 1300 4.21 0.775 - 0.870 0.860 0.867 - - - 0.838 - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
14. MYL2_1 ENSGALG00000004582 2367 4.164 - 0.833 0.889 0.715 0.813 - - - 0.914 - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
15. MYH15 ENSGALG00000015358 6304 4.072 0.900 - - 0.825 0.776 - - - 0.802 0.769 myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
16. EN1 ENSGALG00000042389 3051 4.008 - - 0.847 0.848 0.801 0.796 - - 0.716 - engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
17. MYF6 ENSGALG00000010936 1143 3.941 - 0.806 0.744 - - 0.836 0.734 - 0.821 - myogenic factor 6 [Source:NCBI gene;Acc:417873]
18. HSPB8 ENSGALG00000007383 5333 3.803 - - 0.819 0.802 0.721 0.702 0.759 - - - heat shock protein family B (small) member 8 [Source:HGNC Symbol;Acc:HGNC:30171]
19. ACTA1 ENSGALG00000011086 2543 3.376 0.869 - 0.882 0.852 0.773 - - - - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
20. ACTN2 ENSGALG00000014463 1724 3.372 0.943 - 0.842 - - - - - 0.807 0.780 actinin alpha 2 [Source:NCBI gene;Acc:396263]
21. MYL3 ENSGALG00000005448 3379 3.344 0.951 0.753 0.890 - - - - - 0.750 - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
22. C1QTNF3 ENSGALG00000027887 8646 3.33 - - 0.893 0.865 0.828 - - - - 0.744 C1q and tumor necrosis factor related protein 3, transcript variant X1
23. UNC45B ENSGALG00000002186 399 3.266 0.874 - 0.725 - - 0.939 - - 0.728 - unc-45 myosin chaperone B [Source:HGNC Symbol;Acc:HGNC:14304]
24. SH3BGR ENSGALG00000016127 2561 3.236 0.876 - 0.802 0.832 - - - - - 0.726 SH3 domain binding glutamate rich protein
25. GGMOXR1 GGMOXR1 6734 3.177 - - 0.789 0.787 0.821 - 0.780 - - -
26. PKD2L2 ENSGALG00000006120 592 3.16 - - 0.784 0.803 0.807 - - - - 0.766 polycystin 2 like 2, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9012]
27. NEXN ENSGALG00000008945 1504 3.137 0.708 - 0.878 0.787 - - - - - 0.764 nexilin F-actin binding protein [Source:HGNC Symbol;Acc:HGNC:29557]
28. PAX1 ENSGALG00000039040 3339 3.061 - - 0.712 0.772 0.745 - - - - 0.832 paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
29. MYOD1 ENSGALG00000006216 568 2.502 - - - - - 0.936 - - 0.767 0.799 myogenic differentiation 1 [Source:NCBI gene;Acc:374048]
30. MYF5 ENSGALG00000028091 1965 2.455 - 0.842 0.876 - - 0.737 - - - - myogenic factor 5 [Source:NCBI gene;Acc:395633]
31. TMEM182 ENSGALG00000038936 274 2.4 - - 0.877 0.811 0.712 - - - - - transmembrane protein 182 [Source:HGNC Symbol;Acc:HGNC:26391]
32. TNNT2 ENSGALG00000000302 568 2.397 0.884 - 0.721 0.792 - - - - - - troponin T2, cardiac type [Source:NCBI gene;Acc:396433]
33. SMOC1 ENSGALG00000009415 2403 2.374 - - 0.787 - - - - - 0.742 0.845 SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
34. MYOG ENSGALG00000000172 460 2.367 - - 0.823 - - 0.737 0.807 - - - myogenin [Source:NCBI gene;Acc:374004]
35. RGMA ENSGALG00000039173 12874 2.354 - - 0.703 0.814 - - 0.837 - - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
36. NGFR ENSGALG00000035950 13452 2.339 - 0.747 0.819 0.773 - - - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
37. TCF15 ENSGALG00000026276 3646 2.32 - - 0.828 0.785 - - 0.707 - - - transcription factor 15 [Source:NCBI gene;Acc:395788]
38. TNNI2 ENSGALG00000006591 690 2.294 - 0.758 0.825 - 0.711 - - - - - troponin I2, fast skeletal type [Source:NCBI gene;Acc:396386]
39. AHCY ENSGALG00000033677 35555 2.267 - - 0.774 0.783 - - - - - 0.710 adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
40. TITIN TITIN 589 2.256 0.710 - - 0.816 - - - - 0.730 -
41. ENSGALG00000028654 ENSGALG00000028654 236 2.244 - - 0.768 0.750 - - - - 0.726 -
42. CRIP1 ENSGALG00000002771 4270 2.22 - 0.724 0.782 0.714 - - - - - - cysteine rich protein 1 [Source:NCBI gene;Acc:101747696]
43. SOX9 ENSGALG00000004386 14802 2.219 - - - 0.797 0.714 - - - 0.708 - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
44. MEOX2 ENSGALG00000010794 1556 2.2 - - 0.755 0.713 0.732 - - - - - mesenchyme homeobox 2 [Source:NCBI gene;Acc:374137]
45. ENSGALG00000010113 ENSGALG00000010113 508 2.192 - - 0.739 0.747 - - - - - 0.706
46. TNNC1 ENSGALG00000001459 7110 1.699 0.952 - - - 0.747 - - - - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
47. CCDC141 ENSGALG00000020788 606 1.676 0.877 - - - - - - - - 0.799 coiled-coil domain containing 141, transcript variant X5
48. HSPB2 ENSGALG00000040842 197 1.648 0.875 - - - - - - - 0.773 - heat shock protein family B (small) member 2 [Source:NCBI gene;Acc:414136]
49. MYBPC1 ENSGALG00000012783 317 1.642 - - 0.883 0.759 - - - - - - myosin binding protein C, slow type [Source:HGNC Symbol;Acc:HGNC:7549]
50. AMPD1 ENSGALG00000002082 228 1.616 - - 0.827 - - - - - 0.789 - adenosine monophosphate deaminase 1 [Source:HGNC Symbol;Acc:HGNC:468]
51. CPZ ENSGALG00000030209 8822 1.61 - - - 0.865 - - - - - 0.745 carboxypeptidase Z [Source:NCBI gene;Acc:395266]
52. MYH1D ENSGALG00000027323 365 1.579 0.746 - 0.833 - - - - - - - Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
53. GJD2 ENSGALG00000009845 236 1.562 - - 0.840 - - - - - - 0.722 gap junction protein delta 2 [Source:NCBI gene;Acc:395273]
54. TMEM47 ENSGALG00000027198 3619 1.539 - - 0.782 - - - - - 0.757 - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
55. KERA ENSGALG00000011270 4204 1.528 - - - - - - 0.703 - - 0.825 keratocan [Source:NCBI gene;Acc:373995]
56. GFRA2 ENSGALG00000032856 1314 1.489 - - 0.777 - - - 0.712 - - - GDNF family receptor alpha 2 [Source:NCBI gene;Acc:395993]
57. MYL4 ENSGALG00000000585 16982 1.487 0.709 - 0.778 - - - - - - - myosin, light chain 4, alkali; atrial, embryonic [Source:NCBI gene;Acc:396472]
58. PTCH1 ENSGALG00000012620 4840 1.481 - - - 0.705 - - 0.776 - - - patched 1 [Source:NCBI gene;Acc:395806]
59. SSPN ENSGALG00000014042 638 1.467 0.703 - 0.764 - - - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
60. P4HA3 ENSGALG00000042030 826 1.461 - 0.738 - - - - - - - 0.723 prolyl 4-hydroxylase subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:30135]
61. SPON1 ENSGALG00000038775 16503 1.46 - - 0.757 - 0.703 - - - - - spondin 1 [Source:NCBI gene;Acc:395657]
62. CYP1B1 ENSGALG00000025822 3143 1.45 - - - - - - - - 0.702 0.748 cytochrome P450 family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2597]
63. NTN3 ENSGALG00000029072 1368 1.436 - - - 0.721 - - - - - 0.715 netrin 1 [Source:NCBI gene;Acc:396387]
64. LECT1 LECT1 12694 1.407 - - - - 0.705 - - - - 0.702
65. MYL2 ENSGALG00000004582 2245 0.951 0.951 - - - - - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
66. HSPB7L ENSGALG00000028183 795 0.942 0.942 - - - - - - - - - heat shock protein beta-7-like
67. MYBPC3 ENSGALG00000008148 315 0.934 0.934 - - - - - - - - - myosin binding protein C, cardiac [Source:NCBI gene;Acc:396013]
68. CELF5 ENSGALG00000026716 2 0.93 - - - - - 0.930 - - - - CUGBP Elav-like family member 5 [Source:HGNC Symbol;Acc:HGNC:14058]
69. TPM4 ENSGALG00000002563 15621 0.917 0.917 - - - - - - - - - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
70. EF1A EF1A 2378 0.913 0.913 - - - - - - - - -
71. CD109 ENSGALG00000015910 11 0.905 - - - - - 0.905 - - - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
72. CSRP3 ENSGALG00000004044 456 0.902 0.902 - - - - - - - - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
73. LASP-2 LASP-2 4415 0.897 0.897 - - - - - - - - -
74. TECRL ENSGALG00000038771 126 0.887 0.887 - - - - - - - - - trans-2,3-enoyl-CoA reductase like [Source:HGNC Symbol;Acc:HGNC:27365]
75. MYH7B ENSGALG00000030985 199 0.88 0.880 - - - - - - - - - Gallus gallus myosin, heavy chain 7B, cardiac muscle, beta (MYH7B), mRNA. [Source:RefSeq mRNA;Acc:NM_204587]
76. ADPRHL1 ENSGALG00000016826 133 0.875 0.875 - - - - - - - - - ADP-ribosylhydrolase like 1 [Source:HGNC Symbol;Acc:HGNC:21303]
77. VCAM1 ENSGALG00000005257 102 0.874 0.874 - - - - - - - - - vascular cell adhesion molecule 1, transcript variant X1
78. POPDC2 ENSGALG00000014988 281 0.873 0.873 - - - - - - - - - popeye domain containing 2 [Source:NCBI gene;Acc:404229]
79. ACBD7 ENSGALG00000019663 2328 0.858 - - 0.858 - - - - - - - acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
80. BVES ENSGALG00000015410 435 0.85 0.850 - - - - - - - - - blood vessel epicardial substance [Source:NCBI gene;Acc:408032]
81. PPAPDC1A PPAPDC1A 2790 0.849 - - - 0.849 - - - - - -
82. gga-mir-3526 ENSGALG00000029121 41375 0.849 0.849 - - - - - - - - - gga-mir-3526 [Source:miRBase;Acc:MI0015377]
83. ITGB1BP2 ENSGALG00000005493 628 0.848 0.848 - - - - - - - - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
84. CTNNA3 ENSGALG00000002845 127 0.845 0.845 - - - - - - - - - catenin alpha 3 [Source:NCBI gene;Acc:423648]
85. GABRP ENSGALG00000002152 17 0.843 - - - - - - - 0.843 - - gamma-aminobutyric acid type A receptor pi subunit [Source:HGNC Symbol;Acc:HGNC:4089]
86. JSC JSC 7982 0.843 - - - - - - - - - 0.843
87. CRYBA4 ENSGALG00000005634 56 0.843 - - - - - - - 0.843 - - crystallin beta A4 [Source:NCBI gene;Acc:373998]
88. AOX1 ENSGALG00000008185 14 0.843 - - - - - - - 0.843 - - aldehyde oxidase 1 [Source:NCBI gene;Acc:424071]
89. SPAG17 55 0.843 - - - - - - - 0.843 - - sperm associated antigen 17
90. AKR1D1 ENSGALG00000012834 15183 0.84 - - 0.840 - - - - - - - aldo-keto reductase family 1 member D1 [Source:NCBI gene;Acc:418107]
91. ANG-1 ANG-1 5239 0.839 0.839 - - - - - - - - -
92. MAST3 ENSGALG00000003499 21 0.836 - - - - - - - 0.836 - - microtubule associated serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:19036]
93. DSE ENSGALG00000014963 70 0.836 - - - - - - - 0.836 - - dermatan sulfate epimerase, transcript variant X1
94. SIX4 ENSGALG00000017389 10 0.836 - - - - - - - 0.836 - - SIX homeobox 4 [Source:HGNC Symbol;Acc:HGNC:10890]
95. AKAP12 ENSGALG00000036240 64617 0.817 - - - - - - - - - 0.817 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
96. PLN ENSGALG00000027583 419 0.816 0.816 - - - - - - - - - phospholamban [Source:NCBI gene;Acc:396378]
97. BRT-1 BRT-1 26083 0.816 - - - - 0.816 - - - - -
98. LBH ENSGALG00000009052 5545 0.812 0.812 - - - - - - - - - limb bud and heart development [Source:NCBI gene;Acc:421301]
99. LGR5 ENSGALG00000010163 2931 0.808 - - - - - - - - - 0.808 leucine rich repeat containing G protein-coupled receptor 5 [Source:HGNC Symbol;Acc:HGNC:4504]
100. NKX2-5 ENSGALG00000002886 81 0.807 0.807 - - - - - - - - - NK2 homeobox 5 [Source:NCBI gene;Acc:396073]

There are 139 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA