Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for 5S_rRNA_27

Gene Name Gene ID Reads Annotation
5S_rRNA_27 5S_rRNA_27 2










Genes with expression patterns similar to 5S_rRNA_27

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. 5S_rRNA_27 5S_rRNA_27 2 3 - - 1.000 - - - - 1.000 1.000
2. ABCD2 ENSDARG00000059409 1 2 - - 1.000 - - - - - 1.000 ATP-binding cassette, sub-family D (ALD), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-28]
3. ftr79 ENSDARG00000093972 1 2 - - 1.000 - - - - - 1.000 finTRIM family, member 79 [Source:ZFIN;Acc:ZDB-GENE-060126-4]
4. mmp16b ENSDARG00000058876 1 1.81 - - 0.943 - - - - - 0.867 matrix metallopeptidase 16b (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-061009-22]
5. im:7149628 im:7149628 10 1.655 - - 0.725 - - - - - 0.930
6. brinp3b ENSDARG00000075352 14 1 - - 1.000 - - - - - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
7. C11H1orf116 C11H1orf116 9 1 - - 1.000 - - - - - -
8. COL18A1 COL18A1 0 1 - - - - - - - - 1.000
9. si:dkey-176f19.5 si:dkey-176f19.5 10 1 - - - - - - - - 1.000
10. si:ch211-227e10.2 ENSDARG00000100414 1 1 - - - - - - - - 1.000 si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8]
11. ush2a ENSDARG00000029482 10 1 - - 1.000 - - - - - - Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
12. si:dkey-60a16.4 si:dkey-60a16.4 14 1 - - 1.000 - - - - - -
13. si:ch211-220f16.1 ENSDARG00000093977 4 1 - - - - - - - - 1.000 si:ch211-220f16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-198]
14. zgc:173603 zgc:173603 2 1 - - - - - - - - 1.000
15. htr2a htr2a 1 1 - - - - - - - - 1.000
16. PLEKHD1 ENSDARG00000091349 0 1 - - 1.000 - - - - - - pleckstrin homology domain containing, family D (with coiled-coil domains) member 1 [Source:ZFIN;Acc:ZDB-GENE-130926-1]
17. zgc:113343 ENSDARG00000103196 2 1 - - - - - - - - 1.000 zgc:113343 [Source:ZFIN;Acc:ZDB-GENE-050327-90]
18. si:dkey-13d5.1 si:dkey-13d5.1 3 1 - - 1.000 - - - - - -
19. nkain2 ENSDARG00000069427 0 1 - - 1.000 - - - - - - sodium/potassium transporting ATPase interacting 2 [Source:ZFIN;Acc:ZDB-GENE-041014-77]
20. ptpn20 ENSDARG00000075459 1 1 - - 1.000 - - - - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
21. si:dkeyp-35e5.5 ENSDARG00000104026 3 1 - - 1.000 - - - - - - si:dkeyp-35e5.5 [Source:ZFIN;Acc:ZDB-GENE-050420-335]
22. mcoln1b ENSDARG00000058848 3 1 - - 1.000 - - - - - - mucolipin 1b [Source:ZFIN;Acc:ZDB-GENE-130514-1]
23. crtac1b ENSDARG00000102517 0 1 - - 1.000 - - - - - - cartilage acidic protein 1b [Source:ZFIN;Acc:ZDB-GENE-090312-28]
24. LPHN2_1 LPHN2_1 3 1 - - - - - - - - 1.000
25. zgc:136639os zgc:136639os 2 1 - - 1.000 - - - - - -
26. CMA1_8 CMA1_8 10 1 - - - - - - - - 1.000
27. si:dkey-284p5.3 ENSDARG00000095638 4 1 - - 1.000 - - - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
28. si:dkey-81i14.3 si:dkey-81i14.3 1 1 - - - - - - - - 1.000
29. BX004980.1 ENSDARG00000099680 10 1 - - - - - - - - 1.000
30. si:ch211-113a14.10 si:ch211-113a14.10 2 1 - - - - - - - - 1.000
31. BX088525.2 ENSDARG00000117222 11 1 - - - - - - - - 1.000
32. CU694320.1 CU694320.1 6 1 - - - - - - - - 1.000
33. si:dkey-247i3.5 ENSDARG00000096186 7 1 - - 1.000 - - - - - - si:dkey-247i3.5 [Source:ZFIN;Acc:ZDB-GENE-110914-32]
34. SNORD46 SNORD46 0 1 - - - - - - - - 1.000
35. BX324142.2 ENSDARG00000117006 1 1 - - - - - - - - 1.000
36. xpnpep2 ENSDARG00000026017 16 1 - - 1.000 - - - - - - X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound [Source:ZFIN;Acc:ZDB-GENE-040426-1151]
37. cga ENSDARG00000040479 3 1 - - - - - - - - 1.000 glycoprotein hormones, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040715-2]
38. si:ch211-131e11.14 si:ch211-131e11.14 7 1 - - - - - - - - 1.000
39. hel_dr4 hel_dr4 12 1 - - - - - - - - 1.000
40. prop1 ENSDARG00000039756, ENSDARG00000109950, ENSDARG00000114449 10 1 - - - - - - - - 1.000 PROP paired-like homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-081107-40]
41. syne2a_1 0 1 - - - - - - - - 1.000 spectrin repeat containing, nuclear envelope 2a
42. kcnk15 ENSDARG00000077371 1 1 - - - - - - - - 1.000 potassium channel, subfamily K, member 15 [Source:ZFIN;Acc:ZDB-GENE-080220-30]
43. PRKCA_1 ENSDARG00000099841 12 1 - - 1.000 - - - - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
44. mespba ENSDARG00000030347, ENSDARG00000110553 1 1 - - 1.000 - - - - - - mesoderm posterior ba [Source:ZFIN;Acc:ZDB-GENE-000406-9]
45. si:ch211-161n3.4 ENSDARG00000045752 0 1 - - 1.000 - - - - - - si:ch211-161n3.4 [Source:ZFIN;Acc:ZDB-GENE-110913-46]
46. CR854923.1 CR854923.1 18 1 - - 1.000 - - - - - -
47. CABZ01023424.1 CABZ01023424.1 0 1 - - 1.000 - - - - - -
48. shank3a ENSDARG00000063332 5 1 - - 1.000 - - - - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
49. CU468684.1 CU468684.1 1 1 - - 1.000 - - - - - -
50. ppp1r14c_1 ENSDARG00000077341 3 1 - - 1.000 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
51. CR388416.3 CR388416.3 1 1 - - - - - - - - 1.000
52. si:dkeyp-104h9.7 si:dkeyp-104h9.7 0 1 - - 1.000 - - - - - -
53. gh1 ENSDARG00000038185 1 1 - - - - - - - - 1.000 growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
54. NUGGC NUGGC 9 1 - - - - - - - - 1.000
55. crhr1 ENSDARG00000003989 5 1 - - 1.000 - - - - - - corticotropin releasing hormone receptor 1 [Source:ZFIN;Acc:ZDB-GENE-081231-1]
56. si:dkeyp-100a1.5 si:dkeyp-100a1.5 8 1 - - 1.000 - - - - - -
57. tnfrsfa ENSDARG00000004451 4 1 - - - - - - - - 1.000 tumor necrosis factor receptor superfamily, member a [Source:ZFIN;Acc:ZDB-GENE-010802-1]
58. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - - - - - - - - 1.000 POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
59. NLRC5 ENSDARG00000024631 11 1 - - 1.000 - - - - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
60. BX950868.2 ENSDARG00000104423 4 1 - - 1.000 - - - - - -
61. C6H22orf23 C6H22orf23 15 1 - - - - - - - - 1.000
62. si:dkey-149m13.4 ENSDARG00000114536 2 1 - - 1.000 - - - - - - si:dkey-149m13.4 [Source:ZFIN;Acc:ZDB-GENE-110914-34]
63. si:ch73-111e15.1 ENSDARG00000008182 2 1 - - 1.000 - - - - - - si:ch73-111e15.1 [Source:ZFIN;Acc:ZDB-GENE-110411-28]
64. si:ch211-253d24.2 si:ch211-253d24.2 12 1 - - 1.000 - - - - - -
65. CR936408.1 ENSDARG00000078938 15 1 - - - - - - - - 1.000 uncharacterized LOC799523 [Source:NCBI gene;Acc:799523]
66. CABZ01033205.2 CABZ01033205.2 5 1 - - - - - - - - 1.000
67. BX927122.1 ENSDARG00000100571 0 1 - - - - - - - - 1.000
68. spry1 ENSDARG00000103985 0 1 - - - - - - - - 1.000 sprouty homolog 1, antagonist of FGF signaling (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-081215-2]
69. guca1e ENSDARG00000101567 2 1 - - 1.000 - - - - - - guanylate cyclase activator 1e [Source:ZFIN;Acc:ZDB-GENE-040426-1577]
70. ENSDARG00000087581 ENSDARG00000087581 2 1 - - 1.000 - - - - - -
71. or115-8 ENSDARG00000092406 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-10]
72. si:dkey-47k16.4 ENSDARG00000113005 87 1 - - 1.000 - - - - - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
73. zbtb32 ENSDARG00000073726 1 1 - - - - - - - - 1.000 zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
74. zgc:92658 8 1 - - - - - - - - 1.000 zgc:92658
75. C8H20orf112 C8H20orf112 1 1 - - - - - - - - 1.000
76. si:ch211-169j7.3 si:ch211-169j7.3 4 1 - - - - - - - - 1.000
77. BX004879.1 BX004879.1 0 1 - - 1.000 - - - - - -
78. l3mbtl3 ENSDARG00000025983 12 1 - - - - - - - - 1.000 l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
79. SYNGAP1 SYNGAP1 4 1 - - 1.000 - - - - - -
80. NUDT13 ENSDARG00000057417, ENSDARG00000115835 5 1 - - - - - - - - 1.000 nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
81. si:dkey-33i11.1 ENSDARG00000053027 2 1 - - 1.000 - - - - - - si:dkey-33i11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4630]
82. ENSDARG00000088726 ENSDARG00000088726 0 1 - - - - - - - - 1.000
83. SRCIN1 SRCIN1 5 1 - - 1.000 - - - - - -
84. CRYGM4 ENSDARG00000008219 1 1 - - - - - - - - 1.000 crystallin, gamma M4 [Source:ZFIN;Acc:ZDB-GENE-120312-2]
85. wu:fe37d09 wu:fe37d09 0 1 - - 1.000 - - - - - -
86. si:dkey-89j23.3 si:dkey-89j23.3 9 1 - - 1.000 - - - - - -
87. RPS11 ENSDARG00000053058 32 1 - - - - - - - - 1.000 ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
88. si:ch211-178j18.2 si:ch211-178j18.2 1 1 - - - - - - - - 1.000
89. U1_45 U1_45 0 1 - - 1.000 - - - - - -
90. ATG7 ENSDARG00000102893 1 1 - - - - - - - - 1.000 ATG7 autophagy related 7 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1633]
91. UBE2O 1 1 - - - - - - - - 1.000 ubiquitin-conjugating enzyme E2O
92. OLFM4 OLFM4 6 1 - - 1.000 - - - - - -
93. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - - - - - 1.000
94. si:ch211-255f4.4 si:ch211-255f4.4 0 1 - - - - - - - - 1.000
95. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1 - - - - - - - - 1.000 guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
96. si:ch211-207c6.4 si:ch211-207c6.4 7 1 - - 1.000 - - - - - -
97. uts2b ENSDARG00000017340 0 1 - - - - - - - - 1.000 urotensin 2, beta [Source:ZFIN;Acc:ZDB-GENE-040630-10]
98. ca4a ENSDARG00000043589 1 1 - - - - - - - - 1.000 carbonic anhydrase IV a [Source:ZFIN;Acc:ZDB-GENE-080204-85]
99. RNF151 ENSDARG00000075046, ENSDARG00000115743 3 1 - - 1.000 - - - - - - ring finger protein 151 [Source:ZFIN;Acc:ZDB-GENE-121214-234]
100. ENSDARG00000089102 ENSDARG00000089102 1 1 - - 1.000 - - - - - -

There are 255 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA