Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for 5S_rRNA_5

Gene Name Gene ID Reads Annotation
5S_rRNA_5 5S_rRNA_5 1










Genes with expression patterns similar to 5S_rRNA_5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SMCHD1 ENSDARG00000104374 2 2 - - 1.000 - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
2. 5S_rRNA_5 5S_rRNA_5 1 2 - - 1.000 - 1.000 - - - -
3. si:dkey-151m22.9 si:dkey-151m22.9 6 1.877 - - 1.000 - 0.877 - - - -
4. si:ch211-214p13.9 ENSDARG00000091411 2 1.755 - - 1.000 - 0.755 - - - - si:ch211-214p13.9 [Source:ZFIN;Acc:ZDB-GENE-060503-213]
5. CABZ01024686.1 CABZ01024686.1 1 1 - - 1.000 - - - - - -
6. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
7. ern2 ENSDARG00000058475 0 1 - - 1.000 - - - - - - endoplasmic reticulum to nucleus signaling 2 [Source:ZFIN;Acc:ZDB-GENE-090312-15]
8. taar14l ENSDARG00000069213 11 1 - - - - 1.000 - - - - trace amine associated receptor 14l [Source:ZFIN;Acc:ZDB-GENE-041014-31]
9. si:dkey-40i22.5 si:dkey-40i22.5 8 1 - - 1.000 - - - - - -
10. si:ch73-335d12.1 si:ch73-335d12.1 1 1 - - - - 1.000 - - - -
11. il2rgb ENSDARG00000053702 0 1 - - 1.000 - - - - - - interleukin 2 receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-080402-2]
12. CABZ01069012.1 CABZ01069012.1 0 1 - - 1.000 - - - - - -
13. si:ch211-11i5.3 si:ch211-11i5.3 7 1 - - 1.000 - - - - - -
14. CABZ01076801.1 CABZ01076801.1 3 1 - - - - 1.000 - - - -
15. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
16. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
17. nlgn4b 1 1 - - - - 1.000 - - - - neuroligin 4b, transcript variant X1
18. zgc:162872 ENSDARG00000012184 1 1 - - - - 1.000 - - - - zgc:162872 [Source:ZFIN;Acc:ZDB-GENE-081022-1]
19. si:dkey-237j11.3 ENSDARG00000094303 1 1 - - 1.000 - - - - - - si:dkey-237j11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-239]
20. CABZ01078849.1 CABZ01078849.1 0 1 - - 1.000 - - - - - -
21. SNORD12 SNORD12 1 1 - - 1.000 - - - - - -
22. sh2d1ab ENSDARG00000074854, ENSDARG00000115149 0 1 - - - - 1.000 - - - - SH2 domain containing 1A duplicate b [Source:ZFIN;Acc:ZDB-GENE-091204-326]
23. si:ch211-133d10.1 si:ch211-133d10.1 0 1 - - - - 1.000 - - - -
24. CT583625.1 ENSDARG00000093788 10 1 - - - - 1.000 - - - -
25. ZNF70 ZNF70 2 1 - - 1.000 - - - - - -
26. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
27. CABZ01038376.1 ENSDARG00000105038 0 1 - - 1.000 - - - - - -
28. SMU1 SMU1 3 1 - - 1.000 - - - - - -
29. CDH19 2 1 - - - - 1.000 - - - - cadherin 19, type 2, transcript variant X3
30. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
31. DOCK9 ENSDARG00000114086 3 1 - - 1.000 - - - - - - dedicator of cytokinesis 9 [Source:HGNC Symbol;Acc:HGNC:14132]
32. CU469509.2 CU469509.2 4 1 - - - - 1.000 - - - -
33. RECK ENSDARG00000090039 15 1 - - 1.000 - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
34. sat2a ENSDARG00000036430, ENSDARG00000115169 0 1 - - - - 1.000 - - - - spermidine/spermine N1-acetyltransferase family member 2a [Source:ZFIN;Acc:ZDB-GENE-041212-21]
35. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 1 - - - - 1.000 - - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]
36. KCNMB3 KCNMB3 5 1 - - - - 1.000 - - - -
37. si:ch211-203k16.3 ENSDARG00000069305 21 1 - - 1.000 - - - - - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
38. ODF2 ODF2 6 1 - - - - 1.000 - - - -
39. cdcp2 ENSDARG00000075866 0 1 - - - - 1.000 - - - - CUB domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-485]
40. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1 - - 1.000 - - - - - -
41. CABZ01079192.1 ENSDARG00000101629 23 1 - - 1.000 - - - - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
42. spata7 ENSDARG00000075898 16 1 - - 1.000 - - - - - - spermatogenesis associated 7 [Source:ZFIN;Acc:ZDB-GENE-050419-61]
43. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
44. CR790363.3 CR790363.3 5 1 - - 1.000 - - - - - -
45. CST7 CST7 22 1 - - - - 1.000 - - - -
46. rerglb ENSDARG00000054324, ENSDARG00000116048 14 1 - - 1.000 - - - - - - RERG/RAS-like b [Source:ZFIN;Acc:ZDB-GENE-040724-73]
47. CABZ01088982.1 ENSDARG00000109259 0 1 - - - - 1.000 - - - -
48. CU694385.1 CU694385.1 1 1 - - 1.000 - - - - - -
49. si:ch211-37p17.5 si:ch211-37p17.5 4 1 - - 1.000 - - - - - -
50. socs7 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 7 1 - - - - 1.000 - - - - suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
51. CR847893.4 CR847893.4 2 1 - - 1.000 - - - - - -
52. zgc:103559 ENSDARG00000038293 1 1 - - - - 1.000 - - - - zgc:103559 [Source:ZFIN;Acc:ZDB-GENE-041212-22]
53. si:ch1073-351l9.1 si:ch1073-351l9.1 1 1 - - - - 1.000 - - - -
54. BX511182.1 BX511182.1 8 1 - - 1.000 - - - - - -
55. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
56. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 1 - - 1.000 - - - - - - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
57. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - - - - 1.000 - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
58. si:ch73-383o19.2 si:ch73-383o19.2 3 1 - - 1.000 - - - - - -
59. CABZ01102230.1 CABZ01102230.1 1 1 - - - - 1.000 - - - -
60. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
61. TRPC7 TRPC7 1 1 - - - - 1.000 - - - -
62. si:ch211-1f22.4 si:ch211-1f22.4 2 1 - - - - 1.000 - - - -
63. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
64. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 1 - - - - 1.000 - - - - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
65. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - 1.000 - - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
66. si:ch211-113a14.26_1 5 1 - - 1.000 - - - - - - si:ch211-113a14.26
67. SNORA42 SNORA42 24 1 - - - - 1.000 - - - -
68. si:ch211-155d24.7 si:ch211-155d24.7 17 1 - - 1.000 - - - - - -
69. BRPF1 ENSDARG00000103665 10 1 - - - - 1.000 - - - - bromodomain and PHD finger containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-731]
70. ENSDARG00000075665 ENSDARG00000075665 5 1 - - 1.000 - - - - - -
71. CABZ01030262.1 CABZ01030262.1 11 1 - - - - 1.000 - - - -
72. LRRC3C LRRC3C 0 1 - - 1.000 - - - - - -
73. per1a ENSDARG00000056885 0 1 - - 1.000 - - - - - - period circadian clock 1a [Source:ZFIN;Acc:ZDB-GENE-011220-1]
74. cmpk2 ENSDARG00000031359 1 1 - - - - 1.000 - - - - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040724-24]
75. DXO ENSDARG00000036852 16 1 - - 1.000 - - - - - - decapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992]
76. ca5 ca5 1 1 - - 1.000 - - - - - -
77. U1_15 U1_15 1 1 - - - - 1.000 - - - -
78. phox2bb ENSDARG00000091029 2 1 - - 1.000 - - - - - - paired-like homeobox 2bb [Source:ZFIN;Acc:ZDB-GENE-050407-3]
79. UBE2O 1 1 - - 1.000 - - - - - - ubiquitin-conjugating enzyme E2O
80. nsmfb ENSDARG00000101234 4 1 - - - - 1.000 - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor b [Source:ZFIN;Acc:ZDB-GENE-080603-4]
81. POLR2E POLR2E 1 1 - - 1.000 - - - - - -
82. ido1 ENSDARG00000033594 0 1 - - - - 1.000 - - - - indoleamine 2,3-dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-080228-2]
83. BX465848.1 ENSDARG00000114947 1 1 - - - - 1.000 - - - -
84. si:ch73-289h5.3 si:ch73-289h5.3 9 1 - - - - 1.000 - - - -
85. si:busm1-180g5.7_1 si:busm1-180g5.7_1 0 1 - - 1.000 - - - - - -
86. TMEM241 ENSDARG00000090685 11 1 - - 1.000 - - - - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
87. U1_18 U1_18 0 1 - - - - 1.000 - - - -
88. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
89. crygs1 ENSDARG00000042992 45 1 - - - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
90. si:ch211-69k21.3 si:ch211-69k21.3 3 1 - - - - 1.000 - - - -
91. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
92. aldoca ENSDARG00000057661, ENSDARG00000111344 1 1 - - - - 1.000 - - - - aldolase C, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-050706-128]
93. ms4a17a.6 ENSDARG00000007018 6 1 - - 1.000 - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.6 [Source:ZFIN;Acc:ZDB-GENE-070209-265]
94. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - 1.000 - - - -
95. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 1 - - - - 1.000 - - - - low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
96. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
97. si:ch211-155e24.2 si:ch211-155e24.2 0 1 - - 1.000 - - - - - -
98. tenc1a tenc1a 3 1 - - 1.000 - - - - - -
99. si:dkey-222o15.4 si:dkey-222o15.4 4 1 - - - - 1.000 - - - -
100. ftr12 ENSDARG00000053366, ENSDARG00000074118, ENSDARG00000113522 0 1 - - - - 1.000 - - - - finTRIM family, member 12 [Source:ZFIN;Acc:ZDB-GENE-070912-196]

There are 260 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA