Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ABCD3

Gene Name Gene ID Reads Annotation
ABCD3 ENSGALG00000005647 4844 ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]











Genes with expression patterns similar to ABCD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ABCD3 ENSGALG00000005647 4844 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
2. IRAK2 ENSGALG00000008407 5934 0.991 - - - - - - 0.991 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
3. NDUFB8 ENSGALG00000005704 5781 0.988 - - - - - - 0.988 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
4. CLCN3 ENSGALG00000009674 3704 0.988 - - - - - - 0.988 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
5. PNO1 ENSGALG00000009093 11153 0.988 - - - - - - 0.988 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
6. RRN3 ENSGALG00000041989 3934 0.987 - - - - - - 0.987 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
7. AK6 ENSGALG00000020534 4791 0.987 - - - - - - 0.987 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
8. INTS10 ENSGALG00000010130 6320 0.986 - - - - - - 0.986 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
9. AP2B1 ENSGALG00000042125 13229 0.985 - - - - - - 0.985 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
10. MSRA ENSGALG00000028032 2607 0.985 - - - - - - 0.985 - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
11. AKAP7 ENSGALG00000029794 3287 0.985 - - - - - - 0.985 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
12. CAMKK2 ENSGALG00000040131 2795 0.984 - - - - - - 0.984 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
13. LEPROTL1 ENSGALG00000024482 4251 0.984 - - - - - - 0.984 - - - leptin receptor overlapping transcript-like 1
14. MED6 ENSGALG00000029743 9414 0.984 - - - - - - 0.984 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
15. KLHL29 ENSGALG00000016495 582 0.983 - - - - - - 0.983 - - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
16. DNAJA3 ENSGALG00000007821 3963 0.983 - - - - - - 0.983 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
17. BFAR ENSGALG00000003111 1778 0.983 - - - - - - 0.983 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
18. ARHGAP29 ENSGALG00000005683 3622 0.983 - - - - - - 0.983 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
19. CETN2 ENSGALG00000007510 1688 0.983 - - - - - - 0.983 - - - centrin 2 [Source:NCBI gene;Acc:422303]
20. POLR3E ENSGALG00000007008 4010 0.983 - - - - - - 0.983 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
21. MYST2 MYST2 8078 0.983 - - - - - - 0.983 - - -
22. SLC1A1 ENSGALG00000010187 637 0.983 - - - - - - 0.983 - - - solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
23. NPHP3 ENSGALG00000034586 1465 0.982 - - - - - - 0.982 - - - nephrocystin 3, transcript variant X1
24. POPDC3 ENSGALG00000027420 700 0.981 - - - - - - 0.981 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]
25. ATN1 ENSGALG00000014554 3270 0.981 - - - - - - 0.981 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
26. METTL11A METTL11A 11876 0.981 - - - - - - 0.981 - - -
27. LMNB2 ENSGALG00000000470 4364 0.981 - - - - - - 0.981 - - - lamin B2 [Source:NCBI gene;Acc:396222]
28. GCC2 ENSGALG00000016806 1085 0.981 - - - - - - 0.981 - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
29. HACE1 ENSGALG00000015415 1194 0.981 - - - - - - 0.981 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
30. ENSGALG00000002923 ENSGALG00000002923 2233 0.981 - - - - - - 0.981 - - -
31. SREBF2 ENSGALG00000041687 4519 0.98 - - - - - - 0.980 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]
32. RILPL2 ENSGALG00000003321 5632 0.98 - - - - - - 0.980 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
33. MOB2 ENSGALG00000030499 3658 0.98 - - - - - - 0.980 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
34. UBAC1 ENSGALG00000042564 598 0.98 - - - - - - 0.980 - - - UBA domain containing 1 [Source:NCBI gene;Acc:427754]
35. TBCCD1 ENSGALG00000006566 2696 0.98 - - - - - - 0.980 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
36. MTFMT ENSGALG00000007353 805 0.979 - - - - - - 0.979 - - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
37. RBBP6 ENSGALG00000006043 9708 0.979 - - - - - - 0.979 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
38. SDCCAG8 ENSGALG00000010713 311 0.979 - - - - - - 0.979 - - - serologically defined colon cancer antigen 8, transcript variant X5
39. BCAS1 ENSGALG00000007796 379 0.979 - - - - - - 0.979 - - - breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
40. LACTB2 ENSGALG00000038745 3460 0.978 - - - - - - 0.978 - - - lactamase beta 2 [Source:NCBI gene;Acc:420178]
41. EI24 ENSGALG00000038097 24081 0.978 - - - - - - 0.978 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
42. gga-mir-6643 ENSGALG00000027935 4442 0.978 - - - - - - 0.978 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
43. MAP1LC3A ENSGALG00000038721 2230 0.976 - - - - - - 0.976 - - - microtubule associated protein 1 light chain 3 alpha
44. KCTD9 ENSGALG00000000275 3455 0.976 - - - - - - 0.976 - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
45. DISP1 3281 0.976 - - - - - - 0.976 - - - dispatched RND transporter family member 1, transcript variant X3
46. ENSGALG00000027854 ENSGALG00000027854 5007 0.976 - - - - - - 0.976 - - -
47. SHQ1 ENSGALG00000007798 1982 0.976 - - - - - - 0.976 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
48. DNA2 ENSGALG00000004037 5426 0.976 - - - - - - 0.976 - - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
49. PPP3R1 ENSGALG00000023648 3417 0.976 - - - - - - 0.976 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
50. EIF4G3 ENSGALG00000010084 5881 0.975 - - - - - - 0.975 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
51. IMPACT ENSGALG00000015093 1334 0.975 - - - - - - 0.975 - - - impact RWD domain protein [Source:HGNC Symbol;Acc:HGNC:20387]
52. RBM12B ENSGALG00000035129 4314 0.974 - - - - - - 0.974 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
53. H2AFY_1 ENSGALG00000040141 4895 0.973 - - - - - - 0.973 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
54. THOC2 ENSGALG00000008507 9501 0.973 - - - - - - 0.973 - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
55. NCOA4 ENSGALG00000002066 10544 0.972 - - - - - - 0.972 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
56. ATE1 ENSGALG00000009502 3751 0.972 - - - - - - 0.972 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
57. TMEM108 ENSGALG00000036412 2903 0.971 - - - - - - 0.971 - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
58. E2F6 ENSGALG00000016454 4747 0.971 - - - - - - 0.971 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
59. ARID4A ENSGALG00000012037 8554 0.971 - - - - - - 0.971 - - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
60. OGFOD1 6926 0.97 - - - - - - 0.970 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
61. NDUFA9 ENSGALG00000017282 14358 0.97 - - - - - - 0.970 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
62. LATS2 4776 0.97 - - - - - - 0.970 - - - large tumor suppressor kinase 2
63. MOB1B ENSGALG00000011573 567 0.969 - - - - - - 0.969 - - - MOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]
64. YBX1 ENSGALG00000004848 20992 0.969 - - - - - - 0.969 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
65. SCRN1 ENSGALG00000011176 3783 0.969 - - - - - - 0.969 - - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
66. TM9SF3 ENSGALG00000005534 15290 0.969 - - - - - - 0.969 - - - transmembrane 9 superfamily member 3
67. PPIF ENSGALG00000004809 5586 0.965 - - - - - - 0.965 - - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
68. SEMA4B ENSGALG00000008297 11202 0.962 - - - - - - 0.962 - - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
69. SDF4 ENSGALG00000001872 6382 0.959 - - - - - - 0.959 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
70. BPTF ENSGALG00000038222 7521 0.958 - - - - - - 0.958 - - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
71. RPA1 ENSGALG00000003072 8023 0.957 - - - - - - 0.957 - - - replication protein A1 [Source:NCBI gene;Acc:417563]
72. CHMP7 ENSGALG00000000409 8967 0.955 - - - - - - 0.955 - - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
73. MRE11A MRE11A 5754 0.955 - - - - - - 0.955 - - -
74. POLA1 ENSGALG00000016312 9440 0.953 - - - - - - 0.953 - - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
75. PRCP ENSGALG00000037521 4012 0.951 - - - - - - 0.951 - - - prolylcarboxypeptidase [Source:HGNC Symbol;Acc:HGNC:9344]
76. UBA3 ENSGALG00000013410 6923 0.951 - - - - - - 0.951 - - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
77. ARNT2 ENSGALG00000006445 7050 0.951 - - - - - - 0.951 - - - aryl hydrocarbon receptor nuclear translocator 2 [Source:HGNC Symbol;Acc:HGNC:16876]
78. XRN1 ENSGALG00000002706 4014 0.95 - - - - - - 0.950 - - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
79. SOD2 ENSGALG00000011661 13178 0.95 - - - - - - 0.950 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
80. SLC25A14 ENSGALG00000004063 5574 0.95 - - - - - - 0.950 - - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
81. MED7 ENSGALG00000003870 4244 0.946 - - - - - - 0.946 - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
82. CCND1 ENSGALG00000007555 6715 0.945 - - - - - - 0.945 - - - cyclin D1 [Source:NCBI gene;Acc:396341]
83. GFM1 ENSGALG00000009634 7213 0.944 - - - - - - 0.944 - - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
84. POR ENSGALG00000002053 5223 0.943 - - - - - - 0.943 - - - cytochrome p450 oxidoreductase [Source:NCBI gene;Acc:417520]
85. ZMYND11 ENSGALG00000006599 5740 0.942 - - - - - - 0.942 - - - zinc finger MYND-type containing 11 [Source:HGNC Symbol;Acc:HGNC:16966]
86. BTAF1 ENSGALG00000030598 3556 0.942 - - - - - - 0.942 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
87. SIRT1 ENSGALG00000002761 9028 0.941 - - - - - - 0.941 - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
88. GCLM ENSGALG00000005782 15789 0.939 - - - - - - 0.939 - - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
89. RGCC ENSGALG00000016954 1282 0.938 - - - - - - 0.938 - - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
90. MFGE8 ENSGALG00000006702 6976 0.936 - - - - - - 0.936 - - - milk fat globule-EGF factor 8 protein [Source:NCBI gene;Acc:415494]
91. PSMG3 ENSGALG00000004203 11240 0.933 - - - - - - 0.933 - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
92. ALDH4A1 ENSGALG00000042184 9432 0.932 - - - - - - 0.932 - - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
93. TRAM1 ENSGALG00000041112 22876 0.931 - - - - - - 0.931 - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
94. PMM2 ENSGALG00000007326 8260 0.93 - - - - - - 0.930 - - - phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
95. HDGFL3 ENSGALG00000006036 13576 0.927 - - - - - - 0.927 - - - HDGF like 3 [Source:HGNC Symbol;Acc:HGNC:24937]
96. CCDC58 ENSGALG00000014413 9022 0.927 - - - - - - 0.927 - - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
97. LARP1 ENSGALG00000040109 14808 0.925 - - - - - - 0.925 - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
98. KIF15 ENSGALG00000036645 9946 0.924 - - - - - - 0.924 - - - kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]
99. FGD3 ENSGALG00000005237 4410 0.921 - - - - - - 0.921 - - - FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16027]
100. XPA ENSGALG00000028998 8621 0.92 - - - - - - 0.920 - - - XPA, DNA damage recognition and repair factor [Source:NCBI gene;Acc:395659]

There are 144 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA