Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for 5S_rRNA_5

Gene Name Gene ID Reads Annotation
5S_rRNA_5 5S_rRNA_5 1










Genes with expression patterns similar to 5S_rRNA_5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SMCHD1 ENSDARG00000104374 2 2 - - 1.000 - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
2. 5S_rRNA_5 5S_rRNA_5 1 2 - - 1.000 - 1.000 - - - -
3. si:dkey-151m22.9 si:dkey-151m22.9 6 1.877 - - 1.000 - 0.877 - - - -
4. si:ch211-214p13.9 ENSDARG00000091411 2 1.755 - - 1.000 - 0.755 - - - - si:ch211-214p13.9 [Source:ZFIN;Acc:ZDB-GENE-060503-213]
5. si:dkey-25i10.1 ENSDARG00000098536 0 1 - - 1.000 - - - - - - si:dkey-25i10.1 [Source:ZFIN;Acc:ZDB-GENE-110913-114]
6. si:dkeyp-20g2.3 ENSDARG00000093389, ENSDARG00000094279 1 1 - - - - 1.000 - - - - si:dkeyp-20g2.3 [Source:ZFIN;Acc:ZDB-GENE-070705-537]
7. ODF2 ODF2 6 1 - - - - 1.000 - - - -
8. DXO ENSDARG00000036852 16 1 - - 1.000 - - - - - - decapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992]
9. si:ch211-131e11.20 si:ch211-131e11.20 0 1 - - 1.000 - - - - - -
10. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - 1.000 - - - - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
11. si:ch211-133d10.1 si:ch211-133d10.1 0 1 - - - - 1.000 - - - -
12. AKAP13 ENSDARG00000079994 1 1 - - 1.000 - - - - - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
13. BX005082.1 ENSDARG00000098558 2 1 - - 1.000 - - - - - -
14. CABZ01024686.1 CABZ01024686.1 1 1 - - 1.000 - - - - - -
15. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
16. BX005421.4 BX005421.4 11 1 - - - - 1.000 - - - -
17. SMU1 SMU1 3 1 - - 1.000 - - - - - -
18. AKNA_1 AKNA_1 2 1 - - 1.000 - - - - - -
19. BX511182.1 BX511182.1 8 1 - - 1.000 - - - - - -
20. CU693378.1 CU693378.1 0 1 - - 1.000 - - - - - -
21. si:ch211-155d24.7 si:ch211-155d24.7 17 1 - - 1.000 - - - - - -
22. AL929092.1_1 ENSDARG00000092217 3 1 - - 1.000 - - - - - -
23. ern2 ENSDARG00000058475 0 1 - - 1.000 - - - - - - endoplasmic reticulum to nucleus signaling 2 [Source:ZFIN;Acc:ZDB-GENE-090312-15]
24. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - 1.000 - - - -
25. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
26. SCAMP5 SCAMP5 19 1 - - 1.000 - - - - - -
27. si:ch211-113a14.26_1 5 1 - - 1.000 - - - - - - si:ch211-113a14.26
28. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
29. si:dkey-231l1.12 si:dkey-231l1.12 0 1 - - - - 1.000 - - - -
30. adamts18 ENSDARG00000001999 5 1 - - 1.000 - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 18 [Source:ZFIN;Acc:ZDB-GENE-070815-1]
31. socs1a ENSDARG00000038095 20 1 - - 1.000 - - - - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
32. F13A1 F13A1 1 1 - - - - 1.000 - - - -
33. CABZ01076801.1 CABZ01076801.1 3 1 - - - - 1.000 - - - -
34. dcst2 ENSDARG00000088693 1 1 - - - - 1.000 - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
35. si:ch211-281g2.3 si:ch211-281g2.3 1 1 - - 1.000 - - - - - -
36. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - - 1.000 - - - - - -
37. si:ch211-100p3.1 si:ch211-100p3.1 1 1 - - 1.000 - - - - - -
38. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
39. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
40. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
41. ftr12 ENSDARG00000053366, ENSDARG00000074118, ENSDARG00000113522 0 1 - - - - 1.000 - - - - finTRIM family, member 12 [Source:ZFIN;Acc:ZDB-GENE-070912-196]
42. guca1c ENSDARG00000030758 9 1 - - 1.000 - - - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
43. tmem184b tmem184b 2 1 - - - - 1.000 - - - -
44. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
45. si:ch73-383o19.2 si:ch73-383o19.2 3 1 - - 1.000 - - - - - -
46. CR790363.3 CR790363.3 5 1 - - 1.000 - - - - - -
47. si:ch211-11i5.3 si:ch211-11i5.3 7 1 - - 1.000 - - - - - -
48. wibg wibg 2 1 - - - - 1.000 - - - -
49. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - 1.000 - - - -
50. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - 1.000 - - - -
51. kcnh8 ENSDARG00000062640 10 1 - - 1.000 - - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-204]
52. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
53. U1_51 U1_51 0 1 - - 1.000 - - - - - -
54. il2rgb ENSDARG00000053702 0 1 - - 1.000 - - - - - - interleukin 2 receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-080402-2]
55. MCC ENSDARG00000105237 4 1 - - 1.000 - - - - - - MCC, WNT signaling pathway regulator [Source:ZFIN;Acc:ZDB-GENE-141210-1]
56. loxl4 ENSDARG00000025089 5 1 - - - - 1.000 - - - - lysyl oxidase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080722-19]
57. ifnphi3 ENSDARG00000070676 7 1 - - 1.000 - - - - - - interferon phi 3 [Source:ZFIN;Acc:ZDB-GENE-071128-2]
58. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
59. RECK ENSDARG00000090039 15 1 - - 1.000 - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
60. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
61. si:busm1-180g5.7_1 si:busm1-180g5.7_1 0 1 - - 1.000 - - - - - -
62. agbl5 ENSDARG00000045900 2 1 - - 1.000 - - - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
63. crygs1 ENSDARG00000042992 45 1 - - - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
64. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
65. viml ENSDARG00000044501 5 1 - - 1.000 - - - - - - vimentin like [Source:ZFIN;Acc:ZDB-GENE-040426-1743]
66. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
67. si:ch211-152f22.2 si:ch211-152f22.2 0 1 - - 1.000 - - - - - -
68. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 1 - - 1.000 - - - - - - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
69. ZBED1_5 ZBED1_5 1 1 - - 1.000 - - - - - -
70. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
71. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
72. SCARNA1 SCARNA1 0 1 - - 1.000 - - - - - -
73. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
74. srd5a2a ENSDARG00000043587 21 1 - - 1.000 - - - - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
75. UBE2O 1 1 - - 1.000 - - - - - - ubiquitin-conjugating enzyme E2O
76. tenc1a tenc1a 3 1 - - 1.000 - - - - - -
77. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
78. si:dkey-32n7.4 ENSDARG00000002956 3 1 - - 1.000 - - - - - - si:dkey-32n7.4 [Source:ZFIN;Acc:ZDB-GENE-110411-175]
79. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
80. FBXO16 ENSDARG00000033949 10 1 - - 1.000 - - - - - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
81. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
82. TMEM241 ENSDARG00000090685 11 1 - - 1.000 - - - - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
83. ZNF70 ZNF70 2 1 - - 1.000 - - - - - -
84. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
85. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
86. cd44a ENSDARG00000087863 4 1 - - - - 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
87. slc25a15a ENSDARG00000063539 50 1 - - 1.000 - - - - - - solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15a [Source:ZFIN;Acc:ZDB-GENE-070112-1072]
88. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
89. LRRC3C LRRC3C 0 1 - - 1.000 - - - - - -
90. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
91. CABZ01102230.1 CABZ01102230.1 1 1 - - - - 1.000 - - - -
92. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -
93. si:ch211-1f22.4 si:ch211-1f22.4 2 1 - - - - 1.000 - - - -
94. rerglb ENSDARG00000054324, ENSDARG00000116048 14 1 - - 1.000 - - - - - - RERG/RAS-like b [Source:ZFIN;Acc:ZDB-GENE-040724-73]
95. fbxl8 ENSDARG00000054222 3 1 - - - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
96. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
97. si:dkey-26g8.12 si:dkey-26g8.12 3 1 - - - - 1.000 - - - -
98. MOB2 MOB2 4 1 - - - - 1.000 - - - -
99. si:ch73-60g14.2 si:ch73-60g14.2 1 1 - - - - 1.000 - - - -
100. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -

There are 260 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA