Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for 5_8S_rRNA_5

Gene Name Gene ID Reads Annotation
5_8S_rRNA_5 5_8S_rRNA_5 1










Genes with expression patterns similar to 5_8S_rRNA_5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. 5_8S_rRNA_5 5_8S_rRNA_5 1 2 - - 1.000 - - - - 1.000 -
2. large 9 1 - - 1.000 - - - - - - like-glycosyltransferase, transcript variant X1
3. LIX1 ENSDARG00000052154 9 1 - - 1.000 - - - - - - limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
4. si:dkey-9i5.5 si:dkey-9i5.5 2 1 - - 1.000 - - - - - -
5. arhgap20 ENSDARG00000089326 10 1 - - 1.000 - - - - - - Rho GTPase activating protein 20 [Source:ZFIN;Acc:ZDB-GENE-071015-1]
6. pip5k1cb ENSDARG00000100313 3 1 - - 1.000 - - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
7. ENSDARG00000095340 ENSDARG00000095340 8 1 - - 1.000 - - - - - -
8. zgc:171500 ENSDARG00000071553 2 1 - - 1.000 - - - - - - zgc:171500 [Source:ZFIN;Acc:ZDB-GENE-080204-9]
9. CU856539.4 CU856539.4 0 1 - - 1.000 - - - - - -
10. U6_13 U6_13 0 1 - - 1.000 - - - - - -
11. CYP27A1 CYP27A1 4 1 - - 1.000 - - - - - -
12. BX936386.1 ENSDARG00000097166 5 1 - - 1.000 - - - - - -
13. CABZ01035647.1 CABZ01035647.1 5 1 - - 1.000 - - - - - -
14. plscr3a ENSDARG00000093078 7 1 - - 1.000 - - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
15. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - - 1.000 - - - - - -
16. DDX47 ENSDARG00000102353 0 1 - - 1.000 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:ZFIN;Acc:ZDB-GENE-050522-359]
17. si:dkey-256e7.8 ENSDARG00000092022 4 1 - - 1.000 - - - - - - si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]
18. HIPK1 HIPK1 8 1 - - 1.000 - - - - - -
19. si:dkeyp-104f11.3 si:dkeyp-104f11.3 3 1 - - 1.000 - - - - - -
20. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 1 - - 1.000 - - - - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
21. si:ch211-119o8.6 ENSDARG00000026972, ENSDARG00000115846 13 1 - - - - - - - 1.000 - si:ch211-119o8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-17]
22. cx27.5 ENSDARG00000035553 12 1 - - 1.000 - - - - - - connexin 27.5 [Source:ZFIN;Acc:ZDB-GENE-010619-2]
23. si:dkey-95o3.4 si:dkey-95o3.4 0 1 - - 1.000 - - - - - -
24. SNORA30_1 SNORA30_1 0 1 - - 1.000 - - - - - -
25. c6ast4 ENSDARG00000052578 6 1 - - 1.000 - - - - - - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
26. CABZ01113899.1 CABZ01113899.1 11 1 - - 1.000 - - - - - -
27. mat2ab ENSDARG00000037121 0 1 - - 1.000 - - - - - - methionine adenosyltransferase II, alpha b [Source:ZFIN;Acc:ZDB-GENE-050327-6]
28. si:ch211-214j24.15 ENSDARG00000063481 8 1 - - 1.000 - - - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
29. CRISP3 CRISP3 0 1 - - 1.000 - - - - - -
30. CR589947.1 ENSDARG00000079269 5 1 - - 1.000 - - - - - -
31. si:ch211-106g4.2 si:ch211-106g4.2 6 1 - - 1.000 - - - - - -
32. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1 - - 1.000 - - - - - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
33. mecom ENSDARG00000060808 8 1 - - 1.000 - - - - - - MDS1 and EVI1 complex locus [Source:ZFIN;Acc:ZDB-GENE-050208-123]
34. VWDE ENSDARG00000103443 10 1 - - 1.000 - - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
35. GPR108_1 GPR108_1 2 1 - - 1.000 - - - - - -
36. si:dkey-246e1.1_1 si:dkey-246e1.1_1 0 1 - - 1.000 - - - - - -
37. BX004993.1 BX004993.1 1 1 - - 1.000 - - - - - -
38. si:zfos-1697h8.2 si:zfos-1697h8.2 0 1 - - 1.000 - - - - - -
39. si:dkey-70n11.1 si:dkey-70n11.1 2 1 - - 1.000 - - - - - -
40. BX324198.1 BX324198.1 12 1 - - 1.000 - - - - - -
41. SLC16A7 ENSDARG00000098258 4 1 - - - - - - - 1.000 - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
42. PLEKHA1 PLEKHA1 5 1 - - 1.000 - - - - - -
43. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 1 - - 1.000 - - - - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
44. CABZ01090975.1 CABZ01090975.1 9 1 - - 1.000 - - - - - -
45. mhc1zca ENSDARG00000069471 21 1 - - - - - - - 1.000 - major histocompatibility complex class I ZCA [Source:ZFIN;Acc:ZDB-GENE-070424-4]
46. zgc:172244 zgc:172244 4 1 - - 1.000 - - - - - -
47. ZP2_3 ZP2_3 2 1 - - 1.000 - - - - - -
48. CU075911.1 CU075911.1 2 1 - - 1.000 - - - - - -
49. tmem43 2 1 - - 1.000 - - - - - - transmembrane protein 43
50. CABZ01059392.1 ENSDARG00000063108 3 1 - - 1.000 - - - - - - uncharacterized LOC100334305 [Source:NCBI gene;Acc:100334305]
51. CU929521.1 CU929521.1 1 1 - - 1.000 - - - - - -
52. BX005421.4 BX005421.4 11 1 - - 1.000 - - - - - -
53. si:dkey-111b14.1 si:dkey-111b14.1 3 1 - - 1.000 - - - - - -
54. CABZ01053483.1 CABZ01053483.1 5 1 - - 1.000 - - - - - -
55. si:ch211-225p5.10 si:ch211-225p5.10 4 1 - - 1.000 - - - - - -
56. edar ENSDARG00000099088 1 1 - - 1.000 - - - - - - ectodysplasin A receptor [Source:ZFIN;Acc:ZDB-GENE-070117-2062]
57. HCN2 HCN2 0 1 - - 1.000 - - - - - -
58. si:rp71-1h20.5 ENSDARG00000098176 3 1 - - 1.000 - - - - - - si:rp71-1h20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7869]
59. si:dkey-111b14.5 si:dkey-111b14.5 10 1 - - 1.000 - - - - - -
60. si:dkey-11o18.5 ENSDARG00000087633 3 1 - - 1.000 - - - - - - si:dkey-11o18.5 [Source:ZFIN;Acc:ZDB-GENE-091204-110]
61. DOCK9 ENSDARG00000114086 3 1 - - - - - - - 1.000 - dedicator of cytokinesis 9 [Source:HGNC Symbol;Acc:HGNC:14132]
62. 5_8S_rRNA_3 5_8S_rRNA_3 2 1 - - - - - - - 1.000 -
63. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1 - - 1.000 - - - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
64. BX005294.3 BX005294.3 0 1 - - 1.000 - - - - - -
65. BX000477.1 BX000477.1 1 1 - - 1.000 - - - - - -
66. si:ch211-208k15.1 ENSDARG00000088650 11 1 - - 1.000 - - - - - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
67. RORC ENSDARG00000087195 9 1 - - 1.000 - - - - - - RAR-related orphan receptor C [Source:ZFIN;Acc:ZDB-GENE-110411-42]
68. si:dkey-281a10.1 si:dkey-281a10.1 2 1 - - 1.000 - - - - - -
69. PLCB1 2 1 - - 1.000 - - - - - - phospholipase C beta 1
70. lipi lipi 1 1 - - - - - - - 1.000 -
71. PAK6 PAK6 5 1 - - 1.000 - - - - - -
72. SH3RF3 ENSDARG00000102334 1 1 - - 1.000 - - - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
73. s1pr5b ENSDARG00000052192 52 1 - - 1.000 - - - - - - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
74. kdr ENSDARG00000017321 31 1 - - 1.000 - - - - - - kinase insert domain receptor (a type III receptor tyrosine kinase) [Source:ZFIN;Acc:ZDB-GENE-041001-112]
75. ak5 ENSDARG00000012555 12 1 - - 1.000 - - - - - - adenylate kinase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8256]
76. slc35f1 ENSDARG00000053003 0 1 - - 1.000 - - - - - - solute carrier family 35, member F1 [Source:ZFIN;Acc:ZDB-GENE-060503-463]
77. CABZ01116714.1 CABZ01116714.1 4 1 - - 1.000 - - - - - -
78. mhc1zaa_2 ENSDARG00000092162 0 1 - - 1.000 - - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
79. rom1b ENSDARG00000026926 4 1 - - 1.000 - - - - - - retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]
80. CABZ01071058.1 CABZ01071058.1 4 1 - - 1.000 - - - - - -
81. si:dkey-230i18.1 si:dkey-230i18.1 3 1 - - 1.000 - - - - - -
82. prelp ENSDARG00000070597 99 1 - - 1.000 - - - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
83. gabrr2a ENSDARG00000052982 21 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
84. ros1 ENSDARG00000087197 9 1 - - 1.000 - - - - - - c-ros oncogene 1 , receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020506-1]
85. AL954746.1 AL954746.1 0 1 - - 1.000 - - - - - -
86. mki67ip mki67ip 0 1 - - 1.000 - - - - - -
87. si:ch73-223d24.4 si:ch73-223d24.4 5 1 - - 1.000 - - - - - -
88. CR936371.2 ENSDARG00000117302 2 1 - - 1.000 - - - - - -
89. si:dkey-72l14.7 si:dkey-72l14.7 3 1 - - 1.000 - - - - - -
90. ZBED1_4 ZBED1_4 2 1 - - 1.000 - - - - - -
91. zgc:162297 ENSDARG00000100912, ENSDARG00000114809 12 1 - - 1.000 - - - - - - zgc:162297 [Source:ZFIN;Acc:ZDB-GENE-070410-62]
92. TRAF2 TRAF2 13 1 - - 1.000 - - - - - -
93. si:dkey-20i20.3 ENSDARG00000092246 4 1 - - 1.000 - - - - - - si:dkey-20i20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-623]
94. creb5b ENSDARG00000070536 9 1 - - 1.000 - - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
95. vtg7 ENSDARG00000092419, ENSDARG00000112466, ENSDARG00000113334 48 1 - - 1.000 - - - - - - vitellogenin 7 [Source:ZFIN;Acc:ZDB-GENE-001201-6]
96. GABRR3 GABRR3 3 1 - - 1.000 - - - - - -
97. 5_8S_rRNA_4 5_8S_rRNA_4 1 1 - - - - - - - 1.000 -
98. zgc:101553 zgc:101553 1 1 - - 1.000 - - - - - -
99. PROC PROC 11 1 - - 1.000 - - - - - -
100. si:ch211-250c4.5 ENSDARG00000075943 10 1 - - 1.000 - - - - - - si:ch211-250c4.5 [Source:ZFIN;Acc:ZDB-GENE-081107-33]

There are 89 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA