Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ABCB11

Gene Name Gene ID Reads Annotation
ABCB11 ENSGALG00000010891 24 ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]











Genes with expression patterns similar to ABCB11

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ABCB11 ENSGALG00000010891 24 6 - - 1.000 1.000 1.000 1.000 - 1.000 - 1.000 ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]
2. SMAD9 ENSGALG00000017050 11 1.807 - - - 0.829 - - - 0.978 - - SMAD family member 9 [Source:NCBI gene;Acc:395543]
3. SEC16A ENSGALG00000002364 19 1.7 - - 0.700 - 1.000 - - - - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X1
4. ENSGALG00000011273 ENSGALG00000011273 9 1.673 - - - 0.883 - - - 0.790 - -
5. RHOJ ENSGALG00000011855 17 1.61 - - 0.727 0.883 - - - - - - ras homolog family member J [Source:NCBI gene;Acc:423513]
6. LRRC49 ENSGALG00000004059 29 1.52 - - 0.775 - 0.745 - - - - - leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
7. CNGA1 ENSGALG00000014136 1 1 - - - - 1.000 - - - - - cyclic nucleotide gated channel alpha 1 [Source:NCBI gene;Acc:396143]
8. HAPLN4 ENSGALG00000026563 9 1 - - - - 1.000 - - - - - hyaluronan and proteoglycan link protein 4 [Source:HGNC Symbol;Acc:HGNC:31357]
9. gga-mir-1801 ENSGALG00000025241 13 1 - - - - 1.000 - - - - - gga-mir-1801 [Source:miRBase;Acc:MI0007545]
10. SPARCL1 ENSGALG00000010929 10 1 - - - - 1.000 - - - - - SPARC like 1 [Source:HGNC Symbol;Acc:HGNC:11220]
11. ENSGALG00000014502 ENSGALG00000014502 2 1 - - - - 1.000 - - - - -
12. VPS51 ENSGALG00000004166 204 1 - - - - 1.000 - - - - - VPS51, GARP complex subunit [Source:NCBI gene;Acc:422984]
13. GBF1 ENSGALG00000005637 32 1 - - - - 1.000 - - - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:4181]
14. PTPRC ENSGALG00000002192 10 1 - - - - 1.000 - - - - - protein tyrosine phosphatase, receptor type C [Source:NCBI gene;Acc:386580]
15. KCNRG ENSGALG00000017012 4 1 - - - - 1.000 - - - - - potassium channel regulator [Source:HGNC Symbol;Acc:HGNC:18893]
16. SI ENSGALG00000009511 5 1 - - - - 1.000 - - - - - sucrase-isomaltase
17. MOV10L1 ENSGALG00000033664 2 1 - - - - 1.000 - - - - - Mov10 like RISC complex RNA helicase 1 [Source:HGNC Symbol;Acc:HGNC:7201]
18. ARL6 ENSGALG00000019215 11 1 - - - - 1.000 - - - - - ADP ribosylation factor like GTPase 6 [Source:NCBI gene;Acc:418433]
19. DMB1 ENSGALG00000000162 7 1 - - - - 1.000 - - - - - major histocompatibility complex, class II, DM beta 1 [Source:NCBI gene;Acc:106182184]
20. GAREM GAREM 16 1 - - - - 1.000 - - - - -
21. ABCG1 ENSGALG00000016164 10 1 - - - - 1.000 - - - - - ATP binding cassette subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:73]
22. CNKSR3 ENSGALG00000027159 41 1 - - - - 1.000 - - - - - CNKSR family member 3, transcript variant X2
23. HEG1 ENSGALG00000011813 6 1 - - - - 1.000 - - - - - heart development protein with EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:29227]
24. CILP ENSGALG00000007358 20 1 - - - - 1.000 - - - - - cartilage intermediate layer protein [Source:HGNC Symbol;Acc:HGNC:1980]
25. C18orf32 ENSGALG00000042000 114 1 - - - - 1.000 - - - - - chromosome 18 open reading frame 32 [Source:HGNC Symbol;Acc:HGNC:31690]
26. E2F3 ENSGALG00000012680 21 1 - - - - 1.000 - - - - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
27. GRB10 ENSGALG00000013100 37 1 - - - - 1.000 - - - - - growth factor receptor bound protein 10 [Source:NCBI gene;Acc:420948]
28. PLA2G1BL ENSGALG00000007236 4 1 - - - - 1.000 - - - - - phospholipase A2, major isoenzyme-like
29. B3GNTL1 ENSGALG00000001433 22 1 - - - - 1.000 - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
30. BMPR1A ENSGALG00000002003 20 1 - - - - 1.000 - - - - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
31. LRRK1 LRRK1 35 1 - - - - 1.000 - - - - -
32. SLC25A42 ENSGALG00000002621 6 1 - - - - 1.000 - - - - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
33. METTL24 ENSGALG00000041120 60 1 - - - - 1.000 - - - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
34. MCF2 ENSGALG00000006562 59 0.996 - - - - - - - 0.996 - - MCF.2 cell line derived transforming sequence [Source:HGNC Symbol;Acc:HGNC:6940]
35. MLNR ENSGALG00000017003 10 0.98 - - - - - - - 0.980 - - motilin receptor [Source:NCBI gene;Acc:428072]
36. CCDC39 ENSGALG00000021855 23 0.98 - - - - - - - 0.980 - - coiled-coil domain containing 39
37. ATP6V1A ENSGALG00000014800 4 0.98 - - - - - - - 0.980 - - ATPase H+ transporting V1 subunit A [Source:NCBI gene;Acc:395821]
38. C9orf152 C9orf152 3 0.98 - - - - - - - 0.980 - -
39. CHFR ENSGALG00000002180 17 0.978 - - - - - - - 0.978 - - checkpoint with forkhead and ring finger domains [Source:HGNC Symbol;Acc:HGNC:20455]
40. ADRA2C ENSGALG00000015608 42 0.978 - - - - - - - 0.978 - - adrenoceptor alpha 2C [Source:HGNC Symbol;Acc:HGNC:283]
41. C9ORF9 C9ORF9 13 0.962 - - - - - - - 0.962 - -
42. NMRK2 ENSGALG00000025751 57 0.953 - - - - - - - 0.953 - - nicotinamide riboside kinase 2 [Source:HGNC Symbol;Acc:HGNC:17871]
43. CCDC147 CCDC147 53 0.948 - - - - - - - 0.948 - -
44. CHRM2 ENSGALG00000012894 21 0.948 - - - - - - - 0.948 - - cholinergic receptor muscarinic 2 [Source:NCBI gene;Acc:418126]
45. RAMP1 ENSGALG00000003821 389 0.944 - - - - - - - 0.944 - - receptor activity modifying protein 1 [Source:HGNC Symbol;Acc:HGNC:9843]
46. TRPA1 ENSGALG00000034751 148 0.944 - - - - - - - 0.944 - - Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318460]
47. TICRR ENSGALG00000006631 495 0.938 - - - - - - - 0.938 - - TOPBP1 interacting checkpoint and replication regulator [Source:NCBI gene;Acc:415489]
48. LNP1 ENSGALG00000015287 14 0.929 - - 0.929 - - - - - - - leukemia NUP98 fusion partner 1 [Source:HGNC Symbol;Acc:HGNC:28014]
49. CHADL ENSGALG00000011970 42 0.928 - - - - - - - 0.928 - - chondroadherin-like [Source:NCBI gene;Acc:417998]
50. C4orf48 C4orf48 255 0.926 - - - - - - - 0.926 - -
51. PDPR ENSGALG00000002690 45 0.924 - - - - - - - 0.924 - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:HGNC:30264]
52. CPAMD8 ENSGALG00000003742 151 0.919 - - - - - - - 0.919 - - C3 and PZP like, alpha-2-macroglobulin domain containing 8, transcript variant X3
53. CRAT ENSGALG00000037443 78 0.916 - - - - - - - 0.916 - - carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
54. ASTE1 ENSGALG00000036171 155 0.916 - - - - - - - 0.916 - - asteroid homolog 1 (Drosophila), transcript variant X3
55. LAMP1 ENSGALG00000037697 247 0.911 - - - - - - - 0.911 - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
56. TSPAN14 ENSGALG00000002414 69 0.911 - - - - - - - 0.911 - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
57. LSM11 ENSGALG00000038954 16 0.908 - - - - 0.908 - - - - - LSM11, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:30860]
58. SGIP1 ENSGALG00000011113 20 0.908 - - - - - - - 0.908 - - SH3 domain GRB2 like endophilin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:25412]
59. ENSGALG00000019896 ENSGALG00000019896 3 0.906 - - - - - - - 0.906 - -
60. ANKRD33B ENSGALG00000038328 22 0.905 - - - - 0.905 - - - - - ankyrin repeat domain 33B [Source:HGNC Symbol;Acc:HGNC:35240]
61. HPCAL4 ENSGALG00000003829 75 0.885 - - - - - - - 0.885 - - hippocalcin like 4 [Source:HGNC Symbol;Acc:HGNC:18212]
62. CROCC 5 0.883 - - - 0.883 - - - - - - ciliary rootlet coiled-coil, rootletin, transcript variant X6
63. RNaseP RNaseP 30 0.883 - - - 0.883 - - - - - -
64. SOWAHA ENSGALG00000040802 2 0.883 - - - 0.883 - - - - - - sosondowah ankyrin repeat domain family member A [Source:HGNC Symbol;Acc:HGNC:27033]
65. IL10R1 IL10R1 9 0.883 - - - 0.883 - - - - - -
66. MRC2 ENSGALG00000000461 48 0.883 - - - 0.883 - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
67. ENSGALG00000021824 ENSGALG00000021824 6 0.883 - - - 0.883 - - - - - -
68. LPGAT1 ENSGALG00000009848 33 0.883 - - - 0.883 - - - - - - lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
69. TRHDE ENSGALG00000010200 4 0.883 - - - 0.883 - - - - - - thyrotropin releasing hormone degrading enzyme [Source:HGNC Symbol;Acc:HGNC:30748]
70. SH3PXD2B ENSGALG00000002831 7 0.883 - - - 0.883 - - - - - - SH3 and PX domains 2B [Source:HGNC Symbol;Acc:HGNC:29242]
71. ENSGALG00000001629 ENSGALG00000001629 31 0.881 - - - - - - - 0.881 - -
72. MAPKAPK3 ENSGALG00000002283 30 0.878 - - - - - - - 0.878 - - Gallus gallus mitogen-activated protein kinase-activated protein kinase 3 (MAPKAPK3), mRNA. [Source:RefSeq mRNA;Acc:NM_001321558]
73. PCNXL4 PCNXL4 58 0.876 - - - - - - - 0.876 - -
74. DAPK1 ENSGALG00000012608 17 0.875 - - - - - - - 0.875 - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
75. ENSGALG00000017013 ENSGALG00000017013 286 0.869 - - - - - - - 0.869 - -
76. WARS ENSGALG00000011228 193 0.859 - - - - - - - 0.859 - - tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
77. LOC418667 ENSGALG00000019147 4 0.858 - - - 0.858 - - - - - - granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like
78. ADPGK ENSGALG00000001788 208 0.852 - - - - - - - 0.852 - - ADP dependent glucokinase [Source:NCBI gene;Acc:415317]
79. STEAP1 ENSGALG00000009006 16 0.851 - - - - - - - 0.851 - - STEAP family member 1
80. MGAT3 ENSGALG00000036743 5 0.844 - - - 0.844 - - - - - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
81. U4atac U4atac 23 0.841 - - 0.841 - - - - - - -
82. MASP2 ENSGALG00000003016 35 0.841 - - - - - - - 0.841 - - mannan binding lectin serine peptidase 2 [Source:NCBI gene;Acc:407089]
83. RFX8 ENSGALG00000045388 17 0.84 - - - 0.840 - - - - - - RFX family member 8, lacking RFX DNA binding domain [Source:HGNC Symbol;Acc:HGNC:37253]
84. ARSG ENSGALG00000004193 21 0.839 - - 0.839 - - - - - - - arylsulfatase G [Source:NCBI gene;Acc:771433]
85. BATF ENSGALG00000010323 96 0.835 - - - - - - - 0.835 - - basic leucine zipper ATF-like transcription factor [Source:HGNC Symbol;Acc:HGNC:958]
86. SDSL ENSGALG00000008317 55 0.832 - - - - - - - 0.832 - - serine dehydratase like [Source:NCBI gene;Acc:417030]
87. CASP18 ENSGALG00000008346 23 0.831 - - - - - - - 0.831 - - initiator caspase [Source:NCBI gene;Acc:693266]
88. NEU2 ENSGALG00000037467 34 0.827 - - - - - - - 0.827 - - neuraminidase 2 [Source:HGNC Symbol;Acc:HGNC:7759]
89. CCDC122 ENSGALG00000016968 5 0.823 - - - 0.823 - - - - - - coiled-coil domain containing 122 [Source:HGNC Symbol;Acc:HGNC:26478]
90. RANBP17 47 0.822 - - - - - - - 0.822 - - RAN binding protein 17
91. LHFPL2 ENSGALG00000004437 500 0.815 - - - - 0.815 - - - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
92. NETO1 ENSGALG00000041184 3 0.81 - - - 0.810 - - - - - - neuropilin and tolloid like 1 [Source:HGNC Symbol;Acc:HGNC:13823]
93. TRAF3IP3 ENSGALG00000001373 11 0.81 - - - 0.810 - - - - - - TRAF3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:30766]
94. SLC7A10 ENSGALG00000004729 13 0.804 - - - 0.804 - - - - - - solute carrier family 7 member 10 [Source:HGNC Symbol;Acc:HGNC:11058]
95. THAP1 ENSGALG00000015385 15 0.802 - - - 0.802 - - - - - - THAP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20856]
96. FGG ENSGALG00000009268 418 0.797 - - - - 0.797 - - - - - fibrinogen gamma chain [Source:NCBI gene;Acc:395837]
97. PPHLN1 ENSGALG00000009547 30 0.793 - - 0.793 - - - - - - - periphilin 1 [Source:NCBI gene;Acc:417792]
98. KDELC2 ENSGALG00000017158 479 0.79 - - - - - 0.790 - - - - KDEL motif containing 2 [Source:HGNC Symbol;Acc:HGNC:28496]
99. SYCP1 ENSGALG00000002511 13 0.79 - - 0.790 - - - - - - - synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]
100. PYGO2 681 0.788 - - - 0.788 - - - - - - pygopus family PHD finger 2

There are 93 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA