Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ABAT

Gene Name Gene ID Reads Annotation
ABAT ENSGALG00000007334 28 4-aminobutyrate aminotransferase [Source:HGNC Symbol;Acc:HGNC:23]











Genes with expression patterns similar to ABAT

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ABAT ENSGALG00000007334 28 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 4-aminobutyrate aminotransferase [Source:HGNC Symbol;Acc:HGNC:23]
2. MEGF9 3 1.705 - - 1.000 - - 0.705 - - - - multiple EGF-like-domains 9
3. IKZF1 ENSGALG00000013086 58 1.647 - - - - - - 0.843 - - 0.804 IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
4. COL4A3BP ENSGALG00000014952 96 1.561 - - - - - - 0.855 0.706 - - collagen type IV alpha 3 binding protein [Source:HGNC Symbol;Acc:HGNC:2205]
5. GPRC5B ENSGALG00000002028 28 1.516 - - - - 0.763 - 0.753 - - - G protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]
6. PLXNC1 ENSGALG00000011309 69 1.495 - - - - - - 0.787 - - 0.708 plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]
7. MYH1G ENSGALG00000028612 7 1.49 - - - 0.729 - - - - - 0.761 Gallus gallus myosin, heavy chain 1G, skeletal muscle (MYH1G), mRNA. [Source:RefSeq mRNA;Acc:NM_001319016]
8. EREG ENSGALG00000010864 46 1 - - 1.000 - - - - - - - epiregulin [Source:NCBI gene;Acc:408036]
9. GLIPR1L ENSGALG00000010224 1 1 - - 1.000 - - - - - - - GLI pathogenesis-related 1-like [Source:NCBI gene;Acc:417862]
10. NMUR1 ENSGALG00000007714 32 1 - - 1.000 - - - - - - - Gallus gallus neuromedin U receptor 1 (NMUR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318436]
11. NSUN7 ENSGALG00000014264 4 1 - - 1.000 - - - - - - - NOP2/Sun RNA methyltransferase family member 7 [Source:HGNC Symbol;Acc:HGNC:25857]
12. SETDB1 ENSGALG00000024051 1 1 - - 1.000 - - - - - - - SET domain bifurcated 1 [Source:HGNC Symbol;Acc:HGNC:10761]
13. ENSGALG00000019896 ENSGALG00000019896 3 1 - - 1.000 - - - - - - -
14. GLP2R ENSGALG00000041800 10 1 - - 1.000 - - - - - - - glucagon-like peptide 2 receptor [Source:NCBI gene;Acc:427787]
15. KK34 ENSGALG00000037851 21 1 - - 1.000 - - - - - - - interleukin-like [Source:NCBI gene;Acc:407087]
16. ENSGALG00000008047 ENSGALG00000008047 13 1 - - 1.000 - - - - - - -
17. PANX1 ENSGALG00000039751 70 1 - - 1.000 - - - - - - - pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]
18. HEPACAM2 ENSGALG00000009482 3 1 - - 1.000 - - - - - - - HEPACAM family member 2 [Source:HGNC Symbol;Acc:HGNC:27364]
19. MAL2 ENSGALG00000040768 75 1 - - 1.000 - - - - - - - mal, T cell differentiation protein 2 [Source:NCBI gene;Acc:420280]
20. ENSGALG00000028124 ENSGALG00000028124 1 1 - - 1.000 - - - - - - -
21. ENSGALG00000006053 ENSGALG00000006053 1 1 - - 1.000 - - - - - - -
22. LRRC63 8 1 - - 1.000 - - - - - - - leucine rich repeat containing 63, transcript variant X3
23. MNOC MNOC 1 1 - - 1.000 - - - - - - -
24. LEPR ENSGALG00000011058 4 1 - - 1.000 - - - - - - - leptin receptor [Source:NCBI gene;Acc:374223]
25. FAM13C ENSGALG00000031305 1 1 - - 1.000 - - - - - - - family with sequence similarity 13 member C [Source:HGNC Symbol;Acc:HGNC:19371]
26. CLCN4 ENSGALG00000016607 8 1 - - 1.000 - - - - - - - chloride voltage-gated channel 4 [Source:HGNC Symbol;Acc:HGNC:2022]
27. PLCH2 ENSGALG00000001207 7 1 - - 1.000 - - - - - - - phospholipase C eta 2 [Source:HGNC Symbol;Acc:HGNC:29037]
28. KCNK17 ENSGALG00000010068 1 1 - - 1.000 - - - - - - - potassium two pore domain channel subfamily K member 17 [Source:HGNC Symbol;Acc:HGNC:14465]
29. MAP3K19 ENSGALG00000028457 17 1 - - 1.000 - - - - - - - mitogen-activated protein kinase kinase kinase 19 [Source:HGNC Symbol;Acc:HGNC:26249]
30. AWAT1 ENSGALG00000004367 1 1 - - 1.000 - - - - - - - Gallus gallus acyl-CoA wax alcohol acyltransferase 1 (AWAT1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318429]
31. ENSGALG00000003188 ENSGALG00000003188 2 1 - - 1.000 - - - - - - -
32. PKHD1 ENSGALG00000042136 8 1 - - 1.000 - - - - - - - PKHD1, fibrocystin/polyductin [Source:HGNC Symbol;Acc:HGNC:9016]
33. LOC418667 ENSGALG00000019147 4 1 - - 1.000 - - - - - - - granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like
34. LOC101748744 ENSGALG00000005747 1 1 - - 1.000 - - - - - - - serine protease 23-like, transcript variant X2
35. TWF1 ENSGALG00000009595 6 1 - - 1.000 - - - - - - - twinfilin actin binding protein 1 [Source:NCBI gene;Acc:417797]
36. ADCY8 ENSGALG00000030251 40 1 - - 1.000 - - - - - - - adenylate cyclase 8 [Source:HGNC Symbol;Acc:HGNC:239]
37. ENSGALG00000027597 ENSGALG00000027597 13 1 - - 1.000 - - - - - - -
38. ENSGALG00000026922 ENSGALG00000026922 3 1 - - 1.000 - - - - - - -
39. ARX ENSGALG00000042604 1 1 - - 1.000 - - - - - - - aristaless related homeobox [Source:HGNC Symbol;Acc:HGNC:18060]
40. GABRA5 ENSGALG00000016744 12 1 - - 1.000 - - - - - - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
41. OTOL1 ENSGALG00000026305 14 1 - - 1.000 - - - - - - - otolin 1 [Source:HGNC Symbol;Acc:HGNC:34071]
42. HOXA6 ENSGALG00000028908 1 1 - - 1.000 - - - - - - - homeobox A6 [Source:NCBI gene;Acc:420630]
43. PLD5 ENSGALG00000010737 5 1 - - 1.000 - - - - - - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
44. CAPN9 158 1 - - 1.000 - - - - - - - calpain 9
45. PADI1 ENSGALG00000039572 4 1 - - 1.000 - - - - - - - Gallus gallus peptidyl arginine deiminase 1 (PADI1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318439]
46. GPR22 ENSGALG00000008032 5 1 - - 1.000 - - - - - - - G protein-coupled receptor 22, transcript variant X1
47. SNRKL ENSGALG00000026043 1 1 - - 1.000 - - - - - - - SNF-related serine/threonine-protein kinase-like, transcript variant X2
48. ENSGALG00000004223 ENSGALG00000004223 7 1 - - - - 1.000 - - - - -
49. ENSGALG00000027945 ENSGALG00000027945 2 1 - - 1.000 - - - - - - -
50. ENSGALG00000026592 ENSGALG00000026592 4331 0.99 - - 0.990 - - - - - - -
51. RANBP17 47 0.947 - - - - - 0.947 - - - - RAN binding protein 17
52. CHST3 ENSGALG00000024056 308 0.922 - - - - - - 0.922 - - - carbohydrate sulfotransferase 3 [Source:NCBI gene;Acc:396018]
53. OGDHL ENSGALG00000002266 57 0.909 - - - - - - - 0.909 - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
54. GPD2 ENSGALG00000012543 622 0.89 - - - - - - - 0.890 - - glycerol-3-phosphate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:4456]
55. SNORA68 SNORA68 4 0.888 - - 0.888 - - - - - - -
56. TTC28 ENSGALG00000005676 36 0.879 - - - - - - 0.879 - - - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
57. MDM4 ENSGALG00000000636 91 0.877 - - - 0.877 - - - - - - MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
58. TERF2IP ENSGALG00000000903 41 0.871 - - - - - 0.871 - - - - TERF2 interacting protein [Source:NCBI gene;Acc:395122]
59. CDK17 ENSGALG00000011456 478 0.86 - - - - - - - 0.860 - - cyclin dependent kinase 17 [Source:HGNC Symbol;Acc:HGNC:8750]
60. EXOC5 ENSGALG00000012105 23 0.859 - - - - - 0.859 - - - - exocyst complex component 5 [Source:NCBI gene;Acc:423549]
61. LOC427545 ENSGALG00000004428 3 0.855 - - - - - - 0.855 - - - histamine H3 receptor-like
62. FGD4 ENSGALG00000012932 50 0.855 - - - - - - 0.855 - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
63. ZBTB11 ENSGALG00000015334 22 0.855 - - - - - - 0.855 - - - zinc finger and BTB domain containing 11 [Source:HGNC Symbol;Acc:HGNC:16740]
64. VRK2 ENSGALG00000032770 117 0.855 - - - - - - 0.855 - - - vaccinia related kinase 2 [Source:HGNC Symbol;Acc:HGNC:12719]
65. LHX8 ENSGALG00000011369 77 0.855 - - - - - - 0.855 - - - LIM homeobox 8 [Source:NCBI gene;Acc:424721]
66. ST8SIA6 ENSGALG00000008671 8 0.855 - - - - - - 0.855 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:NCBI gene;Acc:414335]
67. TRIM25 ENSGALG00000003144 12 0.855 - - - - - - 0.855 - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
68. ENSGALG00000027367 ENSGALG00000027367 7 0.855 - - - - - - 0.855 - - -
69. FGA ENSGALG00000009266 291 0.855 - - - - - - 0.855 - - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
70. ADAM23 ENSGALG00000008582 28 0.855 - - - - - - 0.855 - - - ADAM metallopeptidase domain 23 [Source:NCBI gene;Acc:424099]
71. PLA2G1BL ENSGALG00000007236 4 0.855 - - - - - - 0.855 - - - phospholipase A2, major isoenzyme-like
72. GLRA2 ENSGALG00000016571 10 0.855 - - - - - - 0.855 - - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
73. DIRAS2 ENSGALG00000005323 11 0.855 - - - - - - 0.855 - - - DIRAS family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:19323]
74. KCNV1 ENSGALG00000031449 64 0.855 - - - - - - 0.855 - - - potassium voltage-gated channel modifier subfamily V member 1
75. RD RD 99 0.855 - - - - - - 0.855 - - -
76. ENSGALG00000010218 ENSGALG00000010218 12 0.855 - - - - - - 0.855 - - -
77. EGR4 ENSGALG00000016086 4 0.855 - - - - - - 0.855 - - - early growth response 4 [Source:HGNC Symbol;Acc:HGNC:3241]
78. SPERT ENSGALG00000016981 145 0.855 - - - - - - 0.855 - - - spermatid associated [Source:NCBI gene;Acc:418848]
79. POLR1A ENSGALG00000038160 236 0.855 - - - - - - 0.855 - - - RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:17264]
80. MMP13 ENSGALG00000017183 7 0.855 - - - - - - 0.855 - - - matrix metallopeptidase 13 [Source:NCBI gene;Acc:395683]
81. P2RY13 ENSGALG00000039432 16 0.855 - - - - - - 0.855 - - - purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
82. LZTS2 ENSGALG00000023612 9 0.855 - - - - - - 0.855 - - - leucine zipper tumor suppressor 2 [Source:HGNC Symbol;Acc:HGNC:29381]
83. SNORD79 SNORD79 12 0.855 - - - - - - 0.855 - - -
84. FGF13 ENSGALG00000006508 8 0.855 - - - - - - 0.855 - - - fibroblast growth factor 13 [Source:NCBI gene;Acc:414831]
85. HPS3 ENSGALG00000040089 44 0.855 - - - - - - 0.855 - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
86. CBLN4 ENSGALG00000030821 9 0.855 - - - - - - 0.855 - - - cerebellin 4 precursor [Source:NCBI gene;Acc:769254]
87. FOXP1 127 0.855 - - - - - - 0.855 - - - forkhead box P1, transcript variant X14
88. SMPD2 ENSGALG00000033245 462 0.854 - - - - - - - - - 0.854 sphingomyelin phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:11121]
89. IL8 ENSGALG00000026098 16 0.853 - - 0.853 - - - - - - - interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
90. GPC5 ENSGALG00000016902 47 0.851 - - - - - - - 0.851 - - glypican 5 [Source:HGNC Symbol;Acc:HGNC:4453]
91. EGR1 ENSGALG00000007669 30 0.847 - - 0.847 - - - - - - - early growth response 1 [Source:NCBI gene;Acc:373931]
92. DUSP27 ENSGALG00000015453 17 0.847 - - 0.847 - - - - - - - dual specificity phosphatase 27, atypical [Source:HGNC Symbol;Acc:HGNC:25034]
93. ASB12 ENSGALG00000007594 185 0.843 - - - - - 0.843 - - - - ankyrin repeat and SOCS box containing 12 [Source:NCBI gene;Acc:422313]
94. SPAG8 2 0.841 - - - - 0.841 - - - - - sperm associated antigen 8, transcript variant X3
95. IKBIP ENSGALG00000026284 31 0.841 - - - - 0.841 - - - - - IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
96. MOCS1 ENSGALG00000010051 70 0.841 - - - - 0.841 - - - - - molybdenum cofactor synthesis 1 [Source:HGNC Symbol;Acc:HGNC:7190]
97. ENSGALG00000020593 ENSGALG00000020593 1 0.841 - - - - 0.841 - - - - -
98. ENSGALG00000023735 ENSGALG00000023735 12 0.841 - - - - 0.841 - - - - -
99. TOMM34 ENSGALG00000004110 119 0.841 - - - - 0.841 - - - - - translocase of outer mitochondrial membrane 34
100. CDX1 ENSGALG00000005679 461 0.841 - - - - 0.841 - - - - - caudal type homeobox 1 [Source:NCBI gene;Acc:395397]

There are 205 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA