Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ABCF2

Gene Name Gene ID Reads Annotation
ABCF2 ENSGALG00000034573 15639 ATP binding cassette subfamily F member 2 [Source:NCBI gene;Acc:426038]











Genes with expression patterns similar to ABCF2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ABCF2 ENSGALG00000034573 15639 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATP binding cassette subfamily F member 2 [Source:NCBI gene;Acc:426038]
2. MTF2 ENSGALG00000043087 15225 1.821 - - - - 0.951 - - 0.870 - - metal response element binding transcription factor 2 [Source:NCBI gene;Acc:395174]
3. CREPT CREPT 17142 1.742 - - - - 0.957 - - - - 0.785
4. MRPS11 ENSGALG00000006777 16009 1.728 - - - - 0.964 - - 0.764 - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
5. RILPL2 ENSGALG00000003321 5632 1.722 - - - - 0.958 - - - - 0.764 Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
6. C15H12ORF49 C15H12ORF49 13250 1.717 - - - - 0.963 - - - - 0.754
7. MORN4 ENSGALG00000006149 7772 1.685 - - - - 0.962 - - - - 0.723 MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
8. CWC22 ENSGALG00000009001 5984 1.668 - - - - 0.938 - 0.730 - - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
9. ACO1 ENSGALG00000002162 6645 1.618 - - - - 0.833 - 0.785 - - - aconitase 1, soluble [Source:NCBI gene;Acc:373916]
10. COX5A ENSGALG00000014121 55281 1.617 - - - - 0.867 - 0.750 - - - cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
11. VPRBP VPRBP 4037 1.605 - - - - - - - 0.779 - 0.826
12. PSMC6 ENSGALG00000012408 52068 1.603 - - - - 0.778 - 0.825 - - - proteasome 26S subunit, ATPase 6 [Source:NCBI gene;Acc:423586]
13. CENPJ ENSGALG00000017148 1415 1.561 - - - - - - - 0.777 - 0.784 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
14. SUPV3L1 ENSGALG00000004197 4141 1.548 - - - - - - - 0.774 - 0.774 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
15. SNX12 ENSGALG00000005659 9503 1.547 - - - - 0.826 - 0.721 - - - sorting nexin 12 [Source:NCBI gene;Acc:428704]
16. SOS1 ENSGALG00000039450 3941 1.486 - - - - - - - 0.759 - 0.727 SOS Ras/Rac guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:11187]
17. IST1 ENSGALG00000000811 10527 1.476 - - - - - - 0.724 0.752 - - IST1, ESCRT-III associated factor [Source:HGNC Symbol;Acc:HGNC:28977]
18. INCENP ENSGALG00000007537 16617 0.973 - - - - 0.973 - - - - - inner centromere protein [Source:NCBI gene;Acc:396270]
19. DNAJC2 ENSGALG00000008249 28064 0.973 - - - - 0.973 - - - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
20. C4orf27 C4orf27 16724 0.972 - - - - 0.972 - - - - -
21. SAMM50 ENSGALG00000014194 20437 0.971 - - - - 0.971 - - - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
22. TMEM18 ENSGALG00000028744 11779 0.97 - - - - 0.970 - - - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
23. NOL6 ENSGALG00000030730 7191 0.97 - - - - 0.970 - - - - - nucleolar protein 6
24. ETF1 ENSGALG00000002262 14560 0.969 - - - - 0.969 - - - - - eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:HGNC:3477]
25. LUC7L2 ENSGALG00000036238 11817 0.969 - - - - 0.969 - - - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
26. CCDC59 ENSGALG00000028648 9272 0.968 - - - - 0.968 - - - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
27. TRIM33 ENSGALG00000001976 7404 0.968 - - - - 0.968 - - - - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
28. IBA57 ENSGALG00000005328 4362 0.968 - - - - 0.968 - - - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
29. MAP1B ENSGALG00000014999 6288 0.968 - - - - 0.968 - - - - - microtubule associated protein 1B
30. TCF7L2 ENSGALG00000008883 13688 0.968 - - - - 0.968 - - - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
31. TMEM39B ENSGALG00000003287 4125 0.967 - - - - 0.967 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
32. USP1 ENSGALG00000010957 8297 0.967 - - - - 0.967 - - - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
33. SEC61A2 ENSGALG00000036300 4235 0.967 - - - - 0.967 - - - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
34. MED1 ENSGALG00000001708 9556 0.967 - - - - 0.967 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
35. TBRG4 ENSGALG00000038102 9269 0.967 - - - - 0.967 - - - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
36. MRPL46 ENSGALG00000006782 5033 0.967 - - - - 0.967 - - - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
37. TBC1D7 ENSGALG00000012731 4891 0.967 - - - - 0.967 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
38. NUP37 ENSGALG00000012759 9985 0.966 - - - - 0.966 - - - - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
39. RAE1 ENSGALG00000007653 8930 0.966 - - - - 0.966 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
40. EPB41L1 ENSGALG00000034171 3616 0.966 - - - - 0.966 - - - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
41. THBS1 ENSGALG00000009626 3521 0.966 - - - - 0.966 - - - - - thrombospondin 1 [Source:NCBI gene;Acc:373987]
42. CENPE ENSGALG00000013208 12337 0.966 - - - - 0.966 - - - - - centromere protein E, transcript variant X4
43. HMGB3 ENSGALG00000009071 12011 0.965 - - - - 0.965 - - - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
44. RNF113A ENSGALG00000000538 3985 0.965 - - - - 0.965 - - - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
45. PGAM5 ENSGALG00000002137 7700 0.965 - - - - 0.965 - - - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
46. PPAPDC1B PPAPDC1B 6698 0.965 - - - - 0.965 - - - - -
47. WDR51B WDR51B 5757 0.965 - - - - - - - 0.965 - -
48. BCL9 ENSGALG00000037655 4620 0.964 - - - - 0.964 - - - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
49. MRPL22 ENSGALG00000003919 2760 0.964 - - - - 0.964 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
50. FAM98A ENSGALG00000010428 9585 0.964 - - - - 0.964 - - - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
51. gga-mir-6584 ENSGALG00000028834 1481 0.963 - - - - 0.963 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
52. RALB ENSGALG00000026493 14590 0.963 - - - - 0.963 - - - - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
53. NDST2 ENSGALG00000005107 4224 0.963 - - - - 0.963 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
54. RAB21 ENSGALG00000010183 7718 0.963 - - - - 0.963 - - - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
55. MYEOV2 MYEOV2 5155 0.963 - - - - 0.963 - - - - -
56. UBE2G2 ENSGALG00000005667 12689 0.962 - - - - 0.962 - - - - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
57. KCTD9 ENSGALG00000000275 3455 0.962 - - - - 0.962 - - - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
58. UQCRC2 ENSGALG00000002490 23477 0.962 - - - - 0.962 - - - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
59. WHSC1L1 4065 0.962 - - - - 0.962 - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
60. HTRA3 ENSGALG00000034673 512 0.962 - - - - 0.962 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
61. M6PR ENSGALG00000031681 9442 0.961 - - - - 0.961 - - - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
62. OAF ENSGALG00000006715 12518 0.961 - - - - 0.961 - - - - - out at first homolog [Source:NCBI gene;Acc:395161]
63. HYOU1 ENSGALG00000007659 3555 0.961 - - - - 0.961 - - - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
64. PHKA1 ENSGALG00000004801 2510 0.961 - - - - 0.961 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
65. VPS8 ENSGALG00000006704 5419 0.961 - - - - 0.961 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
66. AGPAT3 ENSGALG00000031932 6903 0.961 - - - - 0.961 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
67. ABCC1 ENSGALG00000006646 2596 0.961 - - - - 0.961 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
68. SPG21 ENSGALG00000007262 8050 0.96 - - - - 0.960 - - - - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
69. CDC5L ENSGALG00000016704 22893 0.96 - - - - 0.960 - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
70. RBM26 ENSGALG00000016910 13769 0.96 - - - - 0.960 - - - - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
71. EPFIP1L ENSGALG00000007683 18050 0.96 - - - - 0.960 - - - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
72. BRP44L BRP44L 30452 0.959 - - - - 0.959 - - - - -
73. EIF3L ENSGALG00000012296 42627 0.959 - - - - 0.959 - - - - - eukaryotic translation initiation factor 3 subunit L [Source:NCBI gene;Acc:418033]
74. TNPO3 ENSGALG00000039420 5178 0.958 - - - - 0.958 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
75. MCM4 ENSGALG00000012915 13151 0.958 - - - - 0.958 - - - - - minichromosome maintenance complex component 4
76. HOXB3 ENSGALG00000043219 5198 0.957 - - - - 0.957 - - - - - homeobox B3 [Source:NCBI gene;Acc:395502]
77. TM2D2 ENSGALG00000003356 7088 0.957 - - - - 0.957 - - - - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
78. OPTC ENSGALG00000003554 3698 0.957 - - - - 0.957 - - - - - opticin [Source:NCBI gene;Acc:395130]
79. PUF60 ENSGALG00000039901 26902 0.956 - - - - 0.956 - - - - - poly(U) binding splicing factor 60 [Source:NCBI gene;Acc:426402]
80. NSG1 ENSGALG00000015010 5829 0.956 - - - - 0.956 - - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
81. ENSGALG00000026041 ENSGALG00000026041 13390 0.955 - - - - 0.955 - - - - -
82. SEC63 ENSGALG00000015308 11596 0.955 - - - - 0.955 - - - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
83. SMC3 ENSGALG00000008585 16618 0.954 - - - - 0.954 - - - - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
84. ESRP2 ENSGALG00000003374 4436 0.953 - - - - 0.953 - - - - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
85. PSMD14 ENSGALG00000011128 13335 0.947 - - - - 0.947 - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
86. ENSGALG00000000360 ENSGALG00000000360 15320 0.947 - - - - 0.947 - - - - -
87. SMNDC1 ENSGALG00000008561 14415 0.942 - - - - 0.942 - - - - - survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
88. ZEB1 ENSGALG00000007260 9277 0.939 - - - - 0.939 - - - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
89. RPS6 ENSGALG00000015082 307412 0.935 - - - - 0.935 - - - - - ribosomal protein S6 [Source:NCBI gene;Acc:396148]
90. EIF3H ENSGALG00000040522 39919 0.934 - - - - 0.934 - - - - - eukaryotic translation initiation factor 3 subunit H [Source:NCBI gene;Acc:420288]
91. ATP5C1 53961 0.932 - - - - 0.932 - - - - - ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X1
92. GPI ENSGALG00000004956 40030 0.918 - - - - 0.918 - - - - - glucose-6-phosphate isomerase [Source:NCBI gene;Acc:415783]
93. AHCY ENSGALG00000033677 35555 0.916 - - - - 0.916 - - - - - adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
94. RUNX1T1 ENSGALG00000033091 17529 0.913 - - - - 0.913 - - - - - RUNX1 translocation partner 1 [Source:NCBI gene;Acc:395503]
95. PAX-7 PAX-7 3856 0.911 - - - - 0.911 - - - - -
96. MARCKSL1 ENSGALG00000032335 88728 0.905 - - - - 0.905 - - - - - MARCKS like 1 [Source:NCBI gene;Acc:770764]
97. TIMM21 ENSGALG00000013709 3215 0.899 - - - - - - - 0.899 - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
98. XRN2 ENSGALG00000008372 22164 0.898 - - - - 0.898 - - - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
99. PPP4R2 ENSGALG00000007810 15127 0.896 - - - - - - 0.896 - - - protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
100. ENSGALG00000028938 ENSGALG00000028938 18616 0.885 - - - - - - 0.885 - - -

There are 490 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA