Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ABCF3

Gene Name Gene ID Reads Annotation
ABCF3 ENSDARG00000089705 195 ATP-binding cassette, sub-family F (GCN20), member 3 [Source:ZFIN;Acc:ZDB-GENE-050517-32]










Genes with expression patterns similar to ABCF3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ABCF3 ENSDARG00000089705 195 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATP-binding cassette, sub-family F (GCN20), member 3 [Source:ZFIN;Acc:ZDB-GENE-050517-32]
2. sh3bp2 ENSDARG00000021982 61 1.602 - - 0.897 - - - 0.705 - - SH3-domain binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-268]
3. spra ENSDARG00000004406 268 1.595 - 0.860 - 0.735 - - - - - sepiapterin reductase a [Source:ZFIN;Acc:ZDB-GENE-050522-412]
4. exoc3l1 ENSDARG00000051899, ENSDARG00000113508, ENSDARG00000114148 195 1.548 - - 0.771 - - - 0.777 - - exocyst complex component 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-36]
5. CNTLN ENSDARG00000033345 128 1.535 - 0.759 - - - - 0.776 - - centlein, centrosomal protein [Source:ZFIN;Acc:ZDB-GENE-090313-409]
6. timm8a ENSDARG00000023672, ENSDARG00000114203 1075 1.532 - 0.734 0.798 - - - - - - translocase of inner mitochondrial membrane 8 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-158]
7. mhc1zba ENSDARG00000036588 761 1.525 - 0.725 0.800 - - - - - - major histocompatibility complex class I ZBA [Source:ZFIN;Acc:ZDB-GENE-040426-2149]
8. zgc:173709 86 1.479 - - - 0.769 - - 0.710 - - zgc:173709
9. akap17a ENSDARG00000104768 275 1.464 - - - 0.732 - - 0.732 - - A kinase (PRKA) anchor protein 17A [Source:ZFIN;Acc:ZDB-GENE-040426-1460]
10. zbtb2a ENSDARG00000044038 88 1.442 - - - - - - 0.729 - 0.713 zinc finger and BTB domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-040426-726]
11. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.435 0.710 0.725 - - - - - - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
12. si:dkey-3d4.3 ENSDARG00000074079 365 1.422 - - - - - - - 0.713 0.709 si:dkey-3d4.3 [Source:ZFIN;Acc:ZDB-GENE-070912-527]
13. si:dkeyp-75d2.5 si:dkeyp-75d2.5 21 1.417 - - - - - - 0.710 0.707 -
14. raf1b ENSDARG00000059406 301 1.408 - - 0.704 - - - - - 0.704 Raf-1 proto-oncogene, serine/threonine kinase b [Source:ZFIN;Acc:ZDB-GENE-090826-2]
15. cep85l ENSDARG00000020777 1121 0.903 - 0.903 - - - - - - - centrosomal protein 85, like [Source:ZFIN;Acc:ZDB-GENE-041014-309]
16. blk ENSDARG00000007783 10 0.899 - - - - - - 0.899 - - BLK proto-oncogene, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-040724-106]
17. serpinf1 ENSDARG00000069048 2083 0.892 - 0.892 - - - - - - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
18. apnl ENSDARG00000090900 21 0.891 - - 0.891 - - - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
19. CABZ01078314.1 CABZ01078314.1 44 0.89 - - 0.890 - - - - - -
20. si:ch211-262i10.2 12 0.89 - - 0.890 - - - - - - si:ch211-262i10.2
21. si:dkey-122c11.1 ENSDARG00000093747 19 0.889 - - 0.889 - - - - - - si:dkey-122c11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-74]
22. si:dkeyp-84g1.3 si:dkeyp-84g1.3 25 0.888 - - 0.888 - - - - - -
23. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 0.886 - - 0.886 - - - - - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
24. si:ch211-243a22.1 si:ch211-243a22.1 42 0.885 - - 0.885 - - - - - -
25. zbtb25 ENSDARG00000042383 94 0.885 - - 0.885 - - - - - - zinc finger and BTB domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-041001-125]
26. si:ch211-181d7.3 ENSDARG00000068621 87 0.884 - - 0.884 - - - - - - si:ch211-181d7.3 [Source:ZFIN;Acc:ZDB-GENE-121214-30]
27. CCDC176 CCDC176 118 0.883 - - - - - - 0.883 - -
28. cacnb4a ENSDARG00000009738 28 0.882 - - 0.882 - - - - - - calcium channel, voltage-dependent, beta 4a subunit [Source:ZFIN;Acc:ZDB-GENE-080320-2]
29. slc12a10.2 ENSDARG00000071173 92 0.882 - - 0.882 - - - - - - solute carrier family 12 (sodium/potassium/chloride transporters), member 10, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-425]
30. ft1 ENSDARG00000059056 102 0.88 - - 0.880 - - - - - - alpha(1,3)fucosyltransferase gene 1 [Source:ZFIN;Acc:ZDB-GENE-990715-17]
31. gpr183 gpr183 25 0.876 - - 0.876 - - - - - -
32. dclk1a ENSDARG00000018856 177 0.875 - - 0.875 - - - - - - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
33. senp3b ENSDARG00000056741 1296 0.873 - 0.873 - - - - - - - SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]
34. BX571739.1 BX571739.1 45 0.873 - - 0.873 - - - - - -
35. ncam1b ENSDARG00000007220 233 0.869 - - 0.869 - - - - - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
36. eif4enif1 ENSDARG00000016177 238 0.867 - - 0.867 - - - - - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:ZFIN;Acc:ZDB-GENE-050320-113]
37. extl2 ENSDARG00000063191 118 0.866 - - 0.866 - - - - - - exostosin-like glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1122]
38. si:ch211-207c6.5 si:ch211-207c6.5 72 0.866 - - - - - - 0.866 - -
39. snw1 ENSDARG00000091563 263 0.865 - - - - - - 0.865 - - SNW domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-571]
40. igdcc4 ENSDARG00000076919 1303 0.865 - 0.865 - - - - - - - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
41. si:dkey-93m18.3 ENSDARG00000092664 30 0.865 - - 0.865 - - - - - - si:dkey-93m18.3 [Source:ZFIN;Acc:ZDB-GENE-091204-346]
42. si:dkey-81p22.11 ENSDARG00000093797 68 0.862 - - 0.862 - - - - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
43. zgc:65895 ENSDARG00000034086 1258 0.861 - - 0.861 - - - - - - zgc:65895 [Source:ZFIN;Acc:ZDB-GENE-040426-1466]
44. chchd6b ENSDARG00000045978 251 0.86 - 0.860 - - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-041114-95]
45. pgap2 ENSDARG00000044596 60 0.86 - - - - - - 0.860 - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
46. F2RL3 ENSDARG00000079399 29 0.859 - - 0.859 - - - - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
47. slc25a21 ENSDARG00000060564 344 0.858 - - 0.858 - - - - - - solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 [Source:ZFIN;Acc:ZDB-GENE-060929-664]
48. fam175b fam175b 37 0.858 - - 0.858 - - - - - -
49. fam173b ENSDARG00000033451 513 0.857 - - 0.857 - - - - - - family with sequence similarity 173, member B [Source:ZFIN;Acc:ZDB-GENE-041114-90]
50. zgc:113389 zgc:113389 123 0.857 - - 0.857 - - - - - -
51. galnt14 ENSDARG00000023448 102 0.854 - - 0.854 - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) [Source:ZFIN;Acc:ZDB-GENE-041014-351]
52. zgc:165539 ENSDARG00000027639 20 0.852 - - 0.852 - - - - - - zgc:165539 [Source:ZFIN;Acc:ZDB-GENE-030131-5478]
53. dnajb13 ENSDARG00000043157 50 0.852 - - 0.852 - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 13 [Source:ZFIN;Acc:ZDB-GENE-040910-4]
54. def8 ENSDARG00000068208 50 0.852 - - - - - 0.852 - - - differentially expressed in FDCP 8 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041114-96]
55. CR848706.1 CR848706.1 128 0.85 - - 0.850 - - - - - -
56. nab2 ENSDARG00000078076 108 0.848 - 0.848 - - - - - - - NGFI-A binding protein 2 (EGR1 binding protein 2) [Source:ZFIN;Acc:ZDB-GENE-080204-105]
57. SLC36A4 ENSDARG00000039661 175 0.846 - - - 0.846 - - - - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
58. mir301c 84 0.846 - - 0.846 - - - - - - microRNA 301c
59. si:ch211-162i8.4 ENSDARG00000087168, ENSDARG00000094484 69 0.845 - - 0.845 - - - - - - si:ch211-162i8.4 [Source:ZFIN;Acc:ZDB-GENE-110914-48]
60. SLC3A2 SLC3A2 135 0.844 - - 0.844 - - - - - -
61. guf1 ENSDARG00000029088 231 0.844 - 0.844 - - - - - - - GUF1 homolog, GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-4289]
62. setd3 ENSDARG00000016513 1507 0.843 - 0.843 - - - - - - - SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
63. ADM ADM 122 0.842 - - - - - - 0.842 - -
64. zgc:154075 ENSDARG00000067630 284 0.841 - - 0.841 - - - - - - zgc:154075 [Source:ZFIN;Acc:ZDB-GENE-060929-910]
65. fem1c ENSDARG00000102147 336 0.841 - 0.841 - - - - - - - fem-1 homolog c (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-031008-3]
66. chrna2a ENSDARG00000006602 163 0.841 - - 0.841 - - - - - - cholinergic receptor, nicotinic, alpha 2a (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-2]
67. ilvbl ENSDARG00000017126 356 0.839 - - 0.839 - - - - - - ilvB (bacterial acetolactate synthase)-like [Source:ZFIN;Acc:ZDB-GENE-040426-1623]
68. ATXN7L1 ENSDARG00000089860 420 0.839 - 0.839 - - - - - - - ataxin 7-like 1 [Source:ZFIN;Acc:ZDB-GENE-131127-383]
69. capslb ENSDARG00000003414 77 0.839 - 0.839 - - - - - - - calcyphosine-like b [Source:ZFIN;Acc:ZDB-GENE-050417-298]
70. FAM53C FAM53C 769 0.838 - 0.838 - - - - - - -
71. trim35-39 ENSDARG00000071241 464 0.836 - 0.836 - - - - - - - tripartite motif containing 35-39 [Source:ZFIN;Acc:ZDB-GENE-080219-13]
72. chrna5 ENSDARG00000003420 137 0.836 - - 0.836 - - - - - - cholinergic receptor, nicotinic, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-050417-440]
73. fgf4 ENSDARG00000105230 407 0.833 - 0.833 - - - - - - - fibroblast growth factor 4 [Source:ZFIN;Acc:ZDB-GENE-001006-1]
74. si:ch211-236p5.3 ENSDARG00000086418 138 0.833 - - 0.833 - - - - - - si:ch211-236p5.3 [Source:ZFIN;Acc:ZDB-GENE-081028-31]
75. CABZ01101003.1 CABZ01101003.1 858 0.832 - - 0.832 - - - - - -
76. ATP5J_2 ATP5J_2 2381 0.831 - 0.831 - - - - - - -
77. opa1 ENSDARG00000070801 57 0.83 - - 0.830 - - - - - - optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
78. abcb10 ENSDARG00000061591 253 0.829 - 0.829 - - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 10 [Source:ZFIN;Acc:ZDB-GENE-040525-2]
79. st3gal2 ENSDARG00000112898 370 0.829 - - - 0.829 - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050419-181]
80. rassf10a 417 0.829 - - 0.829 - - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
81. gtf3c2 ENSDARG00000004574 153 0.827 - - - - - - - - 0.827 general transcription factor IIIC, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-041014-349]
82. cep76 ENSDARG00000058319 143 0.827 - - 0.827 - - - - - - centrosomal protein 76 [Source:ZFIN;Acc:ZDB-GENE-070820-5]
83. si:ch211-214p16.2 ENSDARG00000094975 59 0.827 - - 0.827 - - - - - - si:ch211-214p16.2 [Source:NCBI gene;Acc:368902]
84. FARS2 ENSDARG00000091247 202 0.827 - - 0.827 - - - - - - phenylalanyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-38]
85. FAM120A ENSDARG00000075021 73 0.827 - - 0.827 - - - - - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
86. SLC24A2 ENSDARG00000042988 242 0.827 - - 0.827 - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-277]
87. si:ch211-255a21.4 si:ch211-255a21.4 26 0.826 - - - - - - - - 0.826
88. SHISA8 SHISA8 58 0.826 - - - - - - - - 0.826
89. mntb ENSDARG00000073988 1023 0.826 - 0.826 - - - - - - - MAX network transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-070820-8]
90. si:dkeyp-87a6.1 si:dkeyp-87a6.1 118 0.826 - 0.826 - - - - - - -
91. elavl2 ENSDARG00000040732 44 0.825 - - - - - - - - 0.825 ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
92. DUSP28 ENSDARG00000059695 1135 0.825 - - 0.825 - - - - - - dual specificity phosphatase 28 [Source:ZFIN;Acc:ZDB-GENE-131127-257]
93. nmd3 ENSDARG00000015676 303 0.824 - 0.824 - - - - - - - NMD3 ribosome export adaptor [Source:ZFIN;Acc:ZDB-GENE-050320-149]
94. galt ENSDARG00000069543 473 0.824 - 0.824 - - - - - - - galactose-1-phosphate uridylyltransferase [Source:ZFIN;Acc:ZDB-GENE-070112-172]
95. colq ENSDARG00000019692 656 0.824 - 0.824 - - - - - - - collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-110411-119]
96. si:dkey-97l20.5 si:dkey-97l20.5 33 0.823 - - - - - - - - 0.823
97. med25 ENSDARG00000038005, ENSDARG00000115713 1305 0.823 - 0.823 - - - - - - - mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]
98. MFSD3 MFSD3 407 0.823 - - 0.823 - - - - - -
99. IGFALS ENSDARG00000037836 133 0.823 - 0.823 - - - - - - - insulin-like growth factor binding protein, acid labile subunit [Source:ZFIN;Acc:ZDB-GENE-061009-25]
100. CR855996.2 ENSDARG00000104450 310 0.823 - - - - - - - - 0.823 ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]

There are 663 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA