Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ACER3

Gene Name Gene ID Reads Annotation
ACER3 ENSGALG00000000755 5761 alkaline ceramidase 3 [Source:HGNC Symbol;Acc:HGNC:16066]











Genes with expression patterns similar to ACER3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ACER3 ENSGALG00000000755 5761 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 alkaline ceramidase 3 [Source:HGNC Symbol;Acc:HGNC:16066]
2. HOXA5 ENSGALG00000025929 6231 1.572 - - - - - - 0.781 0.791 - - homeobox A5 [Source:NCBI gene;Acc:100858404]
3. TAF13 ENSGALG00000015185 11410 1.468 - - - - - - - 0.761 - 0.707 TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
4. TM4SF18 4553 1.466 - - - - - - 0.741 0.725 - - transmembrane 4 L six family member 18, transcript variant X2
5. DYNC1I2 ENSGALG00000009551 5420 1.439 - - - - - - 0.706 0.733 - - dynein cytoplasmic 1 intermediate chain 2 [Source:NCBI gene;Acc:424151]
6. MRPL47 ENSGALG00000013759 9044 1.426 - - - - - - 0.712 0.714 - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
7. COBRA1 COBRA1 4600 1.417 - - - - - - 0.715 0.702 - -
8. PABPC1 ENSGALG00000030280 23934 0.844 - - - - - - 0.844 - - - poly(A) binding protein cytoplasmic 1 [Source:NCBI gene;Acc:430997]
9. KCTD6 ENSGALG00000007111 3557 0.835 - - - - - - 0.835 - - - potassium channel tetramerization domain containing 6 [Source:HGNC Symbol;Acc:HGNC:22235]
10. TPR ENSGALG00000005105 2924 0.822 - - - - - - - 0.822 - - translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
11. TET1 ENSGALG00000031604 13002 0.822 - - - - - - 0.822 - - - tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
12. UTP6 ENSGALG00000003260 4909 0.812 - - - - - - 0.812 - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
13. ITGB1 ENSGALG00000007145 19551 0.811 - - - - - - 0.811 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
14. UTP11L UTP11L 11927 0.81 - - - - - - 0.810 - - -
15. CUL2 ENSGALG00000007095 9493 0.809 - - - - - - 0.809 - - - cullin 2 [Source:NCBI gene;Acc:420467]
16. PHF20 ENSGALG00000001522 5618 0.799 - - - - - - 0.799 - - - PHD finger protein 20 [Source:HGNC Symbol;Acc:HGNC:16098]
17. HAPLN1 ENSGALG00000015627 14942 0.796 - - - - - - 0.796 - - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
18. ATP2B1 ENSGALG00000030550 15123 0.794 - - - - - - 0.794 - - - ATPase plasma membrane Ca2+ transporting 1 [Source:NCBI gene;Acc:374244]
19. EIF5B ENSGALG00000016764 30681 0.794 - - - - - - - 0.794 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
20. ROCK1 ENSGALG00000014922 4020 0.792 - - - - - - 0.792 - - - Rho-associated, coiled-coil containing protein kinase 1 [Source:NCBI gene;Acc:373970]
21. CSE1L ENSGALG00000004707 20653 0.79 - - - - - - 0.790 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
22. CENPP ENSGALG00000004687 6707 0.789 - - - - - - 0.789 - - - centromere protein P [Source:NCBI gene;Acc:415952]
23. ENSGALG00000017396 ENSGALG00000017396 9028 0.787 - - - - - - 0.787 - - -
24. CTNNBL1 ENSGALG00000006817 6765 0.786 - - - - - - - 0.786 - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
25. WDR25 ENSGALG00000028897 228 0.781 - - - - - - - 0.781 - - WD repeat domain 25 [Source:HGNC Symbol;Acc:HGNC:21064]
26. ADI1 ENSGALG00000025796 8636 0.78 - - - - - - 0.780 - - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
27. UCHL3 ENSGALG00000016921 16208 0.78 - - - - - - 0.780 - - - ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
28. SKP2 ENSGALG00000003547 14637 0.779 - - - - - - 0.779 - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
29. PDE3B ENSGALG00000006035 3732 0.779 - - - - - - 0.779 - - - phosphodiesterase 3B [Source:NCBI gene;Acc:423064]
30. NDUFA12 ENSGALG00000011325 19807 0.778 - - - - - - 0.778 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
31. TMED7 ENSGALG00000028484 21008 0.778 - - - - - - 0.778 - - - Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
32. UBR2 ENSGALG00000009906 7717 0.778 - - - - - - 0.778 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
33. SMAP1 ENSGALG00000015959 4665 0.776 - - - - - - - 0.776 - - small ArfGAP 1 [Source:HGNC Symbol;Acc:HGNC:19651]
34. PSMB2 ENSGALG00000026421 51885 0.775 - - - - - - 0.775 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
35. TARDBP ENSGALG00000002906 24748 0.774 - - - - - - 0.774 - - - TAR DNA binding protein [Source:NCBI gene;Acc:419453]
36. RYK ENSGALG00000006488 10533 0.772 - - - - - - - 0.772 - - receptor-like tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:10481]
37. STRN3 ENSGALG00000040464 9045 0.771 - - - - - - - 0.771 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
38. KIAA1551 ENSGALG00000045168 3435 0.771 - - - - - - 0.771 - - - KIAA1551, transcript variant X1
39. UMPS ENSGALG00000011770 11331 0.77 - - - - - - 0.770 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
40. NUBPL ENSGALG00000009983 3328 0.77 - - - - - - - 0.770 - - nucleotide binding protein like [Source:HGNC Symbol;Acc:HGNC:20278]
41. HCFC2 ENSGALG00000029616 4525 0.77 - - - - - - 0.770 - - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
42. EIF4A2 ENSGALG00000008684 58507 0.769 - - - - - - 0.769 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
43. PARP1 ENSGALG00000009228 39433 0.767 - - - - - - 0.767 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
44. DPYSL2 ENSGALG00000000227 9668 0.767 - - - - - - 0.767 - - - dihydropyrimidinase like 2 [Source:NCBI gene;Acc:395155]
45. ASB9 ENSGALG00000016563 2780 0.767 - - - - - - 0.767 - - - ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
46. ENSGALG00000009863 ENSGALG00000009863 7375 0.765 - - - - - - 0.765 - - -
47. SP3 ENSGALG00000031796 8997 0.765 - - - - - - 0.765 - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
48. DDX19B ENSGALG00000039967 49600 0.764 - - - - - - 0.764 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
49. ACAP2 ENSGALG00000007040 4182 0.764 - - - - - - 0.764 - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
50. SREK1 ENSGALG00000014775 13961 0.762 - - - - - - - 0.762 - - splicing regulatory glutamic acid and lysine rich protein 1, transcript variant X3
51. ATG3 ENSGALG00000015204 11277 0.762 - - - - - - 0.762 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]
52. F5 ENSGALG00000029298 1850 0.762 - - - - - - - 0.762 - - coagulation factor V [Source:HGNC Symbol;Acc:HGNC:3542]
53. LBR 6686 0.761 - - - - - - - 0.761 - - lamin B receptor, transcript variant X4
54. PTGFRN ENSGALG00000015464 14584 0.761 - - - - - - 0.761 - - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
55. ZMYM2 ENSGALG00000017139 3747 0.76 - - - - - - - 0.760 - - zinc finger MYM-type containing 2, transcript variant X10
56. ZBED4 ENSGALG00000032659 5313 0.759 - - - - - - 0.759 - - - zinc finger BED-type containing 4 [Source:NCBI gene;Acc:417734]
57. BRWD3 ENSGALG00000007151 3495 0.758 - - - - - - 0.758 - - - bromodomain and WD repeat domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17342]
58. EMC3 ENSGALG00000003738 10363 0.757 - - - - - - - 0.757 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
59. RRP15 ENSGALG00000009615 3652 0.757 - - - - - - 0.757 - - - ribosomal RNA processing 15 homolog [Source:HGNC Symbol;Acc:HGNC:24255]
60. RANBP1 ENSGALG00000002107 17715 0.757 - - - - - - 0.757 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
61. TMEM30A ENSGALG00000015904 8533 0.756 - - - - - - 0.756 - - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
62. BTBD9 ENSGALG00000010131 1870 0.756 - - - - - - - 0.756 - - BTB domain containing 9 [Source:NCBI gene;Acc:421429]
63. BLMH ENSGALG00000004259 36907 0.756 - - - - - - - 0.756 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
64. IKBKAP 4508 0.754 - - - - - - 0.754 - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
65. GXYLT1 ENSGALG00000009532 5682 0.753 - - - - - - 0.753 - - - glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
66. HELLS ENSGALG00000005451 7094 0.753 - - - - - - - 0.753 - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
67. GMPPB ENSGALG00000002500 9454 0.752 - - - - - - 0.752 - - - GDP-mannose pyrophosphorylase B [Source:NCBI gene;Acc:415924]
68. GNPDA2 ENSGALG00000014210 2213 0.752 - - - - - - - 0.752 - - glucosamine-6-phosphate deaminase 2, transcript variant X3
69. EHD3 ENSGALG00000009086 14407 0.751 - - - - - - 0.751 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
70. EMG1 ENSGALG00000014568 8102 0.751 - - - - - - 0.751 - - - EMG1, N1-specific pseudouridine methyltransferase [Source:NCBI gene;Acc:418292]
71. ALG2 ENSGALG00000013573 5229 0.751 - - - - - - 0.751 - - - ALG2, alpha-1,3/1,6-mannosyltransferase [Source:HGNC Symbol;Acc:HGNC:23159]
72. GLRX3 ENSGALG00000010464 22578 0.75 - - - - - - 0.750 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
73. CHM ENSGALG00000006906 4953 0.749 - - - - - - - 0.749 - - CHM, Rab escort protein 1 [Source:NCBI gene;Acc:422266]
74. PRKACB ENSGALG00000028530 12506 0.749 - - - - - - - 0.749 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
75. SKAP2 ENSGALG00000030081 13746 0.747 - - - - - - 0.747 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
76. DAD1 ENSGALG00000035626 32604 0.747 - - - - - - - 0.747 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
77. CWC27 ENSGALG00000014747 8389 0.747 - - - - - - 0.747 - - - CWC27 spliceosome associated protein homolog [Source:HGNC Symbol;Acc:HGNC:10664]
78. TRPC4AP ENSGALG00000003147 3967 0.747 - - - - - - - 0.747 - - transient receptor potential cation channel subfamily C member 4 associated protein [Source:NCBI gene;Acc:428134]
79. NDUFV2 ENSGALG00000036625 29234 0.746 - - - - - - 0.746 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
80. MADH2 MADH2 13017 0.746 - - - - - - 0.746 - - -
81. C1H21ORF91 ENSGALG00000028290 5550 0.745 - - - - - - - 0.745 - - chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
82. DNAJA4 ENSGALG00000036850 6847 0.744 - - - - - - 0.744 - - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
83. RPL6 ENSGALG00000004818 253572 0.744 - - - - - - - - - 0.744 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
84. FCF1 ENSGALG00000010275 24928 0.744 - - - - - - 0.744 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
85. ZFYVE9 ENSGALG00000010613 2421 0.743 - - - - - - 0.743 - - - zinc finger FYVE-type containing 9 [Source:HGNC Symbol;Acc:HGNC:6775]
86. ZNF385D ENSGALG00000011283 2578 0.743 - - - - - - - - - 0.743 zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
87. MSH6 ENSGALG00000008957 6396 0.743 - - - - - - - 0.743 - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
88. PRKAR1A ENSGALG00000004237 4785 0.742 - - - - - - 0.742 - - - protein kinase cAMP-dependent type I regulatory subunit alpha [Source:NCBI gene;Acc:417438]
89. TTC3 ENSGALG00000016050 4115 0.742 - - - - - - 0.742 - - - tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12393]
90. FAT1 ENSGALG00000013579 6030 0.742 - - - - - - - - - 0.742 FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
91. SSR3 ENSGALG00000028683 24334 0.741 - - - - - - 0.741 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
92. PHF3 ENSGALG00000016267 4148 0.741 - - - - - - 0.741 - - - PHD finger protein 3 [Source:HGNC Symbol;Acc:HGNC:8921]
93. NXT2 ENSGALG00000008092 2477 0.741 - - - - - - 0.741 - - - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
94. SOX11 ENSGALG00000016397 12144 0.741 - - - - - - 0.741 - - - SRY-box 11 [Source:NCBI gene;Acc:396104]
95. GOLGA7 ENSGALG00000003483 26525 0.74 - - - - - - 0.740 - - - golgin A7 [Source:NCBI gene;Acc:426787]
96. YWHAZ ENSGALG00000031387 84985 0.74 - - - - - - 0.740 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
97. PPDPF ENSGALG00000005849 16711 0.74 - - - - - - 0.740 - - - pancreatic progenitor cell differentiation and proliferation factor [Source:NCBI gene;Acc:419245]
98. GLO1 ENSGALG00000010127 31662 0.739 - - - - - - 0.739 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
99. TCTN2 ENSGALG00000023683 3596 0.738 - - - - - - 0.738 - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
100. RP2 ENSGALG00000016728 3291 0.738 - - - - - - 0.738 - - - RP2, ARL3 GTPase activating protein [Source:NCBI gene;Acc:418675]

There are 138 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA