Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ABCF3

Gene Name Gene ID Reads Annotation
ABCF3 ENSGALG00000008480 974 ATP binding cassette subfamily F member 3 [Source:HGNC Symbol;Acc:HGNC:72]











Genes with expression patterns similar to ABCF3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ABCF3 ENSGALG00000008480 974 4 - 1.000 1.000 - - 1.000 - - - 1.000 ATP binding cassette subfamily F member 3 [Source:HGNC Symbol;Acc:HGNC:72]
2. ENSGALG00000027637 ENSGALG00000027637 7 1 - - - - - 1.000 - - - -
3. SRD5A1 ENSGALG00000013063 1 1 - - - - - 1.000 - - - - steroid 5 alpha-reductase 1 [Source:HGNC Symbol;Acc:HGNC:11284]
4. ENSGALG00000024319 ENSGALG00000024319 2 1 - - - - - 1.000 - - - -
5. TGM4 ENSGALG00000033171 19 1 - - - - - 1.000 - - - - transglutaminase 4 [Source:NCBI gene;Acc:420706]
6. TRIM2 ENSGALG00000009207 44 1 - - - - - 1.000 - - - - tripartite motif containing 2 [Source:NCBI gene;Acc:100857562]
7. BRF2 ENSGALG00000003124 1 1 - - - - - 1.000 - - - - BRF2, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:17298]
8. EPB41L5 ENSGALG00000011605 18 1 - - - - - 1.000 - - - - erythrocyte membrane protein band 4.1 like 5 [Source:HGNC Symbol;Acc:HGNC:19819]
9. EPGN ENSGALG00000010859 187 1 - - - - - 1.000 - - - - epithelial mitogen [Source:NCBI gene;Acc:497270]
10. DOK4 ENSGALG00000001160 2 1 - - - - - 1.000 - - - - docking protein 4 [Source:HGNC Symbol;Acc:HGNC:19868]
11. HORMAD2 ENSGALG00000008037 1 1 - - - - - 1.000 - - - - HORMA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28383]
12. CITED2 ENSGALG00000013818 4 1 - - - - - 1.000 - - - - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 [Source:NCBI gene;Acc:395399]
13. LOC423752 ENSGALG00000020899 17 1 - - - - - 1.000 - - - - uncharacterized LOC423752, transcript variant X1
14. ENSGALG00000028222 ENSGALG00000028222 44 1 - - - - - 1.000 - - - -
15. MESP2_1 ENSGALG00000008275 1 1 - - - - - 1.000 - - - - mesoderm posterior bHLH transcription factor 2
16. MBL2 ENSGALG00000002507 17 1 - - - - - 1.000 - - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
17. ADTRP ENSGALG00000032683 66 1 - - - - - 1.000 - - - - androgen dependent TFPI regulating protein [Source:HGNC Symbol;Acc:HGNC:21214]
18. CALCRL ENSGALG00000002632 4 1 - - - - - 1.000 - - - - calcitonin receptor like receptor [Source:NCBI gene;Acc:423990]
19. HTR3A ENSGALG00000007004 7 1 - - - - - 1.000 - - - - 5-hydroxytryptamine receptor 3A [Source:HGNC Symbol;Acc:HGNC:5297]
20. ZP2 ENSGALG00000002428 10 1 - - - - - 1.000 - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
21. ENSGALG00000019667 ENSGALG00000019667 16 1 - - - - - 1.000 - - - -
22. C2CD2L ENSGALG00000034014 2 1 - - - - - 1.000 - - - - C2CD2 like [Source:NCBI gene;Acc:428233]
23. U6_1 U6_1 3 1 - - - - - 1.000 - - - -
24. ZHX2 ENSGALG00000043827 13 1 - - - - - 1.000 - - - - zinc fingers and homeoboxes 2 [Source:HGNC Symbol;Acc:HGNC:18513]
25. WWOX ENSGALG00000005377 0 1 - - - - - 1.000 - - - - WW domain containing oxidoreductase [Source:NCBI gene;Acc:415801]
26. ENSGALG00000020592 ENSGALG00000020592 2 1 - - - - - 1.000 - - - -
27. DLX1 ENSGALG00000018439 16 1 - - - - - 1.000 - - - - distal-less homeobox 1 [Source:NCBI gene;Acc:429283]
28. CLIP4 ENSGALG00000009024 4 1 - - - - - 1.000 - - - - CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
29. TMEM63C ENSGALG00000010406 1 1 - - - - - 1.000 - - - - transmembrane protein 63C [Source:HGNC Symbol;Acc:HGNC:23787]
30. GFAP ENSGALG00000000909 21 1 - - - - - 1.000 - - - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
31. gga-mir-3064 ENSGALG00000027517 1 1 - - - - - 1.000 - - - - gga-mir-3064 [Source:miRBase;Acc:MI0022380]
32. PIT-1 PIT-1 8 1 - - - - - 1.000 - - - -
33. CXorf22 CXorf22 20 1 - - - - - 1.000 - - - -
34. GUCA1A ENSGALG00000001431 6 1 - - - - - 1.000 - - - - guanylate cyclase activator 1A [Source:NCBI gene;Acc:374216]
35. GLDN ENSGALG00000013293 1 1 - - - - - 1.000 - - - - gliomedin [Source:HGNC Symbol;Acc:HGNC:29514]
36. NR5A1 ENSGALG00000001080 141 0.986 - - - - - 0.986 - - - - nuclear receptor subfamily 5 group A member 1 [Source:NCBI gene;Acc:395960]
37. MAPRE2 ENSGALG00000015215 58 0.953 - - - - - 0.953 - - - - microtubule associated protein RP/EB family member 2 [Source:NCBI gene;Acc:421105]
38. C22orf23 ENSGALG00000012293 21 0.951 - - - - - - - - - 0.951 chromosome 22 open reading frame 23 [Source:HGNC Symbol;Acc:HGNC:18589]
39. LRRN4 ENSGALG00000008815 481 0.937 - - 0.937 - - - - - - - leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
40. CAPN2 ENSGALG00000009360 8 0.936 - - - - - 0.936 - - - - calpain 2 [Source:NCBI gene;Acc:395963]
41. PIRT 41 0.936 - - - - - 0.936 - - - - phosphoinositide-interacting regulator of transient receptor potential channels
42. EFCAB6 ENSGALG00000014188 139 0.93 - - - - - 0.930 - - - - EF-hand calcium binding domain 6, transcript variant X3
43. WARS ENSGALG00000011228 193 0.916 - - 0.916 - - - - - - - tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
44. NOX4 ENSGALG00000017235 67 0.911 - - - - - - - - - 0.911 NADPH oxidase 4 [Source:NCBI gene;Acc:419012]
45. ACD ENSGALG00000044706 6 0.904 - - - - - 0.904 - - - - ACD, shelterin complex subunit and telomerase recruitment factor, transcript variant X4
46. CAT-1 CAT-1 115 0.9 - - 0.900 - - - - - - -
47. ENC1 ENSGALG00000014930 10 0.899 - - - - - 0.899 - - - - ectodermal-neural cortex 1 [Source:HGNC Symbol;Acc:HGNC:3345]
48. SUN2 ENSGALG00000028230 5 0.894 - - - - - 0.894 - - - - Sad1 and UNC84 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:14210]
49. TIAM1 ENSGALG00000015842 17 0.894 - - - - - 0.894 - - - - T cell lymphoma invasion and metastasis 1 [Source:HGNC Symbol;Acc:HGNC:11805]
50. MLLT6 ENSGALG00000034693 162 0.892 - - 0.892 - - - - - - - MLLT6, PHD finger containing [Source:HGNC Symbol;Acc:HGNC:7138]
51. CKV6.3 CKV6.3 13 0.891 - - - - - 0.891 - - - -
52. ENSGALG00000026169 ENSGALG00000026169 30 0.869 - - 0.869 - - - - - - -
53. EPHA10 ENSGALG00000001912 5 0.868 - - 0.868 - - - - - - - EPH receptor A10, transcript variant X1
54. ENSGALG00000020389 ENSGALG00000020389 5 0.868 - - 0.868 - - - - - - -
55. SLC6A18 ENSGALG00000013180 6 0.868 - - 0.868 - - - - - - - solute carrier family 6 member 18 [Source:HGNC Symbol;Acc:HGNC:26441]
56. GTPBP8 ENSGALG00000015190 21 0.863 - - 0.863 - - - - - - - GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]
57. KLHL23 ENSGALG00000020737 13 0.862 - - 0.862 - - - - - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
58. UVRAG ENSGALG00000000845 40 0.861 - - - - - 0.861 - - - - UV radiation resistance associated [Source:NCBI gene;Acc:419091]
59. ENSGALG00000018499 ENSGALG00000018499 100 0.859 - - - - - 0.859 - - - -
60. ENSGALG00000017269 ENSGALG00000017269 13 0.858 - - 0.858 - - - - - - -
61. AMDHD1 ENSGALG00000011414 245 0.854 - - - - - - - - - 0.854 amidohydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28577]
62. AGBL2 ENSGALG00000029618 8 0.853 - - 0.853 - - - - - - - ATP/GTP binding protein like 2 [Source:HGNC Symbol;Acc:HGNC:26296]
63. ENSGALG00000028038 ENSGALG00000028038 9 0.851 - - 0.851 - - - - - - -
64. TNIP1 ENSGALG00000004496 355 0.851 - - 0.851 - - - - - - - TNFAIP3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16903]
65. PNPLA2 ENSGALG00000014569 7 0.851 - - 0.851 - - - - - - - patatin like phospholipase domain containing 2 [Source:NCBI gene;Acc:431066]
66. KANSL1L ENSGALG00000002866 44 0.85 - - 0.850 - - - - - - - KAT8 regulatory NSL complex subunit 1-like, transcript variant X1
67. PRLR ENSGALG00000003446 19 0.85 - - 0.850 - - - - - - - prolactin receptor [Source:NCBI gene;Acc:395660]
68. ZDHHC15 ENSGALG00000007800 24 0.847 - - 0.847 - - - - - - - zinc finger DHHC-type containing 15 [Source:HGNC Symbol;Acc:HGNC:20342]
69. ENSGALG00000019568 ENSGALG00000019568 25 0.844 - - 0.844 - - - - - - -
70. ENSGALG00000018879 ENSGALG00000018879 9 0.844 - - - - - 0.844 - - - -
71. MTMR3 ENSGALG00000008051 9 0.843 - - 0.843 - - - - - - - myotubularin related protein 3 [Source:NCBI gene;Acc:417015]
72. FBXO16 7 0.842 - - 0.842 - - - - - - - F-box protein 16, transcript variant X1
73. ASTL ENSGALG00000037220 2775 0.841 - - 0.841 - - - - - - - astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]
74. ENSGALG00000026461 ENSGALG00000026461 61 0.841 - - 0.841 - - - - - - -
75. STARD9 65 0.84 - - 0.840 - - - - - - - StAR related lipid transfer domain containing 9, transcript variant X1
76. ADAMTS15 ENSGALG00000001407 11 0.839 - - 0.839 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 15 [Source:HGNC Symbol;Acc:HGNC:16305]
77. PDPR ENSGALG00000002690 45 0.835 - - - - - 0.835 - - - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:HGNC:30264]
78. SLC22A13 ENSGALG00000005934 8 0.832 - - - - - 0.832 - - - - solute carrier family 22 member 13
79. AKAP6 ENSGALG00000009995 77 0.83 - - 0.830 - - - - - - - A-kinase anchoring protein 6 [Source:HGNC Symbol;Acc:HGNC:376]
80. U11 U11 11 0.829 - - 0.829 - - - - - - -
81. PDE1C ENSGALG00000039935 16 0.827 - - 0.827 - - - - - - - phosphodiesterase 1C [Source:HGNC Symbol;Acc:HGNC:8776]
82. STAG3 STAG3 34 0.827 - - 0.827 - - - - - - -
83. GLRB ENSGALG00000009395 9 0.827 - - - - - 0.827 - - - - glycine receptor beta [Source:HGNC Symbol;Acc:HGNC:4329]
84. USP13 ENSGALG00000008909 8 0.826 - - - - - 0.826 - - - - ubiquitin specific peptidase 13 (isopeptidase T-3) [Source:NCBI gene;Acc:429286]
85. TSPAN12 ENSGALG00000009029 2145 0.825 - - 0.825 - - - - - - - tetraspanin 12 [Source:NCBI gene;Acc:417763]
86. NFXL1 ENSGALG00000014138 36 0.825 - - 0.825 - - - - - - - nuclear transcription factor, X-box binding like 1 [Source:HGNC Symbol;Acc:HGNC:18726]
87. TTC33 ENSGALG00000014826 71 0.824 - - - - - 0.824 - - - - tetratricopeptide repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:29959]
88. ANGPTL1 ENSGALG00000004290 1922 0.824 - - - - - 0.824 - - - - angiopoietin like 1 [Source:NCBI gene;Acc:770850]
89. OGDHL ENSGALG00000002266 57 0.824 - - 0.824 - - - - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
90. KIAA0825 ENSGALG00000014664 25 0.824 - - - - - 0.824 - - - - KIAA0825, transcript variant X7
91. CHST3 ENSGALG00000024056 308 0.821 - - - - - - - - - 0.821 carbohydrate sulfotransferase 3 [Source:NCBI gene;Acc:396018]
92. ABLIM3 ENSGALG00000002790 101 0.821 - - - - - 0.821 - - - - actin binding LIM protein family member 3 [Source:HGNC Symbol;Acc:HGNC:29132]
93. LRRK2 ENSGALG00000007161 66 0.821 - - - - - 0.821 - - - - leucine rich repeat kinase 2 [Source:NCBI gene;Acc:427844]
94. RGMB ENSGALG00000015284 14 0.82 - - 0.820 - - - - - - - repulsive guidance molecule BMP co-receptor b [Source:HGNC Symbol;Acc:HGNC:26896]
95. RNASET2 ENSGALG00000011426 40 0.819 - - 0.819 - - - - - - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
96. BLVRA ENSGALG00000031786 23 0.817 - - 0.817 - - - - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
97. GLB1L ENSGALG00000011328 223 0.815 - - 0.815 - - - - - - - galactosidase beta 1 like [Source:HGNC Symbol;Acc:HGNC:28129]
98. HERPUD1 ENSGALG00000001220 18 0.811 - - 0.811 - - - - - - - homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
99. SVOPL ENSGALG00000012812 27 0.81 - - 0.810 - - - - - - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
100. TRPA1 ENSGALG00000034751 148 0.809 - - 0.809 - - - - - - - Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318460]

There are 62 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA