Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for 5S_rRNA_5

Gene Name Gene ID Reads Annotation
5S_rRNA_5 5S_rRNA_5 1










Genes with expression patterns similar to 5S_rRNA_5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. 5S_rRNA_5 5S_rRNA_5 1 2 - - 1.000 - 1.000 - - - -
2. SMCHD1 ENSDARG00000104374 2 2 - - 1.000 - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
3. si:dkey-151m22.9 si:dkey-151m22.9 6 1.877 - - 1.000 - 0.877 - - - -
4. si:ch211-214p13.9 ENSDARG00000091411 2 1.755 - - 1.000 - 0.755 - - - - si:ch211-214p13.9 [Source:ZFIN;Acc:ZDB-GENE-060503-213]
5. ZNF70 ZNF70 2 1 - - 1.000 - - - - - -
6. creb5b ENSDARG00000070536 9 1 - - - - 1.000 - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
7. F13A1 F13A1 1 1 - - - - 1.000 - - - -
8. BX000442.2 BX000442.2 8 1 - - - - 1.000 - - - -
9. CR847893.4 CR847893.4 2 1 - - 1.000 - - - - - -
10. CR391962.2 CR391962.2 0 1 - - - - 1.000 - - - -
11. ftr12 ENSDARG00000053366, ENSDARG00000074118, ENSDARG00000113522 0 1 - - - - 1.000 - - - - finTRIM family, member 12 [Source:ZFIN;Acc:ZDB-GENE-070912-196]
12. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
13. AKNA_1 AKNA_1 2 1 - - 1.000 - - - - - -
14. CU694385.1 CU694385.1 1 1 - - 1.000 - - - - - -
15. zgc:162872 ENSDARG00000012184 1 1 - - - - 1.000 - - - - zgc:162872 [Source:ZFIN;Acc:ZDB-GENE-081022-1]
16. si:dkey-156j15.1 ENSDARG00000109821 1 1 - - 1.000 - - - - - - si:dkey-156j15.1 [Source:ZFIN;Acc:ZDB-GENE-110914-81]
17. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
18. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - 1.000 - - - - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
19. PEG3_8 PEG3_8 1 1 - - 1.000 - - - - - -
20. guca1c ENSDARG00000030758 9 1 - - 1.000 - - - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
21. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
22. si:ch211-281g2.3 si:ch211-281g2.3 1 1 - - 1.000 - - - - - -
23. CABZ01102230.1 CABZ01102230.1 1 1 - - - - 1.000 - - - -
24. si:ch211-15j21.2 si:ch211-15j21.2 13 1 - - 1.000 - - - - - -
25. tgm2b ENSDARG00000074094 1 1 - - 1.000 - - - - - - transglutaminase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2576]
26. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - 1.000 - - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
27. BIN1 BIN1 11 1 - - - - 1.000 - - - -
28. CABZ01079192.1 ENSDARG00000101629 23 1 - - 1.000 - - - - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
29. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
30. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
31. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -
32. si:dkey-27p18.6 4 1 - - - - 1.000 - - - - si:dkey-27p18.6, transcript variant X1
33. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
34. il7r ENSDARG00000078970 4 1 - - - - 1.000 - - - - interleukin 7 receptor [Source:ZFIN;Acc:ZDB-GENE-080110-7]
35. p2rx1 ENSDARG00000016695, ENSDARG00000110431 9 1 - - 1.000 - - - - - - purinergic receptor P2X, ligand-gated ion channel, 1 [Source:ZFIN;Acc:ZDB-GENE-030319-1]
36. ca5 ca5 1 1 - - 1.000 - - - - - -
37. CABZ01069012.1 CABZ01069012.1 0 1 - - 1.000 - - - - - -
38. rerglb ENSDARG00000054324, ENSDARG00000116048 14 1 - - 1.000 - - - - - - RERG/RAS-like b [Source:ZFIN;Acc:ZDB-GENE-040724-73]
39. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
40. si:ch73-289h5.3 si:ch73-289h5.3 9 1 - - - - 1.000 - - - -
41. fbxl8 ENSDARG00000054222 3 1 - - - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
42. si:dkey-153k10.6 10 1 - - 1.000 - - - - - - si:dkey-153k10.6, transcript variant X1
43. U1_18 U1_18 0 1 - - - - 1.000 - - - -
44. BX005082.1 ENSDARG00000098558 2 1 - - 1.000 - - - - - -
45. ido1 ENSDARG00000033594 0 1 - - - - 1.000 - - - - indoleamine 2,3-dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-080228-2]
46. CMYA5 ENSDARG00000061379 65 1 - - 1.000 - - - - - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
47. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
48. TRPC7 TRPC7 1 1 - - - - 1.000 - - - -
49. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
50. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 1 - - - - 1.000 - - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]
51. si:ch211-203k16.3 ENSDARG00000069305 21 1 - - 1.000 - - - - - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
52. nsmfb ENSDARG00000101234 4 1 - - - - 1.000 - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor b [Source:ZFIN;Acc:ZDB-GENE-080603-4]
53. wdr27 ENSDARG00000053386 2 1 - - - - 1.000 - - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
54. si:ch73-379f7.5 si:ch73-379f7.5 1 1 - - 1.000 - - - - - -
55. slc18b1 ENSDARG00000044047 7 1 - - - - 1.000 - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
56. SUSD1 ENSDARG00000058839 4 1 - - 1.000 - - - - - - sushi domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-169]
57. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
58. loxl4 ENSDARG00000025089 5 1 - - - - 1.000 - - - - lysyl oxidase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080722-19]
59. srd5a2a ENSDARG00000043587 21 1 - - 1.000 - - - - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
60. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
61. GABRR3 GABRR3 3 1 - - - - 1.000 - - - -
62. gzmk ENSDARG00000028780 1 1 - - 1.000 - - - - - - granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
63. SNORA62_1 SNORA62_1 1 1 - - 1.000 - - - - - -
64. socs7 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 7 1 - - - - 1.000 - - - - suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
65. U1_15 U1_15 1 1 - - - - 1.000 - - - -
66. si:ch211-284f7.1 si:ch211-284f7.1 1 1 - - 1.000 - - - - - -
67. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 1 - - 1.000 - - - - - - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
68. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
69. si:dkey-240n22.3 ENSDARG00000095013 0 1 - - - - 1.000 - - - - si:dkey-240n22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-409]
70. si:dkey-40i22.5 si:dkey-40i22.5 8 1 - - 1.000 - - - - - -
71. si:ch211-1f22.4 si:ch211-1f22.4 2 1 - - - - 1.000 - - - -
72. si:ch211-100p3.1 si:ch211-100p3.1 1 1 - - 1.000 - - - - - -
73. il2rgb ENSDARG00000053702 0 1 - - 1.000 - - - - - - interleukin 2 receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-080402-2]
74. si:dkeyp-20g2.3 ENSDARG00000093389, ENSDARG00000094279 1 1 - - - - 1.000 - - - - si:dkeyp-20g2.3 [Source:ZFIN;Acc:ZDB-GENE-070705-537]
75. rfx3 ENSDARG00000014550 2 1 - - - - 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
76. DIAPH2 ENSDARG00000076060 1 1 - - 1.000 - - - - - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
77. CABZ01088982.1 ENSDARG00000109259 0 1 - - - - 1.000 - - - -
78. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
79. tmem184b tmem184b 2 1 - - - - 1.000 - - - -
80. MFAP4_5 MFAP4_5 4 1 - - 1.000 - - - - - -
81. sat2a ENSDARG00000036430, ENSDARG00000115169 0 1 - - - - 1.000 - - - - spermidine/spermine N1-acetyltransferase family member 2a [Source:ZFIN;Acc:ZDB-GENE-041212-21]
82. gata4 ENSDARG00000098952 11 1 - - 1.000 - - - - - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
83. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
84. smchd1 ENSDARG00000104374 0 1 - - 1.000 - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
85. UBE2O 1 1 - - 1.000 - - - - - - ubiquitin-conjugating enzyme E2O
86. si:dkey-250k10.3 si:dkey-250k10.3 2 1 - - - - 1.000 - - - -
87. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
88. UNC80 ENSDARG00000098290 2 1 - - - - 1.000 - - - - unc-80 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-140106-167]
89. si:ch211-11i5.3 si:ch211-11i5.3 7 1 - - 1.000 - - - - - -
90. viml ENSDARG00000044501 5 1 - - 1.000 - - - - - - vimentin like [Source:ZFIN;Acc:ZDB-GENE-040426-1743]
91. si:dkey-57c22.1 ENSDARG00000093846 12 1 - - - - 1.000 - - - - si:dkey-57c22.1 [Source:ZFIN;Acc:ZDB-GENE-110914-164]
92. AKAP13 ENSDARG00000079994 1 1 - - 1.000 - - - - - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
93. SNORD12 SNORD12 1 1 - - 1.000 - - - - - -
94. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - - 1.000 - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
95. CR388163.4 CR388163.4 4 1 - - 1.000 - - - - - -
96. si:ch73-335d12.1 si:ch73-335d12.1 1 1 - - - - 1.000 - - - -
97. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
98. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
99. si:dkey-108f8.6 si:dkey-108f8.6 0 1 - - - - 1.000 - - - -
100. PEG3_26 PEG3_26 0 1 - - 1.000 - - - - - -

There are 260 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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