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Results for 5S_rRNA_7

Gene Name Gene ID Reads Annotation
5S_rRNA_7 5S_rRNA_7 55










Genes with expression patterns similar to 5S_rRNA_7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. 5S_rRNA_7 5S_rRNA_7 55 7 1.000 1.000 1.000 1.000 - 1.000 - 1.000 1.000
2. zgc:100906 ENSDARG00000033599 344 1.837 - 0.956 - - - 0.881 - - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
3. syt4 ENSDARG00000036505 421 1.832 - 0.894 - - - 0.938 - - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
4. SYT2 ENSDARG00000014169 265 1.797 - 0.958 - - - 0.839 - - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
5. KCNB2 ENSDARG00000088842 35 1.78 - 0.780 - - - 1.000 - - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
6. hoxb6b ENSDARG00000026513, ENSDARG00000111786 544 1.737 - 0.905 - - - 0.832 - - - homeobox B6b [Source:ZFIN;Acc:ZDB-GENE-000823-7]
7. mapk11 ENSDARG00000045836 846 1.725 - 0.887 - - - 0.838 - - - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
8. slc35g2b ENSDARG00000045447 378 1.715 - 0.780 - - - 0.935 - - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
9. SPOCK1 ENSDARG00000074644 794 1.682 - 0.756 - - - 0.926 - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
10. lgi2a ENSDARG00000111069 965 1.672 - 0.740 - - - 0.932 - - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
11. nlgn3a ENSDARG00000104786 91 1.67 - 0.916 - - - 0.754 - - - neuroligin 3a [Source:ZFIN;Acc:ZDB-GENE-071219-1]
12. lbx1b ENSDARG00000018611 399 1.665 - 0.732 - - - 0.933 - - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
13. nrxn2b ENSDARG00000063150 343 1.663 - 0.728 - - - 0.935 - - - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
14. scn2b ENSDARG00000101713 796 1.663 - 0.709 - - - 0.954 - - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
15. gng3 ENSDARG00000009553 2530 1.652 - 0.706 - - - 0.946 - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
16. slc18a3a ENSDARG00000006356 1285 1.652 - 0.949 - - - 0.703 - - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
17. stx1b ENSDARG00000000503 2724 1.644 - 0.818 - - - 0.826 - - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
18. nadl1.1 1200 1.643 - 0.911 - - - 0.732 - - - neural adhesion molecule L1.1, transcript variant X1
19. dbx2 2971 1.642 - 0.737 - - - 0.905 - - - developing brain homeobox 2
20. PRICKLE2 PRICKLE2 69 1.638 - 0.916 - - - 0.722 - - -
21. SNAP91 ENSDARG00000098809 556 1.634 - 0.813 - - - 0.821 - - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
22. dync1i1 ENSDARG00000060948 554 1.632 - 0.810 - - - 0.822 - - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
23. scn8aa ENSDARG00000005775 792 1.631 - 0.798 - - - 0.833 - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
24. st3gal2 ENSDARG00000112898 370 1.618 - 0.916 - - - 0.702 - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050419-181]
25. adam23a ENSDARG00000062323 580 1.604 - 0.780 - - - 0.824 - - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
26. itm2ca ENSDARG00000043448 1265 1.602 - 0.746 - - - 0.856 - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
27. slc7a14a ENSDARG00000010816 425 1.599 - 0.745 - - - 0.854 - - - solute carrier family 7, member 14a [Source:ZFIN;Acc:ZDB-GENE-070912-112]
28. sncb ENSDARG00000104945 8197 1.59 - 0.782 - - - 0.808 - - - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
29. ctnnd2b ENSDARG00000003779 964 1.589 - 0.791 - - - 0.798 - - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
30. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.584 - 0.829 - - - 0.755 - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
31. dnm1b ENSDARG00000009281 219 1.58 - 0.800 - - - 0.780 - - - dynamin 1b [Source:ZFIN;Acc:ZDB-GENE-100920-3]
32. porcn ENSDARG00000052558, ENSDARG00000111556 110 1.579 - - 0.742 - - 0.837 - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
33. pax6a ENSDARG00000103379 3061 1.573 - 0.722 - - - 0.851 - - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
34. mb21d2a mb21d2a 421 1.571 - 0.743 - - - 0.828 - - -
35. MCTP1 MCTP1 219 1.57 - 0.742 - - - 0.828 - - -
36. ARHGAP22 ENSDARG00000076434 1406 1.558 - 0.787 - - - 0.771 - - - Rho GTPase activating protein 22 [Source:HGNC Symbol;Acc:HGNC:30320]
37. cadm3 ENSDARG00000057013 1545 1.557 - 0.797 - - - 0.760 - - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
38. nhlh2 ENSDARG00000025495 1860 1.554 - 0.703 - - - 0.851 - - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
39. nova2 ENSDARG00000017673 7685 1.553 - 0.757 - - - 0.796 - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
40. neurog1 ENSDARG00000056130 3924 1.547 - 0.814 - - - 0.733 - - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
41. sox19b ENSDARG00000040266 532 1.538 - 0.752 - - - 0.786 - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
42. CHL1 CHL1 1553 1.535 - 0.779 - - - 0.756 - - -
43. AL935029.1 AL935029.1 514 1.534 - 0.712 - - - 0.822 - - -
44. celf4 ENSDARG00000070045 1537 1.526 - 0.712 - - - 0.814 - - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
45. scrt2 ENSDARG00000056175 4331 1.525 - 0.804 - - - 0.721 - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
46. rab3c ENSDARG00000014462, ENSDARG00000042803 508 1.525 - 0.721 - - - 0.804 - - - RAB3C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-263]
47. vgf ENSDARG00000105529 247 1.513 - 0.755 - - - 0.758 - - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
48. syngr3b ENSDARG00000025034 290 1.504 - 0.711 - - - 0.793 - - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
49. nrxn3b ENSDARG00000062693 192 1.504 - 0.797 - - - 0.707 - - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
50. CDH12 CDH12 44 1.493 - 0.768 - - - 0.725 - - -
51. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1.485 - 0.721 - - - 0.764 - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
52. cplx3b ENSDARG00000089486 315 1.484 - 0.744 - - - 0.740 - - - complexin 3b [Source:ZFIN;Acc:ZDB-GENE-091204-403]
53. MAP1A MAP1A 847 1.476 - 0.769 - - - 0.707 - - -
54. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 1.445 - 0.709 - - - 0.736 - - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
55. relnl relnl 863 1.438 - 0.721 - - - 0.717 - - -
56. shank2 ENSDARG00000062325 66 1 - - - - - 1.000 - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
57. si:dkey-228i19.32 si:dkey-228i19.32 9 1 - - - - - 1.000 - - -
58. PRR12 PRR12 38 1 - - - - - 1.000 - - -
59. ELFN1 ELFN1 59 1 - - - - - 1.000 - - -
60. rgs11 ENSDARG00000037646 24 1 - - - - - 1.000 - - - regulator of G protein signaling 11 [Source:ZFIN;Acc:ZDB-GENE-080220-46]
61. prdm14 ENSDARG00000045371 106 0.992 - - - - - 0.992 - - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
62. RNF208 ENSDARG00000078056 60 0.982 - - - - - 0.982 - - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
63. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 0.978 - - - - - 0.978 - - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
64. ntrk2a ENSDARG00000059897 185 0.978 - - - - - 0.978 - - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
65. rad18 ENSDARG00000027938 574 0.975 - 0.975 - - - - - - - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
66. rab39b rab39b 449 0.975 - - - - - 0.975 - - -
67. slc12a5b ENSDARG00000078187 329 0.972 - - - - - 0.972 - - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
68. ptf1a ENSDARG00000014479 349 0.972 - - - - - 0.972 - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
69. bai3 bai3 92 0.968 - - - - - 0.968 - - -
70. vamp2 ENSDARG00000056877 2158 0.966 - - - - - 0.966 - - - vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
71. dtnbp1b ENSDARG00000055206 64 0.966 - - - - - 0.966 - - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
72. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 0.965 - - - - - 0.965 - - - RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
73. si:ch211-270n8.3 87 0.965 - 0.965 - - - - - - - si:ch211-270n8.3, transcript variant X2
74. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 0.964 - - - - - 0.964 - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
75. dgcr8 ENSDARG00000035564, ENSDARG00000113898 39 0.964 - 0.964 - - - - - - - DGCR8 microprocessor complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-3421]
76. NPTXR NPTXR 241 0.963 - - - - - 0.963 - - -
77. lbx1a ENSDARG00000018321 634 0.961 - - - - - 0.961 - - - ladybird homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040724-40]
78. cspg5a ENSDARG00000069981 1699 0.959 - - - - - 0.959 - - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
79. slc8a2b ENSDARG00000100592 598 0.959 - - - - - 0.959 - - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
80. BX000430.1 ENSDARG00000112057 135 0.957 - - - - - 0.957 - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
81. nkx2.2a ENSDARG00000053298 747 0.957 - 0.957 - - - - - - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
82. nacad ENSDARG00000012347 1268 0.957 - - - - - 0.957 - - - NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
83. lhx1a ENSDARG00000014018 958 0.956 - - - - - 0.956 - - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
84. snx18b ENSDARG00000044246, ENSDARG00000110012 51 0.956 - 0.956 - - - - - - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
85. BX088711.1 BX088711.1 125 0.956 - 0.956 - - - - - - -
86. BX284672.1 BX284672.1 11 0.956 - 0.956 - - - - - - -
87. acd ENSDARG00000078055 98 0.956 - 0.956 - - - - - - - ACD, shelterin complex subunit and telomerase recruitment factor [Source:ZFIN;Acc:ZDB-GENE-081022-45]
88. mir219-1 101 0.956 - 0.956 - - - - - - - microRNA 219-1
89. calca ENSDARG00000056590 150 0.954 - 0.954 - - - - - - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
90. SHANK1 ENSDARG00000060539 102 0.954 - - - - - 0.954 - - - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
91. tbx16 ENSDARG00000007329 255 0.953 - - - - - 0.953 - - - T-box 16 [Source:ZFIN;Acc:ZDB-GENE-990615-5]
92. zic6 ENSDARG00000071496 402 0.952 - - - - - 0.952 - - - zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
93. map1aa ENSDARG00000059601 599 0.951 - - - - - 0.951 - - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
94. lzts3b ENSDARG00000058558 166 0.95 - - - - - 0.950 - - - leucine zipper, putative tumor suppressor family member 3b [Source:ZFIN;Acc:ZDB-GENE-110411-249]
95. CR848045.1 CR848045.1 459 0.949 - 0.949 - - - - - - -
96. GALNT9 ENSDARG00000006832 120 0.949 - - - - - 0.949 - - - polypeptide N-acetylgalactosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060526-21]
97. CRIP2 ENSDARG00000070670 323 0.948 - - - - - 0.948 - - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
98. BAI1_1 BAI1_1 57 0.944 - - - - - 0.944 - - -
99. zgc:194665 ENSDARG00000004577 136 0.944 - - - - - 0.944 - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
100. plekho1a ENSDARG00000061191 98 0.943 - - - - - 0.943 - - - pleckstrin homology domain containing, family O member 1a [Source:ZFIN;Acc:ZDB-GENE-060503-433]

There are 873 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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