Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ABCA1

Gene Name Gene ID Reads Annotation
ABCA1 ENSGALG00000015433 11 ATP-binding cassette, sub-family A (ABC1), member 1 [Source:NCBI gene;Acc:373945]











Genes with expression patterns similar to ABCA1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ABCA1 ENSGALG00000015433 11 5 - - 1.000 1.000 1.000 1.000 - - - 1.000 ATP-binding cassette, sub-family A (ABC1), member 1 [Source:NCBI gene;Acc:373945]
2. SMURF1 ENSGALG00000004655 4 1 - - - 1.000 - - - - - - SMAD specific E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:16807]
3. DCUN1D3 ENSGALG00000002267 6 1 - - - 1.000 - - - - - - defective in cullin neddylation 1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28734]
4. FAM126B ENSGALG00000020869 19 1 - - - - 1.000 - - - - - family with sequence similarity 126 member B [Source:HGNC Symbol;Acc:HGNC:28593]
5. GRIN1 ENSGALG00000008898 18 1 - - - 1.000 - - - - - - glutamate ionotropic receptor NMDA type subunit 1 [Source:NCBI gene;Acc:404296]
6. ARHGAP22 ENSGALG00000006137 4 1 - - - - 1.000 - - - - - Rho GTPase activating protein 22, transcript variant X3
7. SULT1B ENSGALG00000023122 7 1 - - - - 1.000 - - - - - sulfotransferase family, cytosolic, 1B [Source:NCBI gene;Acc:422661]
8. MYLK2 ENSGALG00000006273 5 1 - - - 1.000 - - - - - - myosin light chain kinase 2 [Source:NCBI gene;Acc:396356]
9. OCSTAMP ENSGALG00000044719 10 1 - - - 1.000 - - - - - - osteoclast stimulatory transmembrane protein [Source:HGNC Symbol;Acc:HGNC:16116]
10. SPOCK3 ENSGALG00000009568 33 1 - - - - 1.000 - - - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
11. VANGL2 ENSGALG00000030643 3 1 - - - 1.000 - - - - - - VANGL planar cell polarity protein 2 [Source:HGNC Symbol;Acc:HGNC:15511]
12. ENSGALG00000027026 ENSGALG00000027026 3 1 - - - 1.000 - - - - - -
13. ENSGALG00000008599 ENSGALG00000008599 2 1 - - - - 1.000 - - - - -
14. ZIC4 ENSGALG00000006810 2 1 - - - 1.000 - - - - - - Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
15. ENSGALG00000023694 ENSGALG00000023694 45 1 - - - 1.000 - - - - - -
16. FBXL22 ENSGALG00000003401 1 1 - - - 1.000 - - - - - - F-box and leucine rich repeat protein 22 [Source:HGNC Symbol;Acc:HGNC:27537]
17. SLC14A2 SLC14A2 4 1 - - - 1.000 - - - - - -
18. C2orf50 ENSGALG00000046449 17 1 - - - 1.000 - - - - - - chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
19. PNPLA2 ENSGALG00000014569 7 1 - - - - 1.000 - - - - - patatin like phospholipase domain containing 2 [Source:NCBI gene;Acc:431066]
20. NT5E ENSGALG00000015833 5 1 - - - 1.000 - - - - - - 5'-nucleotidase ecto
21. RNF19A ENSGALG00000038772 380 1 - - - - 1.000 - - - - - ring finger protein 19A, RBR E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13432]
22. CCDC152 CCDC152 28 1 - - - 1.000 - - - - - -
23. RNF182 ENSGALG00000012700 4 1 - - - 1.000 - - - - - - ring finger protein 182 [Source:HGNC Symbol;Acc:HGNC:28522]
24. PEAK1 ENSGALG00000002759 39 1 - - - - 1.000 - - - - - pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
25. CACNB2 ENSGALG00000008591 53 1 - - - 1.000 - - - - - - calcium voltage-gated channel auxiliary subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:1402]
26. GTPBP6 ENSGALG00000016717 17 1 - - - 1.000 - - - - - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
27. RBMS3 ENSGALG00000011439 25 1 - - - 1.000 - - - - - - RNA binding motif single stranded interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:13427]
28. AJAP1 ENSGALG00000027265 11 1 - - - 1.000 - - - - - - adherens junctions associated protein 1 [Source:HGNC Symbol;Acc:HGNC:30801]
29. ABCG5 ENSGALG00000009955 4 1 - - - - 1.000 - - - - - ATP binding cassette subfamily G member 5 [Source:HGNC Symbol;Acc:HGNC:13886]
30. ENSGALG00000027104 ENSGALG00000027104 93 1 - - - - 1.000 - - - - -
31. CACNG3 ENSGALG00000038087 12 1 - - - - 1.000 - - - - - calcium voltage-gated channel auxiliary subunit gamma 3 [Source:NCBI gene;Acc:395378]
32. CSF2RA ENSGALG00000016693 5 1 - - - 1.000 - - - - - - colony stimulating factor 2 receptor alpha subunit [Source:NCBI gene;Acc:418666]
33. RD RD 99 1 - - - 1.000 - - - - - -
34. TOR1AIP2 ENSGALG00000004017 2 1 - - - - - 1.000 - - - - torsin 1A interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:24055]
35. ENSGALG00000001345 ENSGALG00000001345 5 1 - - - - 1.000 - - - - -
36. SPATA1 ENSGALG00000008784 4 1 - - - - 1.000 - - - - - spermatogenesis associated 1 [Source:HGNC Symbol;Acc:HGNC:14682]
37. SLC25A29 ENSGALG00000011220 17 0.992 - - - - - 0.992 - - - - solute carrier family 25 member 29 [Source:HGNC Symbol;Acc:HGNC:20116]
38. CCR8 ENSGALG00000038069 6 0.958 - - - - - 0.958 - - - - C-C motif chemokine receptor 8 [Source:NCBI gene;Acc:420718]
39. ICK ENSGALG00000016321 19 0.958 - - - - - 0.958 - - - - intestinal cell kinase [Source:HGNC Symbol;Acc:HGNC:21219]
40. ESYT3 ENSGALG00000012092 13 0.958 - - - - - 0.958 - - - - extended synaptotagmin 3 [Source:HGNC Symbol;Acc:HGNC:24295]
41. USH2A ENSGALG00000009652 2 0.958 - - - - - 0.958 - - - - usherin, transcript variant X3
42. MFNG ENSGALG00000012442 5 0.958 - - - - - 0.958 - - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:7038]
43. GALNTL6 ENSGALG00000030588 3 0.958 - - - - - 0.958 - - - - polypeptide N-acetylgalactosaminyltransferase-like 6
44. PDC ENSGALG00000030417 4 0.958 - - - - - 0.958 - - - - phosducin [Source:HGNC Symbol;Acc:HGNC:8759]
45. LRCH3 ENSGALG00000007595 21 0.958 - - - - - 0.958 - - - - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
46. KREMEN1 ENSGALG00000005808 5 0.958 - - - - - 0.958 - - - - kringle containing transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:17550]
47. ATP1B4 ENSGALG00000008593 39 0.958 - - - - - 0.958 - - - - ATPase Na+/K+ transporting family member beta 4 [Source:NCBI gene;Acc:422365]
48. ENSGALG00000028527 ENSGALG00000028527 1 0.958 - - - - - 0.958 - - - -
49. KCNK10 ENSGALG00000010598 7 0.958 - - - - - 0.958 - - - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
50. ZMAT3 ENSGALG00000040948 4 0.958 - - - - - 0.958 - - - - zinc finger matrin-type 3 [Source:HGNC Symbol;Acc:HGNC:29983]
51. GRPR ENSGALG00000027960 22 0.941 - - - - 0.941 - - - - - gastrin releasing peptide receptor [Source:NCBI gene;Acc:378928]
52. LEKR1 50 0.936 - - - - 0.936 - - - - - leucine, glutamate and lysine rich 1, transcript variant X17
53. OTC ENSGALG00000016254 6 0.936 - - - - 0.936 - - - - - ornithine carbamoyltransferase [Source:NCBI gene;Acc:395735]
54. CLVS2 ENSGALG00000014853 22 0.928 - - - - 0.928 - - - - - clavesin 2 [Source:HGNC Symbol;Acc:HGNC:23046]
55. NDEL1 ENSGALG00000001163 16 0.926 - - - - - 0.926 - - - - Gallus gallus nudE neurodevelopment protein 1-like 1 (NDEL1), mRNA. [Source:RefSeq mRNA;Acc:NM_001030696]
56. RASD1 ENSGALG00000004860 133 0.923 - - - 0.923 - - - - - - ras related dexamethasone induced 1 [Source:NCBI gene;Acc:416507]
57. SEZ6L ENSGALG00000032415 56 0.923 - - - 0.923 - - - - - - seizure related 6 homolog like [Source:HGNC Symbol;Acc:HGNC:10763]
58. OGDHL ENSGALG00000002266 57 0.919 - - - - - 0.919 - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
59. KCNS2 ENSGALG00000043764 9 0.914 - - - 0.914 - - - - - - potassium voltage-gated channel modifier subfamily S member 2 [Source:HGNC Symbol;Acc:HGNC:6301]
60. RS1 ENSGALG00000016523 11 0.909 - - - - - 0.909 - - - - retinoschisin 1 [Source:NCBI gene;Acc:772315]
61. gga-mir-30d ENSGALG00000018290 9 0.909 - - - - - 0.909 - - - - gga-mir-30d [Source:miRBase;Acc:MI0001198]
62. THSD4 ENSGALG00000004087 12 0.909 - - - - - 0.909 - - - - thrombospondin type 1 domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25835]
63. LRRTM3 ENSGALG00000002864 29 0.909 - - - - - 0.909 - - - - leucine rich repeat transmembrane neuronal 3 [Source:NCBI gene;Acc:423649]
64. PALM ENSGALG00000026055 8 0.904 - - - 0.904 - - - - - - paralemmin [Source:NCBI gene;Acc:101750199]
65. FCHSD2 ENSGALG00000017329 3190 0.897 - - - - - 0.897 - - - - FCH and double SH3 domains 2 [Source:HGNC Symbol;Acc:HGNC:29114]
66. HOPX ENSGALG00000011404 10 0.897 - - - 0.897 - - - - - - HOP homeobox [Source:NCBI gene;Acc:395241]
67. ATRN ENSGALG00000016034 16 0.895 - - - - 0.895 - - - - - attractin [Source:HGNC Symbol;Acc:HGNC:885]
68. LMLN ENSGALG00000012067 15 0.895 - - - - 0.895 - - - - - leishmanolysin like peptidase [Source:HGNC Symbol;Acc:HGNC:15991]
69. MICAL2 ENSGALG00000005540 25 0.895 - - - - 0.895 - - - - - microtubule associated monooxygenase, calponin and LIM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24693]
70. UBE4B ENSGALG00000002649 39 0.887 - - - - - 0.887 - - - - ubiquitination factor E4B [Source:HGNC Symbol;Acc:HGNC:12500]
71. ENSGALG00000015888 ENSGALG00000015888 12 0.881 - - - - - 0.881 - - - -
72. PLEKHG4 ENSGALG00000023898 65 0.876 - - - - - 0.876 - - - - pleckstrin homology and RhoGEF domain containing G4 [Source:HGNC Symbol;Acc:HGNC:24501]
73. LRRC49 ENSGALG00000004059 29 0.871 - - - - - 0.871 - - - - leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
74. NDFIP2 ENSGALG00000016909 25 0.871 - - - - - 0.871 - - - - Nedd4 family interacting protein 2 [Source:NCBI gene;Acc:418803]
75. LRTM2 ENSGALG00000026214 160 0.869 - - - - - 0.869 - - - - leucine rich repeats and transmembrane domains 2 [Source:HGNC Symbol;Acc:HGNC:32443]
76. C17H9ORF7 C17H9ORF7 71 0.865 - - - - - 0.865 - - - -
77. TRPV2 ENSGALG00000004519 7 0.86 - - - 0.860 - - - - - - transient receptor potential cation channel subfamily V member 2 [Source:HGNC Symbol;Acc:HGNC:18082]
78. RQCD1 RQCD1 110 0.859 - - - 0.859 - - - - - -
79. RORALPHA1 RORALPHA1 119 0.856 - - - - - 0.856 - - - -
80. MAPK14 ENSGALG00000042833 13 0.854 - - - - - 0.854 - - - - mitogen-activated protein kinase 14 [Source:HGNC Symbol;Acc:HGNC:6876]
81. GLRA2 ENSGALG00000016571 10 0.844 - - - 0.844 - - - - - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
82. WTIP ENSGALG00000025864 75 0.842 - - - - - 0.842 - - - - WT1 interacting protein [Source:HGNC Symbol;Acc:HGNC:20964]
83. ENSGALG00000028038 ENSGALG00000028038 9 0.837 - - - - - 0.837 - - - -
84. PRSS35 ENSGALG00000015847 52 0.837 - - - - - 0.837 - - - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
85. ENSGALG00000001919 ENSGALG00000001919 531 0.833 - - - - - 0.833 - - - -
86. P2RX5 ENSGALG00000004613 31 0.825 - - - - - 0.825 - - - - purinergic receptor P2X 5 [Source:NCBI gene;Acc:395507]
87. ITGBL1 ENSGALG00000016867 36 0.82 - - - 0.820 - - - - - - integrin subunit beta like 1 [Source:HGNC Symbol;Acc:HGNC:6164]
88. DENND6B ENSGALG00000043771 22 0.82 - - - - - 0.820 - - - - DENN domain containing 6B [Source:HGNC Symbol;Acc:HGNC:32690]
89. TNNT2 ENSGALG00000000302 568 0.816 - - - - - 0.816 - - - - troponin T2, cardiac type [Source:NCBI gene;Acc:396433]
90. SLC32A1 ENSGALG00000038919 61 0.815 - - - - - 0.815 - - - - solute carrier family 32 member 1 [Source:HGNC Symbol;Acc:HGNC:11018]
91. PWP2 60 0.812 - - - - - 0.812 - - - - PWP2, small subunit processome component
92. ARMC9 ENSGALG00000007691 40 0.812 - - - - 0.812 - - - - - armadillo repeat containing 9 [Source:HGNC Symbol;Acc:HGNC:20730]
93. XYLB ENSGALG00000006173 23 0.812 - - - - - 0.812 - - - - xylulokinase [Source:HGNC Symbol;Acc:HGNC:12839]
94. IGFBP1 ENSGALG00000043493 68 0.808 - - 0.808 - - - - - - - insulin like growth factor binding protein 1 [Source:NCBI gene;Acc:408027]
95. SLC35F4 ENSGALG00000012094 30 0.805 - - - - - 0.805 - - - - solute carrier family 35 member F4 [Source:HGNC Symbol;Acc:HGNC:19845]
96. SPERT ENSGALG00000016981 145 0.803 - - 0.803 - - - - - - - spermatid associated [Source:NCBI gene;Acc:418848]
97. TSKU ENSGALG00000000761 10 0.798 - - - - - 0.798 - - - - tsukushi, small leucine rich proteoglycan [Source:NCBI gene;Acc:419088]
98. TXNRD1 ENSGALG00000035345 4784 0.798 - - - - - 0.798 - - - - Gallus gallus thioredoxin reductase 1 (TXNRD1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352023]
99. GABRA5 ENSGALG00000016744 12 0.795 - - - - 0.795 - - - - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
100. TNNI2 ENSGALG00000006591 690 0.787 - - - - - 0.787 - - - - troponin I2, fast skeletal type [Source:NCBI gene;Acc:396386]

There are 57 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA