Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for 5S_rRNA_27

Gene Name Gene ID Reads Annotation
5S_rRNA_27 5S_rRNA_27 2










Genes with expression patterns similar to 5S_rRNA_27

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. 5S_rRNA_27 5S_rRNA_27 2 3 - - 1.000 - - - - 1.000 1.000
2. ftr79 ENSDARG00000093972 1 2 - - 1.000 - - - - - 1.000 finTRIM family, member 79 [Source:ZFIN;Acc:ZDB-GENE-060126-4]
3. ABCD2 ENSDARG00000059409 1 2 - - 1.000 - - - - - 1.000 ATP-binding cassette, sub-family D (ALD), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-28]
4. mmp16b ENSDARG00000058876 1 1.81 - - 0.943 - - - - - 0.867 matrix metallopeptidase 16b (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-061009-22]
5. im:7149628 im:7149628 10 1.655 - - 0.725 - - - - - 0.930
6. si:dkey-30h14.3 si:dkey-30h14.3 1 1 - - 1.000 - - - - - -
7. si:ch211-201o1.1 ENSDARG00000088689 1 1 - - - - - - - - 1.000 si:ch211-201o1.1 [Source:ZFIN;Acc:ZDB-GENE-120709-60]
8. CABZ01080599.1 ENSDARG00000111801 0 1 - - 1.000 - - - - - - uncharacterized LOC101885127 [Source:NCBI gene;Acc:101885127]
9. BX004879.1 BX004879.1 0 1 - - 1.000 - - - - - -
10. crhr1 ENSDARG00000003989 5 1 - - 1.000 - - - - - - corticotropin releasing hormone receptor 1 [Source:ZFIN;Acc:ZDB-GENE-081231-1]
11. CR388416.3 CR388416.3 1 1 - - - - - - - - 1.000
12. si:dkey-149m13.4 ENSDARG00000114536 2 1 - - 1.000 - - - - - - si:dkey-149m13.4 [Source:ZFIN;Acc:ZDB-GENE-110914-34]
13. si:ch211-39i19.5 si:ch211-39i19.5 6 1 - - 1.000 - - - - - -
14. si:ch211-113a14.10 si:ch211-113a14.10 2 1 - - - - - - - - 1.000
15. si:dkey-222o15.3 si:dkey-222o15.3 3 1 - - - - - - - - 1.000
16. CR936408.1 ENSDARG00000078938 15 1 - - - - - - - - 1.000 uncharacterized LOC799523 [Source:NCBI gene;Acc:799523]
17. zgc:173603 zgc:173603 2 1 - - - - - - - - 1.000
18. 5S_rRNA_13 5S_rRNA_13 0 1 - - 1.000 - - - - - -
19. dnajc5b ENSDARG00000058147 6 1 - - 1.000 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
20. si:ch73-366i20.1 ENSDARG00000092949 0 1 - - 1.000 - - - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
21. si:dkey-199m13.1 si:dkey-199m13.1 3 1 - - - - - - - - 1.000
22. si:dkey-11d20.4 si:dkey-11d20.4 6 1 - - 1.000 - - - - - -
23. si:ch211-178j18.2 si:ch211-178j18.2 1 1 - - - - - - - - 1.000
24. si:dkey-13d5.1 si:dkey-13d5.1 3 1 - - 1.000 - - - - - -
25. BX927318.2 BX927318.2 5 1 - - 1.000 - - - - - -
26. BX000442.2 BX000442.2 8 1 - - - - - - - - 1.000
27. si:ch211-207c6.4 si:ch211-207c6.4 7 1 - - 1.000 - - - - - -
28. slc12a5a ENSDARG00000075815 9 1 - - 1.000 - - - - - - solute carrier family 12 (potassium/chloride transporter), member 5a [Source:ZFIN;Acc:ZDB-GENE-120927-3]
29. CU468684.1 CU468684.1 1 1 - - 1.000 - - - - - -
30. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - - - - - - - - 1.000 POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
31. si:ch211-262n1.5 12 1 - - 1.000 - - - - - - si:ch211-262n1.5
32. si:dkey-208k22.1 si:dkey-208k22.1 1 1 - - - - - - - - 1.000
33. zp2.3 ENSDARG00000090237 45 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-010622-2]
34. BX927122.1 ENSDARG00000100571 0 1 - - - - - - - - 1.000
35. KSR1_1 KSR1_1 1 1 - - - - - - - - 1.000
36. RPS11 ENSDARG00000053058 32 1 - - - - - - - - 1.000 ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
37. si:ch211-161n3.4 ENSDARG00000045752 0 1 - - 1.000 - - - - - - si:ch211-161n3.4 [Source:ZFIN;Acc:ZDB-GENE-110913-46]
38. CABZ01023424.1 CABZ01023424.1 0 1 - - 1.000 - - - - - -
39. si:ch73-366i20.1_1 ENSDARG00000092949 1 1 - - 1.000 - - - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
40. SRCIN1 SRCIN1 5 1 - - 1.000 - - - - - -
41. mespba ENSDARG00000030347, ENSDARG00000110553 1 1 - - 1.000 - - - - - - mesoderm posterior ba [Source:ZFIN;Acc:ZDB-GENE-000406-9]
42. UBE2O 1 1 - - - - - - - - 1.000 ubiquitin-conjugating enzyme E2O
43. LPHN2_1 LPHN2_1 3 1 - - - - - - - - 1.000
44. ENSDARG00000089102 ENSDARG00000089102 1 1 - - 1.000 - - - - - -
45. asah2 ENSDARG00000012829 13 1 - - - - - - - - 1.000 N-acylsphingosine amidohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-041112-1]
46. si:ch211-222b21.3 si:ch211-222b21.3 2 1 - - - - - - - - 1.000
47. CABZ01085177.1 ENSDARG00000104644 6 1 - - 1.000 - - - - - - transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]
48. CT025894.1 CT025894.1 0 1 - - - - - - - - 1.000
49. CR848032.2 CR848032.2 0 1 - - - - - - - - 1.000
50. SNORA53 SNORA53 10 1 - - - - - - - - 1.000
51. UIMC1 200 1 - - 1.000 - - - - - - ubiquitin interaction motif containing 1
52. VWDE ENSDARG00000103443 10 1 - - - - - - - - 1.000 von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
53. mif4gdb ENSDARG00000102578 31 1 - - - - - - - - 1.000 MIF4G domain containing b [Source:ZFIN;Acc:ZDB-GENE-050227-7]
54. si:dkey-20d21.6 si:dkey-20d21.6 0 1 - - 1.000 - - - - - -
55. RNF151 ENSDARG00000075046, ENSDARG00000115743 3 1 - - 1.000 - - - - - - ring finger protein 151 [Source:ZFIN;Acc:ZDB-GENE-121214-234]
56. si:dkey-60a16.4 si:dkey-60a16.4 14 1 - - 1.000 - - - - - -
57. BX088525.2 ENSDARG00000117222 11 1 - - - - - - - - 1.000
58. pcdh1a4 0 1 - - 1.000 - - - - - - protocadherin 1 alpha 4
59. BX511182.1 BX511182.1 8 1 - - - - - - - - 1.000
60. ppp1r14c_1 ENSDARG00000077341 3 1 - - 1.000 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
61. prop1 ENSDARG00000039756, ENSDARG00000109950, ENSDARG00000114449 10 1 - - - - - - - - 1.000 PROP paired-like homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-081107-40]
62. mfi2 224 1 - - 1.000 - - - - - - antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5, transcript variant X2
63. DYDC2 ENSDARG00000101848 2 1 - - - - - - - - 1.000 DPY30 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-121030-3]
64. gh1 ENSDARG00000038185 1 1 - - - - - - - - 1.000 growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
65. SCARNA15 SCARNA15 1 1 - - 1.000 - - - - - -
66. si:ch211-231i17.4 ENSDARG00000094903 2 1 - - 1.000 - - - - - - si:ch211-231i17.4 [Source:ZFIN;Acc:ZDB-GENE-110914-104]
67. fam101a 4 1 - - - - - - - - 1.000 family with sequence similarity 101, member A
68. SP5 SP5 8 1 - - - - - - - - 1.000
69. zp2.2 ENSDARG00000105346 23 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-010622-1]
70. cd28 ENSDARG00000095070 0 1 - - - - - - - - 1.000 CD28 molecule [Source:ZFIN;Acc:ZDB-GENE-070912-128]
71. FMN1 ENSDARG00000011975 2 1 - - 1.000 - - - - - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
72. uts2b ENSDARG00000017340 0 1 - - - - - - - - 1.000 urotensin 2, beta [Source:ZFIN;Acc:ZDB-GENE-040630-10]
73. zgc:92658 8 1 - - - - - - - - 1.000 zgc:92658
74. CABZ01079009.1 CABZ01079009.1 1 1 - - 1.000 - - - - - -
75. si:dkey-265e15.2 ENSDARG00000089582, ENSDARG00000113391 1 1 - - - - - - - - 1.000 si:dkey-265e15.2 [Source:ZFIN;Acc:ZDB-GENE-081103-3]
76. si:ch211-93g21.1 ENSDARG00000093602 5 1 - - 1.000 - - - - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
77. NUDT13 ENSDARG00000057417, ENSDARG00000115835 5 1 - - - - - - - - 1.000 nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
78. mcoln1b ENSDARG00000058848 3 1 - - 1.000 - - - - - - mucolipin 1b [Source:ZFIN;Acc:ZDB-GENE-130514-1]
79. BX324142.2 ENSDARG00000117006 1 1 - - - - - - - - 1.000
80. si:dkey-88l16.3 ENSDARG00000094055 0 1 - - - - - - - - 1.000 si:dkey-88l16.3 [Source:ZFIN;Acc:ZDB-GENE-030131-6015]
81. COL18A1 COL18A1 0 1 - - - - - - - - 1.000
82. si:ch211-253d24.2 si:ch211-253d24.2 12 1 - - 1.000 - - - - - -
83. PRKCA_1 ENSDARG00000099841 12 1 - - 1.000 - - - - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
84. si:dkey-241l7.2 ENSDARG00000105335 6 1 - - - - - - - - 1.000 si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]
85. CABZ01073118.1 CABZ01073118.1 1 1 - - - - - - - - 1.000
86. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1 - - - - - - - - 1.000
87. tec ENSDARG00000098477 2 1 - - 1.000 - - - - - - tec protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-7499]
88. frmd7 ENSDARG00000068958 1 1 - - 1.000 - - - - - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
89. si:dkey-33i11.1 ENSDARG00000053027 2 1 - - 1.000 - - - - - - si:dkey-33i11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4630]
90. si:ch211-197k17.3 ENSDARG00000096214 2 1 - - - - - - - - 1.000 si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]
91. pcdh2g16 1 1 - - 1.000 - - - - - - protocadherin 2 gamma 16
92. BX088603.2 ENSDARG00000099595 2 1 - - 1.000 - - - - - -
93. CABZ01079541.1 CABZ01079541.1 0 1 - - 1.000 - - - - - -
94. si:dkey-92j12.5 ENSDARG00000094677 5 1 - - 1.000 - - - - - - si:dkey-92j12.5 [Source:ZFIN;Acc:ZDB-GENE-090313-354]
95. si:ch211-131e11.14 si:ch211-131e11.14 7 1 - - - - - - - - 1.000
96. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - - - - - - 1.000
97. OTUD7A ENSDARG00000045556 1 1 - - 1.000 - - - - - - OTU deubiquitinase 7A [Source:HGNC Symbol;Acc:HGNC:20718]
98. syne2a_1 0 1 - - - - - - - - 1.000 spectrin repeat containing, nuclear envelope 2a
99. BX950868.2 ENSDARG00000104423 4 1 - - 1.000 - - - - - -
100. spry1 ENSDARG00000103985 0 1 - - - - - - - - 1.000 sprouty homolog 1, antagonist of FGF signaling (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-081215-2]

There are 255 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA