Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for 5S_rRNA_27

Gene Name Gene ID Reads Annotation
5S_rRNA_27 5S_rRNA_27 2










Genes with expression patterns similar to 5S_rRNA_27

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. 5S_rRNA_27 5S_rRNA_27 2 3 - - 1.000 - - - - 1.000 1.000
2. ftr79 ENSDARG00000093972 1 2 - - 1.000 - - - - - 1.000 finTRIM family, member 79 [Source:ZFIN;Acc:ZDB-GENE-060126-4]
3. ABCD2 ENSDARG00000059409 1 2 - - 1.000 - - - - - 1.000 ATP-binding cassette, sub-family D (ALD), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-28]
4. mmp16b ENSDARG00000058876 1 1.81 - - 0.943 - - - - - 0.867 matrix metallopeptidase 16b (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-061009-22]
5. im:7149628 im:7149628 10 1.655 - - 0.725 - - - - - 0.930
6. CR382372.1 ENSDARG00000096684 2 1 - - 1.000 - - - - - - si:dkeyp-122d12.1 [Source:NCBI gene;Acc:101885973]
7. lhfpl4b ENSDARG00000076943 0 1 - - - - - - - - 1.000 LHFPL tetraspan subfamily member 4b [Source:ZFIN;Acc:ZDB-GENE-110216-4]
8. CABZ01079009.1 CABZ01079009.1 1 1 - - 1.000 - - - - - -
9. si:ch73-249k16.3 si:ch73-249k16.3 3 1 - - 1.000 - - - - - -
10. LRRC52 ENSDARG00000090698 1 1 - - 1.000 - - - - - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
11. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - - - - - - 1.000
12. BX936443.2 BX936443.2 28 1 - - 1.000 - - - - - -
13. CABZ01079541.1 CABZ01079541.1 0 1 - - 1.000 - - - - - -
14. zp2.3 ENSDARG00000090237 45 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-010622-2]
15. GPX2 ENSDARG00000089149 10 1 - - 1.000 - - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
16. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1 - - - - - - - - 1.000
17. lratb 3 1 - - 1.000 - - - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
18. CU571315.2 ENSDARG00000101956 15 1 - - - - - - - - 1.000
19. fam196ab 2 1 - - - - - - - - 1.000 family with sequence similarity 196, member Ab
20. CABZ01080599.1 ENSDARG00000111801 0 1 - - 1.000 - - - - - - uncharacterized LOC101885127 [Source:NCBI gene;Acc:101885127]
21. si:dkey-211i20.3 si:dkey-211i20.3 1 1 - - - - - - - - 1.000
22. mif4gdb ENSDARG00000102578 31 1 - - - - - - - - 1.000 MIF4G domain containing b [Source:ZFIN;Acc:ZDB-GENE-050227-7]
23. si:ch211-231i17.4 ENSDARG00000094903 2 1 - - 1.000 - - - - - - si:ch211-231i17.4 [Source:ZFIN;Acc:ZDB-GENE-110914-104]
24. CABZ01033130.1 CABZ01033130.1 5 1 - - - - - - - - 1.000
25. FCHO1 ENSDARG00000015356 2 1 - - 1.000 - - - - - - FCH domain only 1 [Source:ZFIN;Acc:ZDB-GENE-120613-1]
26. zgc:172051 ENSDARG00000086569 12 1 - - - - - - - - 1.000 zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
27. vetz 12 1 - - - - - - - - 1.000 vezatin, adherens junctions transmembrane protein, transcript variant X2
28. si:dkey-30h14.3 si:dkey-30h14.3 1 1 - - 1.000 - - - - - -
29. ENSDARG00000088328 ENSDARG00000088328 2 1 - - - - - - - - 1.000
30. zp2.2 ENSDARG00000105346 23 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-010622-1]
31. si:dkey-54j5.1 si:dkey-54j5.1 4 1 - - 1.000 - - - - - -
32. si:dkey-92j12.5 ENSDARG00000094677 5 1 - - 1.000 - - - - - - si:dkey-92j12.5 [Source:ZFIN;Acc:ZDB-GENE-090313-354]
33. tec ENSDARG00000098477 2 1 - - 1.000 - - - - - - tec protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-7499]
34. si:ch73-366i20.1_1 ENSDARG00000092949 1 1 - - 1.000 - - - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
35. slc12a5a ENSDARG00000075815 9 1 - - 1.000 - - - - - - solute carrier family 12 (potassium/chloride transporter), member 5a [Source:ZFIN;Acc:ZDB-GENE-120927-3]
36. si:dkey-47k16.3 si:dkey-47k16.3 17 1 - - - - - - - - 1.000
37. si:ch211-233m11.1 ENSDARG00000074653 1 1 - - 1.000 - - - - - - si:ch211-233m11.1 [Source:ZFIN;Acc:ZDB-GENE-081028-16]
38. si:ch211-15o14.2 si:ch211-15o14.2 6 1 - - - - - - - - 1.000
39. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - - - - - - 1.000
40. BX005234.1 ENSDARG00000097761 3 1 - - - - - - - - 1.000
41. pcdh2g16 1 1 - - 1.000 - - - - - - protocadherin 2 gamma 16
42. gabrr1 ENSDARG00000043902 1 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
43. si:dkey-88l16.3 ENSDARG00000094055 0 1 - - - - - - - - 1.000 si:dkey-88l16.3 [Source:ZFIN;Acc:ZDB-GENE-030131-6015]
44. SCARNA15 SCARNA15 1 1 - - 1.000 - - - - - -
45. KSR1_1 KSR1_1 1 1 - - - - - - - - 1.000
46. si:dkey-222o15.3 si:dkey-222o15.3 3 1 - - - - - - - - 1.000
47. CR848032.2 CR848032.2 0 1 - - - - - - - - 1.000
48. si:ch73-366i20.1 ENSDARG00000092949 0 1 - - 1.000 - - - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
49. CU638740.4 CU638740.4 1 1 - - - - - - - - 1.000
50. si:ch211-93g21.1 ENSDARG00000093602 5 1 - - 1.000 - - - - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
51. asah2 ENSDARG00000012829 13 1 - - - - - - - - 1.000 N-acylsphingosine amidohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-041112-1]
52. cd28 ENSDARG00000095070 0 1 - - - - - - - - 1.000 CD28 molecule [Source:ZFIN;Acc:ZDB-GENE-070912-128]
53. pcdh1a4 0 1 - - 1.000 - - - - - - protocadherin 1 alpha 4
54. CABZ01085177.1 ENSDARG00000104644 6 1 - - 1.000 - - - - - - transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]
55. DYDC2 ENSDARG00000101848 2 1 - - - - - - - - 1.000 DPY30 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-121030-3]
56. dnajb1b ENSDARG00000041394 25 1 - - - - - - - - 1.000 DnaJ (Hsp40) homolog, subfamily B, member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5455]
57. SDR16C5 SDR16C5 34 1 - - - - - - - - 1.000
58. SP5 SP5 8 1 - - - - - - - - 1.000
59. si:dkey-29j8.4 si:dkey-29j8.4 17 1 - - 1.000 - - - - - -
60. si:dkey-208k22.1 si:dkey-208k22.1 1 1 - - - - - - - - 1.000
61. esyt1b ENSDARG00000014239 8 1 - - 1.000 - - - - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
62. si:dkey-265e15.2 ENSDARG00000089582, ENSDARG00000113391 1 1 - - - - - - - - 1.000 si:dkey-265e15.2 [Source:ZFIN;Acc:ZDB-GENE-081103-3]
63. CR388013.1 CR388013.1 3 1 - - - - - - - - 1.000
64. INTS5 ENSDARG00000077943 0 1 - - - - - - - - 1.000 integrator complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-090908-2]
65. pde5ab ENSDARG00000051915 18 1 - - 1.000 - - - - - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
66. BX511182.1 BX511182.1 8 1 - - - - - - - - 1.000
67. VOPP1 ENSDARG00000076373 12 1 - - 1.000 - - - - - - VOPP1, WBP1/VOPP1 family member [Source:ZFIN;Acc:ZDB-GENE-091204-64]
68. crispld1a ENSDARG00000077275 7 1 - - 1.000 - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
69. BX000442.2 BX000442.2 8 1 - - - - - - - - 1.000
70. U11 U11 11 1 - - - - - - - - 1.000
71. taar13d ENSDARG00000110650 0 1 - - - - - - - - 1.000 trace amine associated receptor 13d [Source:ZFIN;Acc:ZDB-GENE-041014-62]
72. si:ch211-201o1.1 ENSDARG00000088689 1 1 - - - - - - - - 1.000 si:ch211-201o1.1 [Source:ZFIN;Acc:ZDB-GENE-120709-60]
73. SYDE1 ENSDARG00000077440 4 1 - - - - - - - - 1.000 synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
74. si:ch211-284e13.9 ENSDARG00000093214 2 1 - - - - - - - - 1.000 si:ch211-284e13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-164]
75. C14H11orf80 C14H11orf80 1 1 - - - - - - - - 1.000
76. CABZ01073118.1 CABZ01073118.1 1 1 - - - - - - - - 1.000
77. si:ch211-222b21.3 si:ch211-222b21.3 2 1 - - - - - - - - 1.000
78. tdrd6 ENSDARG00000070052 1 1 - - - - - - - - 1.000 tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
79. SNORA62_1 SNORA62_1 1 1 - - - - - - - - 1.000
80. si:ch211-39i19.5 si:ch211-39i19.5 6 1 - - 1.000 - - - - - -
81. CT025894.1 CT025894.1 0 1 - - - - - - - - 1.000
82. josd1 ENSDARG00000071548, ENSDARG00000113255, ENSDARG00000115146 4 1 - - 1.000 - - - - - - Josephin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-260]
83. ldlrad4 ldlrad4 0 1 - - - - - - - - 1.000
84. 5S_rRNA_13 5S_rRNA_13 0 1 - - 1.000 - - - - - -
85. CR942805.1 CR942805.1 94 1 - - - - - - - - 1.000
86. VWDE ENSDARG00000103443 10 1 - - - - - - - - 1.000 von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
87. prg4a ENSDARG00000010482 10 1 - - 1.000 - - - - - - proteoglycan 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8295]
88. BX088603.2 ENSDARG00000099595 2 1 - - 1.000 - - - - - -
89. clec3ba ENSDARG00000076541 3 1 - - 1.000 - - - - - - C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
90. NCAM2 ENSDARG00000098523 2 1 - - 1.000 - - - - - - neural cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:7657]
91. si:dkey-199m13.1 si:dkey-199m13.1 3 1 - - - - - - - - 1.000
92. SNORA53 SNORA53 10 1 - - - - - - - - 1.000
93. si:ch211-262n1.5 12 1 - - 1.000 - - - - - - si:ch211-262n1.5
94. mfi2 224 1 - - 1.000 - - - - - - antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5, transcript variant X2
95. AL929092.3 AL929092.3 0 1 - - 1.000 - - - - - -
96. BX927318.2 BX927318.2 5 1 - - 1.000 - - - - - -
97. si:ch211-197k17.3 ENSDARG00000096214 2 1 - - - - - - - - 1.000 si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]
98. si:dkey-11n6.3 si:dkey-11n6.3 1 1 - - - - - - - - 1.000
99. dnajc5b ENSDARG00000058147 6 1 - - 1.000 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
100. OTUD7A ENSDARG00000045556 1 1 - - 1.000 - - - - - - OTU deubiquitinase 7A [Source:HGNC Symbol;Acc:HGNC:20718]

There are 255 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA