Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for 5_8S_rRNA

Gene Name Gene ID Reads Annotation
5_8S_rRNA 5_8S_rRNA 24










Genes with expression patterns similar to 5_8S_rRNA

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. 5_8S_rRNA 5_8S_rRNA 24 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. NAT14 ENSDARG00000115349 21 2.678 - - - 0.943 0.854 - 0.881 - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
3. neurod6b ENSDARG00000020794 164 2 - - - - - 1.000 1.000 - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
4. si:ch211-113a14.17 15 2 - 1.000 - - - - 1.000 - - si:ch211-113a14.17
5. coch ENSDARG00000024032 7 2 - 1.000 - - - - 1.000 - - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
6. CABZ01092722.1 CABZ01092722.1 2 2 - - - - - 1.000 - - 1.000
7. trpc2 trpc2 10 2 - - - - - 1.000 1.000 - -
8. CU928126.3 CU928126.3 18 1.946 - - - - - 0.946 - - 1.000
9. gper gper 4 1.943 - - - - - - 1.000 - 0.943
10. grifin ENSDARG00000033382 141 1.918 - - - - - - 1.000 - 0.918 galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
11. galr1 galr1 9 1.893 - - - - 0.893 - - - 1.000
12. zgc:173702_1 ENSDARG00000110229 24 1.891 - 0.902 - - - 0.989 - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
13. fip1l1a ENSDARG00000043328 7 1.864 - 0.885 - - - - - - 0.979 FIP1 like 1a (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-8]
14. CR381673.2 ENSDARG00000103241 7 1.859 - - - - - - 1.000 - 0.859
15. RBM33_1 RBM33_1 7 1.835 - 1.000 - - - - - - 0.835
16. SNORD30 SNORD30 34 1.821 - - - - - 0.969 0.852 - -
17. CZv9_NA429H14orf28 CZv9_NA429H14orf28 157 1.806 - 0.851 - - - - 0.955 - -
18. si:ch211-10m5.3 si:ch211-10m5.3 10 1.8 - - - - - 0.941 - - 0.859
19. si:ch211-212k5.2 si:ch211-212k5.2 152 1.798 - - - - - 1.000 0.798 - -
20. si:ch211-258f1.3 ENSDARG00000105119 23 1.79 - - - - 0.975 - 0.815 - - si:ch211-258f1.3 [Source:ZFIN;Acc:ZDB-GENE-070912-252]
21. dand5 ENSDARG00000036471 8 1.781 - - - - - - 1.000 - 0.781 DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
22. pde12 ENSDARG00000030964 615 1.776 - 0.878 - - - 0.898 - - - phosphodiesterase 12 [Source:ZFIN;Acc:ZDB-GENE-060519-25]
23. CELF6 ENSDARG00000101933 228 1.772 - 0.885 - - - - 0.887 - - CUGBP Elav-like family member 6 [Source:HGNC Symbol;Acc:HGNC:14059]
24. epsti1 ENSDARG00000094578 33 1.75 - 0.825 - - - 0.925 - - - epithelial stromal interaction 1 [Source:ZFIN;Acc:ZDB-GENE-081104-172]
25. prox1b ENSDARG00000088810, ENSDARG00000113014 33 1.744 - 0.894 - 0.850 - - - - - prospero homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050107-3]
26. PACRG ENSDARG00000087556 7 1.743 - - - - 0.893 - 0.850 - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
27. tbc1d2b ENSDARG00000061986 247 1.741 - - - - - 0.944 0.797 - - TBC1 domain family, member 2B [Source:ZFIN;Acc:ZDB-GENE-100922-148]
28. dph3 ENSDARG00000043360 117 1.727 - 0.901 - - - - 0.826 - - diphthamide biosynthesis 3 [Source:ZFIN;Acc:ZDB-GENE-050522-545]
29. si:dkey-220o10.1 si:dkey-220o10.1 63 1.719 - 0.730 - - - 0.989 - - -
30. si:ch211-244b2.3 ENSDARG00000069244 19 1.718 - - - - - 0.718 1.000 - - si:ch211-244b2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4737]
31. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 1.713 - 1.000 - - - - - 0.713 - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
32. si:ch1073-155h21.1 ENSDARG00000007582 137 1.713 - - - - - - 1.000 0.713 - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
33. CABZ01046996.1 ENSDARG00000111833 1 1.713 - - - - - - - 0.713 1.000
34. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1.704 - - - 0.704 - - 1.000 - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
35. efhb ENSDARG00000069703 9 1.703 - - - - - - 1.000 - 0.703 EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
36. si:ch211-202a12.8 si:ch211-202a12.8 2 1.703 - - - - - - 1.000 - 0.703
37. il6st ENSDARG00000104693 55 1.686 - - - - - 0.898 0.788 - - interleukin 6 signal transducer [Source:ZFIN;Acc:ZDB-GENE-080104-6]
38. CR352328.3 CR352328.3 9 1.669 - - - - - 0.890 0.779 - -
39. ankrd24 ENSDARG00000062103 70 1.662 - - - - 0.783 0.879 - - - ankyrin repeat domain 24 [Source:ZFIN;Acc:ZDB-GENE-050208-747]
40. si:dkey-4c15.12 ENSDARG00000095350 119 1.658 - 0.713 - - - 0.945 - - - si:dkey-4c15.12 [Source:ZFIN;Acc:ZDB-GENE-050420-351]
41. si:dkeyp-89c11.1 si:dkeyp-89c11.1 11 1.657 - - - 0.943 - - 0.714 - -
42. oprk1 ENSDARG00000006894 43 1.656 - - - - 0.774 0.882 - - - opioid receptor, kappa 1 [Source:ZFIN;Acc:ZDB-GENE-030729-1]
43. si:dkey-267k7.4 si:dkey-267k7.4 111 1.655 - 0.894 - - - 0.761 - - -
44. sc:d0139 sc:d0139 233 1.639 - 0.741 - - - - 0.898 - -
45. rorcb ENSDARG00000017780 233 1.615 - 0.859 - - - 0.756 - - - RAR-related orphan receptor C b [Source:ZFIN;Acc:ZDB-GENE-040724-215]
46. zbtb34 ENSDARG00000013492 32 1.614 - 0.790 - - 0.824 - - - - zinc finger and BTB domain containing 34 [Source:ZFIN;Acc:ZDB-GENE-050624-2]
47. si:ch211-222k6.3 ENSDARG00000071578 127 1.591 - - - - - 0.765 0.826 - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
48. CU693494.3 CU693494.3 169 1.576 - 0.791 - - - - 0.785 - -
49. si:ch211-273j9.2 si:ch211-273j9.2 79 1.574 - - - - - 0.866 0.708 - -
50. TATDN1 ENSDARG00000036924 246 1.557 0.714 - - - - 0.843 - - - TatD DNase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040704-56]
51. dusp22b ENSDARG00000039850 133 1.553 - - 0.715 - - 0.838 - - - dual specificity phosphatase 22b [Source:ZFIN;Acc:ZDB-GENE-050417-257]
52. bpgm ENSDARG00000070826 582 1.548 - 0.802 - - - - 0.746 - - 2,3-bisphosphoglycerate mutase [Source:ZFIN;Acc:ZDB-GENE-040718-375]
53. si:rp71-45g20.6 si:rp71-45g20.6 19 1.547 - - - - - - 0.834 0.713 -
54. si:ch73-112l6.1 ENSDARG00000093126 87 1.54 - 0.819 - - - 0.721 - - - si:ch73-112l6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-14]
55. rpap1 ENSDARG00000075072, ENSDARG00000117161 250 1.526 - 0.712 - - - 0.814 - - - RNA polymerase II associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-090914-1]
56. asic2 ENSDARG00000006849 18 1.524 - - - 0.752 - - - - 0.772 acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
57. si:dkey-1b17.5 ENSDARG00000101425 130 1.522 - - - - - 0.707 0.815 - - si:dkey-1b17.5 [Source:ZFIN;Acc:ZDB-GENE-050208-704]
58. lrriq1 ENSDARG00000093781 83 1.519 - - - - - 0.786 0.733 - - leucine-rich repeats and IQ motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-050419-235]
59. pou2f3 ENSDARG00000052387 103 1.518 - 0.759 - - - 0.759 - - - POU class 2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-060512-299]
60. vrk2 ENSDARG00000021547 45 1.51 - 0.762 - - - - 0.748 - - vaccinia related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1046]
61. PDXP ENSDARG00000109823 195 1.476 - 0.755 - - - 0.721 - - - pyridoxal (pyridoxine, vitamin B6) phosphatase [Source:ZFIN;Acc:ZDB-GENE-080723-69]
62. zgc:171971 ENSDARG00000042054 388 1.465 - 0.723 - - - 0.742 - - - zgc:171971 [Source:ZFIN;Acc:ZDB-GENE-070928-37]
63. PKN2 ENSDARG00000101293 358 1.462 0.714 - - - - 0.748 - - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
64. atrip ENSDARG00000063076 385 1.418 - 0.713 - - - 0.705 - - - ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
65. rpn2 ENSDARG00000009724 322 1 - - - - - 1.000 - - - ribophorin II [Source:ZFIN;Acc:ZDB-GENE-030131-7928]
66. mir30b 4 1 - - - - - - 1.000 - - microRNA 30b
67. si:dkeyp-70f9.7 ENSDARG00000042663 1 1 - - - - - - 1.000 - - si:dkeyp-70f9.7 [Source:ZFIN;Acc:ZDB-GENE-070705-550]
68. si:ch211-150o23.4 si:ch211-150o23.4 7 1 - - - - - - 1.000 - -
69. epha6 ENSDARG00000022971 52 1 - - - - - - 1.000 - - eph receptor A6 [Source:ZFIN;Acc:ZDB-GENE-090311-43]
70. CABZ01028403.1 CABZ01028403.1 48 1 - - - - - - 1.000 - -
71. si:ch211-288g17.4 ENSDARG00000070960 0 1 - - - - - - - - 1.000 si:ch211-288g17.4 [Source:ZFIN;Acc:ZDB-GENE-060531-62]
72. klc4_1 ENSDARG00000086985 22 1 - - - - - - 1.000 - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
73. si:dkey-216e24.5 si:dkey-216e24.5 1 1 - - - - - - 1.000 - -
74. zgc:175248 ENSDARG00000104153 1 1 - - - - - - 1.000 - - zgc:175248 [Source:ZFIN;Acc:ZDB-GENE-080204-93]
75. taf4b ENSDARG00000075732 3 1 - 1.000 - - - - - - - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
76. BX682234.1 ENSDARG00000074732 5 1 - 1.000 - - - - - - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
77. pde6c ENSDARG00000100397 49 1 - - - - - 1.000 - - - phosphodiesterase 6C, cGMP-specific, cone, alpha prime [Source:ZFIN;Acc:ZDB-GENE-040426-1664]
78. zgc:77880 ENSDARG00000030563 208 1 - 1.000 - - - - - - - zgc:77880 [Source:ZFIN;Acc:ZDB-GENE-040426-1901]
79. pip5k1cb ENSDARG00000100313 3 1 - - - - - 1.000 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
80. si:ch211-209p16.1 si:ch211-209p16.1 1 1 - - - - - - - - 1.000
81. si:ch211-215m21.11 si:ch211-215m21.11 2 1 - - - - - 1.000 - - -
82. si:dkey-104n9.1 ENSDARG00000093042 41 1 - - - - - - 1.000 - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
83. ZNF337_24 ZNF337_24 16 1 - 1.000 - - - - - - -
84. si:dkey-259p7.1 si:dkey-259p7.1 59 1 - 1.000 - - - - - - -
85. si:dkey-257e4.5 si:dkey-257e4.5 3 1 - 1.000 - - - - - - -
86. BX321875.3 ENSDARG00000112569 24 1 - - - - - - 1.000 - -
87. AL929220.1 ENSDARG00000103323 14 1 - - - - - - 1.000 - -
88. tmem232 ENSDARG00000067646 4 1 - 1.000 - - - - - - - transmembrane protein 232 [Source:ZFIN;Acc:ZDB-GENE-070705-434]
89. GBF1 ENSDARG00000027016 30 1 - - - - - - 1.000 - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-081107-54]
90. slc34a1a ENSDARG00000028824 35 1 - - - - - - 1.000 - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
91. si:ch211-105d18.7 si:ch211-105d18.7 6 1 - 1.000 - - - - - - -
92. si:ch211-11i5.3 si:ch211-11i5.3 7 1 - - - - - - 1.000 - -
93. prpf3_1 ENSDARG00000086425, ENSDARG00000116776 84 1 - - - - - 1.000 - - - PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]
94. BX927369.5 BX927369.5 1 1 - - - - - - 1.000 - -
95. si:ch73-256j6.4 ENSDARG00000078519, ENSDARG00000093574 3 1 - - - - - - - - 1.000 si:ch73-256j6.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3779]
96. ZNF337_23 ZNF337_23 39 1 - - - - - - 1.000 - -
97. ppm1na ENSDARG00000010231 3 1 - - - - - - 1.000 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
98. ddit4 ENSDARG00000037618 37 1 - 1.000 - - - - - - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
99. si:ch211-160d14.9 8 1 - - - - - - 1.000 - - si:ch211-160d14.9, transcript variant X1
100. aox1 aox1 14 1 - - - - - - 1.000 - -

There are 1537 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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