Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ACSF3

Gene Name Gene ID Reads Annotation
ACSF3 ENSGALG00000035225 261 acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]











Genes with expression patterns similar to ACSF3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ACSF3 ENSGALG00000035225 261 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]
2. PRKCE ENSGALG00000010000 99 1.749 - - 0.926 - - - 0.823 - - - protein kinase C epsilon, transcript variant X1
3. PHTF2 ENSGALG00000008335 722 1.722 - - 0.950 - - - 0.772 - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
4. C1H11ORF70 ENSGALG00000017189 395 1.655 - - 0.867 - - - - - - 0.788 chromosome 1 open reading frame, human C11orf70 [Source:NCBI gene;Acc:418985]
5. NUDT4 ENSGALG00000011285 2998 1.624 - - 0.917 - - - - - - 0.707 nudix hydrolase 4, transcript variant X5
6. ZNF800 ENSGALG00000033997 415 1.594 - - 0.783 - - - - - - 0.811 zinc finger protein 800 [Source:NCBI gene;Acc:417747]
7. VTI1B ENSGALG00000009526 133 1.58 - - 0.827 - - - 0.753 - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
8. TSPAN14 ENSGALG00000002414 69 1.558 - - 0.818 - - - 0.740 - - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
9. DNALI1 ENSGALG00000001996 64 0.971 - - 0.971 - - - - - - - dynein axonemal light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:14353]
10. ATXN3 ENSGALG00000010766 48 0.97 - - 0.970 - - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
11. EML5 ENSGALG00000010639 25 0.97 - - 0.970 - - - - - - - echinoderm microtubule associated protein like 5, transcript variant X1
12. AHR2 ENSGALG00000023742 21 0.969 - - 0.969 - - - - - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
13. TOX3 ENSGALG00000034649 54 0.968 - - 0.968 - - - - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
14. C15orf60 C15orf60 16 0.967 - - 0.967 - - - - - - -
15. KPNA5 ENSGALG00000014937 28 0.965 - - 0.965 - - - - - - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
16. GALNT11 ENSGALG00000006233 210 0.959 - - 0.959 - - - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
17. PRC1 ENSGALG00000012836 20 0.958 - - 0.958 - - - - - - - protein regulator of cytokinesis 1 [Source:NCBI gene;Acc:770336]
18. LLGL1 ENSGALG00000014408 15 0.957 - - 0.957 - - - - - - - LLGL1, scribble cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:6628]
19. FSCN2 ENSGALG00000023354 13 0.956 - - 0.956 - - - - - - - fascin actin-bundling protein 2, retinal [Source:NCBI gene;Acc:429198]
20. EPHA1 ENSGALG00000014687 174 0.954 - - 0.954 - - - - - - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
21. FAM161A ENSGALG00000008810 36 0.954 - - - - - - - - - 0.954 FAM161A, centrosomal protein [Source:HGNC Symbol;Acc:HGNC:25808]
22. PDZK1IP1 ENSGALG00000010473 551 0.953 - - 0.953 - - - - - - - PDZK1 interacting protein 1 [Source:NCBI gene;Acc:424619]
23. ENSGALG00000028778 ENSGALG00000028778 47 0.952 - - 0.952 - - - - - - -
24. ENSGALG00000005723 ENSGALG00000005723 36 0.952 - - 0.952 - - - - - - -
25. RAB11FIP1 41 0.949 - - 0.949 - - - - - - - RAB11 family interacting protein 1, transcript variant X2
26. OTOA ENSGALG00000007070 94 0.949 - - 0.949 - - - - - - - otoancorin [Source:HGNC Symbol;Acc:HGNC:16378]
27. CD300A CD300A 173 0.948 - - 0.948 - - - - - - -
28. CREB3 ENSGALG00000002523 23 0.948 - - 0.948 - - - - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
29. FAM3B ENSGALG00000016140 111 0.948 - - 0.948 - - - - - - - family with sequence similarity 3 member B [Source:HGNC Symbol;Acc:HGNC:1253]
30. DFFB ENSGALG00000036295 88 0.946 - - 0.946 - - - - - - - DNA fragmentation factor subunit beta [Source:NCBI gene;Acc:374158]
31. FAM199X ENSGALG00000008872 44 0.944 - - 0.944 - - - - - - - family with sequence similarity 199, X-linked [Source:HGNC Symbol;Acc:HGNC:25195]
32. ZZEF1 ENSGALG00000001546 767 0.942 - - 0.942 - - - - - - - zinc finger ZZ-type and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29027]
33. BMP2K ENSGALG00000010885 37 0.936 - - 0.936 - - - - - - - BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
34. PKD2 ENSGALG00000010921 55 0.935 - - 0.935 - - - - - - - polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
35. CNKSR1 ENSGALG00000046299 195 0.935 - - 0.935 - - - - - - - connector enhancer of kinase suppressor of Ras 1 [Source:HGNC Symbol;Acc:HGNC:19700]
36. KIDINS220 ENSGALG00000016409 854 0.933 - - 0.933 - - - - - - - kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
37. DLX6 ENSGALG00000023195 29 0.933 - - 0.933 - - - - - - - distal-less homeobox 6 [Source:NCBI gene;Acc:772070]
38. RIPK4 ENSGALG00000040189 102 0.932 - - 0.932 - - - - - - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
39. SIAT7E SIAT7E 13 0.93 - - - - - - - - - 0.930
40. SCN5A ENSGALG00000006112 137 0.928 - - 0.928 - - - - - - - Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
41. SCNM1 ENSGALG00000046607 665 0.925 - - 0.925 - - - - - - - sodium channel modifier 1 [Source:HGNC Symbol;Acc:HGNC:23136]
42. gga-mir-6561 ENSGALG00000026650 135 0.923 - - 0.923 - - - - - - - gga-mir-6561 [Source:miRBase;Acc:MI0022379]
43. ALKBH8 ENSGALG00000017170 699 0.921 - - 0.921 - - - - - - - alkB homolog 8, tRNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:25189]
44. DIXDC1 ENSGALG00000007929 67 0.921 - - 0.921 - - - - - - - DIX domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23695]
45. SEC22C ENSGALG00000005268 1151 0.92 - - 0.920 - - - - - - - SEC22 homolog C, vesicle trafficking protein [Source:HGNC Symbol;Acc:HGNC:16828]
46. GABRA1 ENSGALG00000001698 120 0.919 - - 0.919 - - - - - - - gamma-aminobutyric acid type A receptor alpha1 subunit [Source:NCBI gene;Acc:374214]
47. TBC1D8B ENSGALG00000009040 75 0.918 - - 0.918 - - - - - - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
48. DVL3 ENSGALG00000008414 38 0.915 - - 0.915 - - - - - - - dishevelled segment polarity protein 3 [Source:HGNC Symbol;Acc:HGNC:3087]
49. ENSGALG00000026925 ENSGALG00000026925 119 0.914 - - 0.914 - - - - - - -
50. FANCB ENSGALG00000016569 1193 0.912 - - 0.912 - - - - - - - FA complementation group B [Source:NCBI gene;Acc:418628]
51. SCL SCL 69 0.912 - - - - - - - - - 0.912
52. MIS12 ENSGALG00000001632 372 0.912 - - 0.912 - - - - - - - MIS12, kinetochore complex component [Source:NCBI gene;Acc:693254]
53. TMEM132B ENSGALG00000002742 122 0.909 - - 0.909 - - - - - - - transmembrane protein 132B [Source:HGNC Symbol;Acc:HGNC:29397]
54. ENSGALG00000004127 ENSGALG00000004127 566 0.908 - - 0.908 - - - - - - -
55. PLXNB2 ENSGALG00000039861 338 0.908 - - 0.908 - - - - - - - plexin B2 [Source:HGNC Symbol;Acc:HGNC:9104]
56. HERPUD1 ENSGALG00000001220 18 0.904 - - - - - - - - - 0.904 homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
57. TPCN2 ENSGALG00000007550 10 0.904 - - - - - - - - - 0.904 two pore segment channel 2 [Source:HGNC Symbol;Acc:HGNC:20820]
58. PAG1 ENSGALG00000034188 9 0.904 - - - - - - - - - 0.904 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:HGNC Symbol;Acc:HGNC:30043]
59. PIP5K1C ENSGALG00000000784 492 0.904 - - 0.904 - - - - - - - Gallus gallus phosphatidylinositol-4-phosphate 5-kinase, type I, gamma (PIP5K1C), mRNA. [Source:RefSeq mRNA;Acc:NM_001319021]
60. LANCL3 ENSGALG00000016265 9 0.903 - - - - - - - - - 0.903 LanC like 3 [Source:HGNC Symbol;Acc:HGNC:24767]
61. FMN2 ENSGALG00000031427 77 0.902 - - 0.902 - - - - - - - formin 2 [Source:HGNC Symbol;Acc:HGNC:14074]
62. EHD4 ENSGALG00000008950 22 0.901 - - - - - - - - - 0.901 EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
63. IPMK ENSGALG00000002710 40 0.899 - - - - - - - - - 0.899 inositol polyphosphate multikinase [Source:HGNC Symbol;Acc:HGNC:20739]
64. PRDM10 632 0.899 - - 0.899 - - - - - - - PR domain 10, transcript variant X10
65. FANCA ENSGALG00000000516 250 0.899 - - - - - - - - - 0.899 Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
66. LPGAT1 ENSGALG00000009848 33 0.898 - - - - - - - - - 0.898 lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
67. STXBP1 ENSGALG00000040003 157 0.898 - - 0.898 - - - - - - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
68. GAA ENSGALG00000038853 158 0.897 - - - - - - - - - 0.897 glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
69. CCDC135 CCDC135 220 0.896 - - 0.896 - - - - - - -
70. CCP110 ENSGALG00000006925 59 0.896 - - - - - - - - - 0.896 centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
71. S1PR1 ENSGALG00000005208 12 0.896 - - - - - - - - - 0.896 sphingosine-1-phosphate receptor 1 [Source:HGNC Symbol;Acc:HGNC:3165]
72. LONRF2 ENSGALG00000016768 193 0.896 - - - - - - - - - 0.896 LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
73. FAM160A2 ENSGALG00000003416 23 0.896 - - - - - - - - - 0.896 family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
74. ENSGALG00000011942 ENSGALG00000011942 175 0.895 - - 0.895 - - - - - - -
75. RAD54L2 ENSGALG00000003243 187 0.895 - - - - - - - - - 0.895 RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
76. AKAP10 ENSGALG00000004679 103 0.891 - - - - - - - - - 0.891 A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
77. MKL2 186 0.89 - - - - - - 0.890 - - - MKL1/myocardin like 2, transcript variant X4
78. VWDE ENSGALG00000042443 160 0.89 - - 0.890 - - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
79. XYLT1 ENSGALG00000006757 169 0.889 - - - - - - - - - 0.889 xylosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15516]
80. ZC4H2 ENSGALG00000042725 361 0.889 - - 0.889 - - - - - - - zinc finger C4H2-type containing, transcript variant X4
81. WDR63 ENSGALG00000008696 15 0.889 - - - - - - - - - 0.889 WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
82. CSMD3 ENSGALG00000031578 23 0.889 - - - - - - - - - 0.889 CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:HGNC:19291]
83. CNP1 ENSGALG00000028638 56 0.887 - - 0.887 - - - - - - - C-type natriuretic peptide 1 [Source:NCBI gene;Acc:100499455]
84. SP2 ENSGALG00000000233 43 0.887 - - - - - - - - - 0.887 Sp2 transcription factor [Source:HGNC Symbol;Acc:HGNC:11207]
85. SCAF4 ENSGALG00000033965 2027 0.887 - - - - - - - - - 0.887 SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
86. FER1L6 ENSGALG00000033783 196 0.886 - - - - - - - - - 0.886 fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
87. ENSGALG00000009344 ENSGALG00000009344 330 0.885 - - - - - - - - - 0.885
88. JAG1 ENSGALG00000009020 25 0.884 - - - - - - - - - 0.884 jagged 1 [Source:HGNC Symbol;Acc:HGNC:6188]
89. PLEKHA1 ENSGALG00000034548 34 0.883 - - - - - - - - - 0.883 pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
90. NHLRC2 ENSGALG00000008946 387 0.882 - - 0.882 - - - - - - - NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
91. EPC1 ENSGALG00000007169 101 0.882 - - - - - - - - - 0.882 enhancer of polycomb homolog 1 [Source:HGNC Symbol;Acc:HGNC:19876]
92. CSRP3 ENSGALG00000004044 456 0.88 - - - - - - - - - 0.880 cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
93. APH1A ENSGALG00000045163 146 0.88 - - 0.880 - - - - - - - aph-1 homolog A, gamma-secretase subunit [Source:HGNC Symbol;Acc:HGNC:29509]
94. SORCS1 ENSGALG00000008465 468 0.879 - - - - - - - - - 0.879 sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
95. MRVI1 ENSGALG00000005632 450 0.879 - - - - - - - - - 0.879 murine retrovirus integration site 1 homolog [Source:HGNC Symbol;Acc:HGNC:7237]
96. PDK1 ENSGALG00000013235 238 0.878 - - - - - - - - - 0.878 pyruvate dehydrogenase kinase 1 [Source:NCBI gene;Acc:425972]
97. RFX3 ENSGALG00000010179 305 0.878 - - - - - - - - - 0.878 regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
98. FAM46A ENSGALG00000035903 891 0.877 - - 0.877 - - - - - - - family with sequence similarity 46 member A [Source:NCBI gene;Acc:421845]
99. CSMD2 ENSGALG00000030229 716 0.875 - - - - - - - - - 0.875 CUB and Sushi multiple domains 2 [Source:HGNC Symbol;Acc:HGNC:19290]
100. PRTFDC1 ENSGALG00000007694 111 0.873 - - - - - - - - - 0.873 phosphoribosyl transferase domain containing 1 [Source:NCBI gene;Acc:420499]

There are 406 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA