Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for 5S_rRNA_4

Gene Name Gene ID Reads Annotation
5S_rRNA_4 5S_rRNA_4 0










Genes with expression patterns similar to 5S_rRNA_4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1 - - - - - 1.000 - - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
2. zgc:153642 ENSDARG00000052900 0 1 - - - - - 1.000 - - - zgc:153642 [Source:ZFIN;Acc:ZDB-GENE-061013-527]
3. smad9 368 1 - - - - - 1.000 - - - SMAD family member 9, transcript variant X1
4. vip ENSDARG00000078247 10 1 - - - - - 1.000 - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
5. si:dkey-208k4.1 si:dkey-208k4.1 15 1 - - - - - 1.000 - - -
6. CABZ01048675.1 CABZ01048675.1 4 1 - - - - - 1.000 - - -
7. rab11bb_1 ENSDARG00000090086 7 1 - - - - - 1.000 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
8. mylkb ENSDARG00000004753 95 1 - - - - - 1.000 - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
9. 5S_rRNA_4 5S_rRNA_4 0 1 - - - - - 1.000 - - -
10. mir124-1 10 1 - - - - - 1.000 - - - microRNA 124-1
11. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - - - - 1.000 - - -
12. si:ch211-285d14.3 si:ch211-285d14.3 1 1 - - - - - 1.000 - - -
13. PLBD1 ENSDARG00000063313 1 1 - - - - - 1.000 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
14. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - - 1.000 - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
15. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - 1.000 - - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
16. CU861891.1 ENSDARG00000097162 0 1 - - - - - 1.000 - - -
17. efr3ba ENSDARG00000033516 19 1 - - - - - 1.000 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
18. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 - - - - - 1.000 - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
19. hsd17b2 ENSDARG00000045553 14 1 - - - - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-040928-1]
20. C6H3orf18 C6H3orf18 7 1 - - - - - 1.000 - - -
21. DKK3 DKK3 12 1 - - - - - 1.000 - - -
22. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - - - - - 1.000 - - -
23. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - - 1.000 - - -
24. PRDM12 PRDM12 133 1 - - - - - 1.000 - - -
25. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
26. TSPEAR TSPEAR 9 1 - - - - - 1.000 - - -
27. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - - - - 1.000 - - -
28. CABZ01060030.1 ENSDARG00000106579 55 1 - - - - - 1.000 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
29. cyp39a1 ENSDARG00000017982 4 1 - - - - - 1.000 - - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
30. ebi3 ENSDARG00000053620 5 1 - - - - - 1.000 - - - Epstein-Barr virus induced 3 [Source:ZFIN;Acc:ZDB-GENE-070912-615]
31. CABZ01061873.1 CABZ01061873.1 51 1 - - - - - 1.000 - - -
32. CABZ01079258.1 CABZ01079258.1 3 1 - - - - - 1.000 - - -
33. CU571066.3 CU571066.3 0 1 - - - - - 1.000 - - -
34. abcd1 ENSDARG00000074876 6 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
35. snx18b ENSDARG00000044246, ENSDARG00000110012 51 1 - - - - - 1.000 - - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
36. 5S_rRNA_19 5S_rRNA_19 1 1 - - - - - 1.000 - - -
37. CABZ01021435.3 CABZ01021435.3 5 1 - - - - - 1.000 - - -
38. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1 - - - - - 1.000 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
39. CR384075.2 CR384075.2 1 1 - - - - - 1.000 - - -
40. rbfox3l rbfox3l 34 1 - - - - - 1.000 - - -
41. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - - 1.000 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
42. si:ch211-145g9.7 32 1 - - - - - 1.000 - - - si:ch211-145g9.7, transcript variant X1
43. loxhd1b ENSDARG00000074638 6 1 - - - - - 1.000 - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
44. si:dkey-207j16.9 si:dkey-207j16.9 0 1 - - - - - 1.000 - - -
45. EXT1 EXT1 3 1 - - - - - 1.000 - - -
46. nupl2 ENSDARG00000029043 105 1 - - - - - 1.000 - - - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
47. v2rh9 ENSDARG00000056009 0 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h9 [Source:ZFIN;Acc:ZDB-GENE-050419-176]
48. ENSDARG00000091446 ENSDARG00000091446 239 1 - - - - - 1.000 - - -
49. CABZ01090303.1 CABZ01090303.1 2 1 - - - - - 1.000 - - -
50. si:rp71-7l19.7 si:rp71-7l19.7 1 1 - - - - - 1.000 - - -
51. CU929163.1 CU929163.1 11 1 - - - - - 1.000 - - -
52. ASAP1 ASAP1 47 1 - - - - - 1.000 - - -
53. BX649417.1 ENSDARG00000117387 1 1 - - - - - 1.000 - - -
54. CABZ01044611.1 CABZ01044611.1 8 1 - - - - - 1.000 - - -
55. zgc:114046 ENSDARG00000091728 68 1 - - - - - 1.000 - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
56. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - - 1.000 - - -
57. scpp8 ENSDARG00000093124 54 1 - - - - - 1.000 - - - secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
58. si:rp71-1c10.10 ENSDARG00000086255, ENSDARG00000109343 14 1 - - - - - 1.000 - - - si:rp71-1c10.10 [Source:ZFIN;Acc:ZDB-GENE-130603-55]
59. fam5b fam5b 45 1 - - - - - 1.000 - - -
60. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - - - - - 1.000 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
61. trhra ENSDARG00000076546 3 1 - - - - - 1.000 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
62. strip1 ENSDARG00000074084 0 1 - - - - - 1.000 - - - striatin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2927]
63. CABZ01021426.1 CABZ01021426.1 25 1 - - - - - 1.000 - - -
64. ppp1r9a ENSDARG00000061304 12 1 - - - - - 1.000 - - - protein phosphatase 1, regulatory subunit 9A [Source:ZFIN;Acc:ZDB-GENE-060503-660]
65. FAM163A_1 ENSDARG00000093021 6 1 - - - - - 1.000 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
66. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
67. si:ch73-155e10.1 si:ch73-155e10.1 13 1 - - - - - 1.000 - - -
68. si:ch211-285c6.2 ENSDARG00000079234 1 1 - - - - - 1.000 - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
69. ela3l ENSDARG00000007276 11 1 - - - - - 1.000 - - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
70. spo11 ENSDARG00000013837 7 1 - - - - - 1.000 - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
71. fam19a5 fam19a5 8 1 - - - - - 1.000 - - -
72. akt3a_1 ENSDARG00000104810 12 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
73. URB1_1 URB1_1 8 1 - - - - - 1.000 - - -
74. zgc:173702 ENSDARG00000110229 411 1 - - - - - 1.000 - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
75. CR753817.1 ENSDARG00000110927 26 1 - - - - - 1.000 - - -
76. MFAP4_4 MFAP4_4 9 1 - - - - - 1.000 - - -
77. KHNYN ENSDARG00000092488 10 1 - - - - - 1.000 - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
78. nr5a1b ENSDARG00000023362 54 1 - - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
79. TMEM241 ENSDARG00000090685 11 1 - - - - - 1.000 - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
80. mstnb ENSDARG00000069133 3 1 - - - - - 1.000 - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
81. UIMC1 200 1 - - - - - 1.000 - - - ubiquitin interaction motif containing 1
82. si:ch211-202h22.10 ENSDARG00000087290 13 1 - - - - - 1.000 - - - si:ch211-202h22.10 [Source:ZFIN;Acc:ZDB-GENE-110914-121]
83. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1 - - - - - 1.000 - - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
84. lct ENSDARG00000060671 4 1 - - - - - 1.000 - - - lactase [Source:ZFIN;Acc:ZDB-GENE-081104-434]
85. slc30a2 ENSDARG00000021305 4 1 - - - - - 1.000 - - - solute carrier family 30 (zinc transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-347]
86. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - - - - - 1.000 - - -
87. sat1b ENSDARG00000032272, ENSDARG00000112956 72 1 - - - - - 1.000 - - - spermidine/spermine N1-acetyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-041001-39]
88. tecpr1a ENSDARG00000062515 7 1 - - - - - 1.000 - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
89. TENM2 ENSDARG00000037122 48 1 - - - - - 1.000 - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
90. hoxc9a ENSDARG00000092809 18 1 - - - - - 1.000 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
91. BRSK2_2 BRSK2_2 3 1 - - - - - 1.000 - - -
92. rgs9bp ENSDARG00000009466 41 1 - - - - - 1.000 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
93. si:dkeyp-28d2.4 ENSDARG00000041828 0 1 - - - - - 1.000 - - - si:dkeyp-28d2.4 [Source:ZFIN;Acc:ZDB-GENE-091204-68]
94. dre-mir-196c dre-mir-196c 2 1 - - - - - 1.000 - - -
95. efemp2b_1 ENSDARG00000020811 77 1 - - - - - 1.000 - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
96. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - 1.000 - - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
97. si:dkey-47k20.3 ENSDARG00000029635 0 1 - - - - - 1.000 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
98. si:ch211-217k17.10 ENSDARG00000079345 4 1 - - - - - 1.000 - - - si:ch211-217k17.10 [Source:ZFIN;Acc:ZDB-GENE-030131-8827]
99. BX248582.3 BX248582.3 3 1 - - - - - 1.000 - - -
100. panx2 ENSDARG00000063019 3 1 - - - - - 1.000 - - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]

There are 211 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA