Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for 5S_rRNA_5

Gene Name Gene ID Reads Annotation
5S_rRNA_5 5S_rRNA_5 1










Genes with expression patterns similar to 5S_rRNA_5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SMCHD1 ENSDARG00000104374 2 2 - - 1.000 - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
2. 5S_rRNA_5 5S_rRNA_5 1 2 - - 1.000 - 1.000 - - - -
3. si:dkey-151m22.9 si:dkey-151m22.9 6 1.877 - - 1.000 - 0.877 - - - -
4. si:ch211-214p13.9 ENSDARG00000091411 2 1.755 - - 1.000 - 0.755 - - - - si:ch211-214p13.9 [Source:ZFIN;Acc:ZDB-GENE-060503-213]
5. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1 - - 1.000 - - - - - -
6. si:dkey-108f8.6 si:dkey-108f8.6 0 1 - - - - 1.000 - - - -
7. smchd1 ENSDARG00000104374 0 1 - - 1.000 - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
8. mlxip ENSDARG00000059474 12 1 - - - - 1.000 - - - - MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
9. SNORA42 SNORA42 24 1 - - - - 1.000 - - - -
10. slc34a1a ENSDARG00000028824 35 1 - - 1.000 - - - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
11. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
12. UBE2O 1 1 - - 1.000 - - - - - - ubiquitin-conjugating enzyme E2O
13. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - 1.000 - - - -
14. PEG3_8 PEG3_8 1 1 - - 1.000 - - - - - -
15. SLC22A14 SLC22A14 24 1 - - 1.000 - - - - - -
16. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
17. CU469547.1 CU469547.1 0 1 - - - - 1.000 - - - -
18. gzmk ENSDARG00000028780 1 1 - - 1.000 - - - - - - granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
19. si:dkey-96n2.2 si:dkey-96n2.2 0 1 - - - - 1.000 - - - -
20. kcnh8 ENSDARG00000062640 10 1 - - 1.000 - - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-204]
21. CABZ01079192.1 ENSDARG00000101629 23 1 - - 1.000 - - - - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
22. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
23. si:dkey-57c22.1 ENSDARG00000093846 12 1 - - - - 1.000 - - - - si:dkey-57c22.1 [Source:ZFIN;Acc:ZDB-GENE-110914-164]
24. OVGP1 ENSDARG00000075745 6 1 - - - - 1.000 - - - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
25. FAM175B FAM175B 23 1 - - - - 1.000 - - - -
26. BRPF1 ENSDARG00000103665 10 1 - - - - 1.000 - - - - bromodomain and PHD finger containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-731]
27. sat2a ENSDARG00000036430, ENSDARG00000115169 0 1 - - - - 1.000 - - - - spermidine/spermine N1-acetyltransferase family member 2a [Source:ZFIN;Acc:ZDB-GENE-041212-21]
28. si:ch211-284f7.1 si:ch211-284f7.1 1 1 - - 1.000 - - - - - -
29. si:ch73-60g14.2 si:ch73-60g14.2 1 1 - - - - 1.000 - - - -
30. CABZ01102230.1 CABZ01102230.1 1 1 - - - - 1.000 - - - -
31. CU694385.1 CU694385.1 1 1 - - 1.000 - - - - - -
32. AL929092.1_1 ENSDARG00000092217 3 1 - - 1.000 - - - - - -
33. n6amt2 7 1 - - 1.000 - - - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
34. CABZ01076801.1 CABZ01076801.1 3 1 - - - - 1.000 - - - -
35. U1_15 U1_15 1 1 - - - - 1.000 - - - -
36. DXO ENSDARG00000036852 16 1 - - 1.000 - - - - - - decapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992]
37. CABZ01077220.1 ENSDARG00000088198 0 1 - - 1.000 - - - - - -
38. DIAPH2 ENSDARG00000076060 1 1 - - 1.000 - - - - - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
39. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
40. ZNF70 ZNF70 2 1 - - 1.000 - - - - - -
41. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1 - - - - 1.000 - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
42. nlgn4b 1 1 - - - - 1.000 - - - - neuroligin 4b, transcript variant X1
43. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - 1.000 - - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
44. srd5a2a ENSDARG00000043587 21 1 - - 1.000 - - - - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
45. SNORD12 SNORD12 1 1 - - 1.000 - - - - - -
46. TRPC7 TRPC7 1 1 - - - - 1.000 - - - -
47. si:dkey-15j16.3 ENSDARG00000042683 2 1 - - 1.000 - - - - - - si:dkey-15j16.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4680]
48. LRRC3C LRRC3C 0 1 - - 1.000 - - - - - -
49. wibg wibg 2 1 - - - - 1.000 - - - -
50. ca5 ca5 1 1 - - 1.000 - - - - - -
51. POLR2E POLR2E 1 1 - - 1.000 - - - - - -
52. si:ch73-383o19.2 si:ch73-383o19.2 3 1 - - 1.000 - - - - - -
53. fbxl8 ENSDARG00000054222 3 1 - - - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
54. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
55. myo7bb ENSDARG00000077201 7 1 - - 1.000 - - - - - - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
56. CABZ01030262.1 CABZ01030262.1 11 1 - - - - 1.000 - - - -
57. CABZ01088982.1 ENSDARG00000109259 0 1 - - - - 1.000 - - - -
58. loxl4 ENSDARG00000025089 5 1 - - - - 1.000 - - - - lysyl oxidase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080722-19]
59. si:ch211-281g2.3 si:ch211-281g2.3 1 1 - - 1.000 - - - - - -
60. dennd6aa ENSDARG00000030239 1 1 - - 1.000 - - - - - - DENN/MADD domain containing 6Aa [Source:ZFIN;Acc:ZDB-GENE-041010-63]
61. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - 1.000 - - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
62. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
63. acoxl ENSDARG00000020149 14 1 - - 1.000 - - - - - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
64. cd44a ENSDARG00000087863 4 1 - - - - 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
65. BX465848.1 ENSDARG00000114947 1 1 - - - - 1.000 - - - -
66. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 1 - - 1.000 - - - - - - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
67. BX569789.5 BX569789.5 0 1 - - - - 1.000 - - - -
68. MFAP4_5 MFAP4_5 4 1 - - 1.000 - - - - - -
69. taar14l ENSDARG00000069213 11 1 - - - - 1.000 - - - - trace amine associated receptor 14l [Source:ZFIN;Acc:ZDB-GENE-041014-31]
70. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
71. si:ch211-155e24.2 si:ch211-155e24.2 0 1 - - 1.000 - - - - - -
72. si:dkey-32n7.4 ENSDARG00000002956 3 1 - - 1.000 - - - - - - si:dkey-32n7.4 [Source:ZFIN;Acc:ZDB-GENE-110411-175]
73. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - - - - 1.000 - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
74. si:ch211-131e11.20 si:ch211-131e11.20 0 1 - - 1.000 - - - - - -
75. CABZ01024686.1 CABZ01024686.1 1 1 - - 1.000 - - - - - -
76. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
77. 5S_rRNA_29 5S_rRNA_29 0 1 - - - - 1.000 - - - -
78. SMU1 SMU1 3 1 - - 1.000 - - - - - -
79. CST7 CST7 22 1 - - - - 1.000 - - - -
80. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -
81. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
82. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
83. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - 1.000 - - - -
84. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
85. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
86. nsmfb ENSDARG00000101234 4 1 - - - - 1.000 - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor b [Source:ZFIN;Acc:ZDB-GENE-080603-4]
87. MCC ENSDARG00000105237 4 1 - - 1.000 - - - - - - MCC, WNT signaling pathway regulator [Source:ZFIN;Acc:ZDB-GENE-141210-1]
88. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - - 1.000 - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
89. il2rgb ENSDARG00000053702 0 1 - - 1.000 - - - - - - interleukin 2 receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-080402-2]
90. si:ch73-379f7.5 si:ch73-379f7.5 1 1 - - 1.000 - - - - - -
91. si:dkey-200l5.4 ENSDARG00000095294 13 1 - - 1.000 - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
92. BIN1 BIN1 11 1 - - - - 1.000 - - - -
93. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
94. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
95. abcd1 ENSDARG00000074876 6 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
96. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - - 1.000 - - - - - -
97. slc25a15a ENSDARG00000063539 50 1 - - 1.000 - - - - - - solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15a [Source:ZFIN;Acc:ZDB-GENE-070112-1072]
98. si:ch211-152f22.2 si:ch211-152f22.2 0 1 - - 1.000 - - - - - -
99. PEG3_26 PEG3_26 0 1 - - 1.000 - - - - - -
100. sh2d1ab ENSDARG00000074854, ENSDARG00000115149 0 1 - - - - 1.000 - - - - SH2 domain containing 1A duplicate b [Source:ZFIN;Acc:ZDB-GENE-091204-326]

There are 260 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA