Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for 5S_rRNA_27

Gene Name Gene ID Reads Annotation
5S_rRNA_27 5S_rRNA_27 2










Genes with expression patterns similar to 5S_rRNA_27

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. 5S_rRNA_27 5S_rRNA_27 2 3 - - 1.000 - - - - 1.000 1.000
2. ABCD2 ENSDARG00000059409 1 2 - - 1.000 - - - - - 1.000 ATP-binding cassette, sub-family D (ALD), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-28]
3. ftr79 ENSDARG00000093972 1 2 - - 1.000 - - - - - 1.000 finTRIM family, member 79 [Source:ZFIN;Acc:ZDB-GENE-060126-4]
4. mmp16b ENSDARG00000058876 1 1.81 - - 0.943 - - - - - 0.867 matrix metallopeptidase 16b (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-061009-22]
5. im:7149628 im:7149628 10 1.655 - - 0.725 - - - - - 0.930
6. mcoln1b ENSDARG00000058848 3 1 - - 1.000 - - - - - - mucolipin 1b [Source:ZFIN;Acc:ZDB-GENE-130514-1]
7. crispld1a ENSDARG00000077275 7 1 - - 1.000 - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
8. gh1 ENSDARG00000038185 1 1 - - - - - - - - 1.000 growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
9. si:dkey-211i20.3 si:dkey-211i20.3 1 1 - - - - - - - - 1.000
10. josd1 ENSDARG00000071548, ENSDARG00000113255, ENSDARG00000115146 4 1 - - 1.000 - - - - - - Josephin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-260]
11. CR848032.2 CR848032.2 0 1 - - - - - - - - 1.000
12. or115-8 ENSDARG00000092406 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-10]
13. si:dkey-11n6.3 si:dkey-11n6.3 1 1 - - - - - - - - 1.000
14. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - - - - - - - - 1.000 POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
15. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - - - - - - 1.000
16. si:ch211-255f4.4 si:ch211-255f4.4 0 1 - - - - - - - - 1.000
17. si:ch211-161n3.4 ENSDARG00000045752 0 1 - - 1.000 - - - - - - si:ch211-161n3.4 [Source:ZFIN;Acc:ZDB-GENE-110913-46]
18. si:dkey-54j5.1 si:dkey-54j5.1 4 1 - - 1.000 - - - - - -
19. BX324003.4 BX324003.4 24 1 - - - - - - - - 1.000
20. slc12a5a ENSDARG00000075815 9 1 - - 1.000 - - - - - - solute carrier family 12 (potassium/chloride transporter), member 5a [Source:ZFIN;Acc:ZDB-GENE-120927-3]
21. zgc:173603 zgc:173603 2 1 - - - - - - - - 1.000
22. KSR1_1 KSR1_1 1 1 - - - - - - - - 1.000
23. VWDE ENSDARG00000103443 10 1 - - - - - - - - 1.000 von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
24. UBE2O 1 1 - - - - - - - - 1.000 ubiquitin-conjugating enzyme E2O
25. si:dkeyp-100a1.5 si:dkeyp-100a1.5 8 1 - - 1.000 - - - - - -
26. NLRC5 ENSDARG00000024631 11 1 - - 1.000 - - - - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
27. CR450785.2 ENSDARG00000111875 1 1 - - 1.000 - - - - - -
28. si:ch211-113a14.10 si:ch211-113a14.10 2 1 - - - - - - - - 1.000
29. si:dkey-208k22.1 si:dkey-208k22.1 1 1 - - - - - - - - 1.000
30. VOPP1 ENSDARG00000076373 12 1 - - 1.000 - - - - - - VOPP1, WBP1/VOPP1 family member [Source:ZFIN;Acc:ZDB-GENE-091204-64]
31. BX927122.1 ENSDARG00000100571 0 1 - - - - - - - - 1.000
32. si:dkey-247i3.5 ENSDARG00000096186 7 1 - - 1.000 - - - - - - si:dkey-247i3.5 [Source:ZFIN;Acc:ZDB-GENE-110914-32]
33. NCAM2 ENSDARG00000098523 2 1 - - 1.000 - - - - - - neural cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:7657]
34. si:ch211-93g21.1 ENSDARG00000093602 5 1 - - 1.000 - - - - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
35. zp2.3 ENSDARG00000090237 45 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-010622-2]
36. lratb 3 1 - - 1.000 - - - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
37. CU638740.4 CU638740.4 1 1 - - - - - - - - 1.000
38. tec ENSDARG00000098477 2 1 - - 1.000 - - - - - - tec protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-7499]
39. si:dkey-92j12.5 ENSDARG00000094677 5 1 - - 1.000 - - - - - - si:dkey-92j12.5 [Source:ZFIN;Acc:ZDB-GENE-090313-354]
40. si:dkey-29j8.4 si:dkey-29j8.4 17 1 - - 1.000 - - - - - -
41. BX088525.2 ENSDARG00000117222 11 1 - - - - - - - - 1.000
42. clec3ba ENSDARG00000076541 3 1 - - 1.000 - - - - - - C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
43. fam196ab 2 1 - - - - - - - - 1.000 family with sequence similarity 196, member Ab
44. syne2a_1 0 1 - - - - - - - - 1.000 spectrin repeat containing, nuclear envelope 2a
45. si:ch211-253d24.2 si:ch211-253d24.2 12 1 - - 1.000 - - - - - -
46. CR942805.1 CR942805.1 94 1 - - - - - - - - 1.000
47. si:ch73-119o17.1 si:ch73-119o17.1 6 1 - - - - - - - - 1.000
48. hel_dr4 hel_dr4 12 1 - - - - - - - - 1.000
49. brinp3b ENSDARG00000075352 14 1 - - 1.000 - - - - - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
50. si:ch211-89f22.1 si:ch211-89f22.1 11 1 - - - - - - - - 1.000
51. ptpn20 ENSDARG00000075459 1 1 - - 1.000 - - - - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
52. CLTCL1_2 CLTCL1_2 1 1 - - - - - - - - 1.000
53. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - - - - - - 1.000
54. NUGGC NUGGC 9 1 - - - - - - - - 1.000
55. si:dkey-43f9.1_1 si:dkey-43f9.1_1 3 1 - - - - - - - - 1.000
56. SIGLEC15 SIGLEC15 10 1 - - - - - - - - 1.000
57. si:dkey-241l7.2 ENSDARG00000105335 6 1 - - - - - - - - 1.000 si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]
58. ush2a ENSDARG00000029482 10 1 - - 1.000 - - - - - - Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
59. dnajc5b ENSDARG00000058147 6 1 - - 1.000 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
60. dnajb1b ENSDARG00000041394 25 1 - - - - - - - - 1.000 DnaJ (Hsp40) homolog, subfamily B, member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5455]
61. si:ch211-231i17.4 ENSDARG00000094903 2 1 - - 1.000 - - - - - - si:ch211-231i17.4 [Source:ZFIN;Acc:ZDB-GENE-110914-104]
62. si:dkey-47k16.3 si:dkey-47k16.3 17 1 - - - - - - - - 1.000
63. nkain2 ENSDARG00000069427 0 1 - - 1.000 - - - - - - sodium/potassium transporting ATPase interacting 2 [Source:ZFIN;Acc:ZDB-GENE-041014-77]
64. 5S_rRNA_13 5S_rRNA_13 0 1 - - 1.000 - - - - - -
65. U11 U11 11 1 - - - - - - - - 1.000
66. CABZ01023424.1 CABZ01023424.1 0 1 - - 1.000 - - - - - -
67. gabrr1 ENSDARG00000043902 1 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
68. tdrd6 ENSDARG00000070052 1 1 - - - - - - - - 1.000 tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
69. si:dkey-88l16.3 ENSDARG00000094055 0 1 - - - - - - - - 1.000 si:dkey-88l16.3 [Source:ZFIN;Acc:ZDB-GENE-030131-6015]
70. C6H22orf23 C6H22orf23 15 1 - - - - - - - - 1.000
71. PRKCA_1 ENSDARG00000099841 12 1 - - 1.000 - - - - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
72. pcdh1a4 0 1 - - 1.000 - - - - - - protocadherin 1 alpha 4
73. si:ch211-222b21.3 si:ch211-222b21.3 2 1 - - - - - - - - 1.000
74. si:dkey-149m13.4 ENSDARG00000114536 2 1 - - 1.000 - - - - - - si:dkey-149m13.4 [Source:ZFIN;Acc:ZDB-GENE-110914-34]
75. taar13d ENSDARG00000110650 0 1 - - - - - - - - 1.000 trace amine associated receptor 13d [Source:ZFIN;Acc:ZDB-GENE-041014-62]
76. U1_45 U1_45 0 1 - - 1.000 - - - - - -
77. zgc:136639os zgc:136639os 2 1 - - 1.000 - - - - - -
78. si:ch73-111e15.1 ENSDARG00000008182 2 1 - - 1.000 - - - - - - si:ch73-111e15.1 [Source:ZFIN;Acc:ZDB-GENE-110411-28]
79. zbtb32 ENSDARG00000073726 1 1 - - - - - - - - 1.000 zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
80. BX511182.1 BX511182.1 8 1 - - - - - - - - 1.000
81. fam101a 4 1 - - - - - - - - 1.000 family with sequence similarity 101, member A
82. zgc:92658 8 1 - - - - - - - - 1.000 zgc:92658
83. shank3a ENSDARG00000063332 5 1 - - 1.000 - - - - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
84. FCHO1 ENSDARG00000015356 2 1 - - 1.000 - - - - - - FCH domain only 1 [Source:ZFIN;Acc:ZDB-GENE-120613-1]
85. si:dkey-81i14.3 si:dkey-81i14.3 1 1 - - - - - - - - 1.000
86. si:ch211-169j7.3 si:ch211-169j7.3 4 1 - - - - - - - - 1.000
87. LPHN2_1 LPHN2_1 3 1 - - - - - - - - 1.000
88. GPX2 ENSDARG00000089149 10 1 - - 1.000 - - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
89. ENSDARG00000088328 ENSDARG00000088328 2 1 - - - - - - - - 1.000
90. htr2a htr2a 1 1 - - - - - - - - 1.000
91. CABZ01085177.1 ENSDARG00000104644 6 1 - - 1.000 - - - - - - transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]
92. slc26a4 ENSDARG00000069431 2 1 - - 1.000 - - - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
93. mfi2 224 1 - - 1.000 - - - - - - antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5, transcript variant X2
94. si:ch211-196c10.13 ENSDARG00000096756 28 1 - - - - - - - - 1.000 si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
95. plp1b ENSDARG00000011929 8 1 - - - - - - - - 1.000 proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]
96. si:dkey-222o15.3 si:dkey-222o15.3 3 1 - - - - - - - - 1.000
97. esyt1b ENSDARG00000014239 8 1 - - 1.000 - - - - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
98. C11H1orf116 C11H1orf116 9 1 - - 1.000 - - - - - -
99. si:ch211-131e11.14 si:ch211-131e11.14 7 1 - - - - - - - - 1.000
100. SNORA53 SNORA53 10 1 - - - - - - - - 1.000

There are 255 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA