Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for 5S_rRNA_22

Gene Name Gene ID Reads Annotation
5S_rRNA_22 5S_rRNA_22 45










Genes with expression patterns similar to 5S_rRNA_22

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. 5S_rRNA_22 5S_rRNA_22 45 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. si:ch73-257c13.2 ENSDARG00000074305 197 2.506 0.850 0.793 - - - 0.863 - - - si:ch73-257c13.2 [Source:ZFIN;Acc:ZDB-GENE-081104-269]
3. crygn1 ENSDARG00000102129 23 2.459 - - - 0.740 - 0.763 0.956 - - crystallin, gamma N1 [Source:ZFIN;Acc:ZDB-GENE-050225-1]
4. si:dkey-274m14.3 si:dkey-274m14.3 7 1.91 1.000 - - - - 0.910 - - -
5. cnn1b ENSDARG00000102398 40 1.844 1.000 - 0.844 - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
6. BX465203.2 BX465203.2 23 1.8 - - - 0.967 - 0.833 - - -
7. BEGAIN BEGAIN 39 1.798 1.000 - - - - - 0.798 - -
8. si:dkey-199m13.8 si:dkey-199m13.8 61 1.798 1.000 - - - - - 0.798 - -
9. si:ch211-113a14.26_1 5 1.772 1.000 - - - - - - 0.772 - si:ch211-113a14.26
10. odf3l2 36 1.761 1.000 - - 0.761 - - - - - outer dense fiber of sperm tails 3-like 2
11. METTL15 ENSDARG00000089236 39 1.749 - 0.883 - - - 0.866 - - - methyltransferase like 15 [Source:ZFIN;Acc:ZDB-GENE-130530-958]
12. si:dkey-228i19.32 si:dkey-228i19.32 9 1.741 1.000 0.741 - - - - - - -
13. CABZ01053592.1 ENSDARG00000117388 6 1.741 1.000 0.741 - - - - - - -
14. COX5B ENSDARG00000015978 70 1.741 1.000 0.741 - - - - - - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
15. lrrc9 ENSDARG00000054352 25 1.735 - - - - - 0.854 0.881 - - leucine rich repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-080917-56]
16. C20H8orf82 C20H8orf82 91 1.725 0.854 - - - - - - - 0.871
17. si:ch211-198c19.3 ENSDARG00000095533 5 1.724 - - - 0.926 - - 0.798 - - si:ch211-198c19.3 [Source:ZFIN;Acc:ZDB-GENE-100922-226]
18. bend3 ENSDARG00000076903 320 1.711 0.795 0.916 - - - - - - - BEN domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-090312-181]
19. si:dkey-258p11.1 si:dkey-258p11.1 48 1.708 - - - - - 0.910 0.798 - -
20. gpr19 ENSDARG00000102226 17 1.666 - - - - - - 0.798 - 0.868 G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
21. inpp5jb ENSDARG00000093359 4 1.651 - 0.741 - - - 0.910 - - - inositol polyphosphate-5-phosphatase Jb [Source:ZFIN;Acc:ZDB-GENE-081104-46]
22. cnr1 ENSDARG00000009020 33 1.634 0.802 0.832 - - - - - - - cannabinoid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040312-3]
23. si:dkey-100n10.2 101 1.63 0.782 - - - - - 0.848 - - si:dkey-100n10.2
24. JMJD1C JMJD1C 289 1.625 - 0.858 - - - - 0.767 - -
25. ADM ADM 122 1.619 - - - - - 0.910 0.709 - -
26. SGSM1_1 SGSM1_1 40 1.612 0.854 - - - - - 0.758 - -
27. rtn4rl1b ENSDARG00000098528 31 1.608 - 0.782 - - - - - - 0.826 reticulon 4 receptor-like 1b [Source:ZFIN;Acc:ZDB-GENE-040310-3]
28. nphp4 ENSDARG00000069014 77 1.604 - - - 0.857 - - 0.747 - - nephronophthisis 4 [Source:ZFIN;Acc:ZDB-GENE-060503-715]
29. KCNJ3 KCNJ3 24 1.595 0.854 0.741 - - - - - - -
30. MCF2L2 ENSDARG00000079742 52 1.595 0.893 - - - - - 0.702 - - MCF.2 cell line derived transforming sequence-like 2 [Source:ZFIN;Acc:ZDB-GENE-100812-1]
31. ccne1 ENSDARG00000098622, ENSDARG00000113492 161 1.588 - 0.769 - - - - 0.819 - - cyclin E1 [Source:ZFIN;Acc:ZDB-GENE-980526-168]
32. trim24 ENSDARG00000103350 431 1.587 0.813 - - - - - - - 0.774 tripartite motif containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-5913]
33. KCNA1 KCNA1 268 1.586 - 0.871 - - - - 0.715 - -
34. runx3 ENSDARG00000052826 247 1.581 0.824 - - - - - 0.757 - - runt-related transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-000605-2]
35. CABZ01015475.1 ENSDARG00000104841 6 1.57 - - - - - - 0.798 0.772 - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
36. nek4 ENSDARG00000040152 147 1.563 0.779 - - - - - 0.784 - - NIMA-related kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1392]
37. fzd9b ENSDARG00000014673, ENSDARG00000116739 155 1.558 0.802 - - - - - 0.756 - - frizzled class receptor 9b [Source:ZFIN;Acc:ZDB-GENE-000906-4]
38. med18 ENSDARG00000041237 247 1.552 - 0.736 - - - - 0.816 - - mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1276]
39. evx2 ENSDARG00000059255 317 1.543 0.802 0.741 - - - - - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
40. 5S_rRNA_6 5S_rRNA_6 11 1.543 0.802 0.741 - - - - - - -
41. wu:fd60c08 wu:fd60c08 35 1.542 - 0.744 - - - - 0.798 - -
42. tbc1d22b ENSDARG00000026988 18 1.539 - 0.741 - - - - 0.798 - - TBC1 domain family, member 22B [Source:ZFIN;Acc:ZDB-GENE-091118-28]
43. slc9a3.1 ENSDARG00000058498 46 1.534 - 0.779 - - - 0.755 - - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060503-545]
44. gaa ENSDARG00000090714 19 1.533 - - - - - 0.735 0.798 - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
45. QDPR QDPR 11 1.517 - - - - - 0.745 - 0.772 -
46. ttc23 ENSDARG00000022160 101 1.516 0.780 - - - - 0.736 - - - tetratricopeptide repeat domain 23 [Source:ZFIN;Acc:ZDB-GENE-050419-126]
47. blf ENSDARG00000043126 433 1.498 - 0.719 - - - - 0.779 - - bloody fingers [Source:ZFIN;Acc:ZDB-GENE-050721-1]
48. he1a 48624 1.481 - 0.741 - - - - 0.740 - - hatching enzyme 1a, transcript variant X1
49. si:ch211-264f5.2 ENSDARG00000078547 12 1.476 - 0.741 - - - 0.735 - - - si:ch211-264f5.2 [Source:ZFIN;Acc:ZDB-GENE-080303-2]
50. zgc:158654 19 1.476 - - - - - 0.770 0.706 - - zgc:158654, transcript variant X1
51. zgc:66443 ENSDARG00000057707 624 1.469 - - - - - - 0.742 - 0.727 zgc:66443 [Source:ZFIN;Acc:ZDB-GENE-040426-2945]
52. grk4 ENSDARG00000070448 146 1.455 0.741 - - - - 0.714 - - - G protein-coupled receptor kinase 4 [Source:ZFIN;Acc:ZDB-GENE-060929-1198]
53. nek2 ENSDARG00000005619 273 1.442 0.712 - - - - - 0.730 - - NIMA-related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-752]
54. psmc3ip ENSDARG00000037892 214 1.44 - - - - - - 0.739 - 0.701 PSMC3 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040625-125]
55. si:dkey-15h8.14 si:dkey-15h8.14 139 1.44 - 0.739 - - - 0.701 - - -
56. oxr1b ENSDARG00000063310 929 1.439 0.717 0.722 - - - - - - - oxidation resistance 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2438]
57. BX914198.1 BX914198.1 5 1 1.000 - - - - - - - -
58. chst2b ENSDARG00000058585 33 1 1.000 - - - - - - - - carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b [Source:ZFIN;Acc:ZDB-GENE-060720-33]
59. CABZ01076817.1 CABZ01076817.1 4 1 1.000 - - - - - - - -
60. BX088646.1 BX088646.1 34 1 - - - - - - 1.000 - -
61. CABZ01059406.1 ENSDARG00000088775 1 1 1.000 - - - - - - - -
62. PGBD4 ENSDARG00000079328 20 1 1.000 - - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
63. LPHN1_1 LPHN1_1 7 1 1.000 - - - - - - - -
64. FUT9 FUT9 91 1 1.000 - - - - - - - -
65. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1 1.000 - - - - - - - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
66. CABZ01021454.2 CABZ01021454.2 3 1 1.000 - - - - - - - -
67. nosip ENSDARG00000037958, ENSDARG00000112335 59 1 1.000 - - - - - - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
68. CABZ01073736.1 ENSDARG00000099438 81 1 1.000 - - - - - - - -
69. ptprc ENSDARG00000071437 104 1 1.000 - - - - - - - - protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
70. CSMD1 CSMD1 15 1 1.000 - - - - - - - -
71. s100t ENSDARG00000055589 453 1 1.000 - - - - - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
72. zgc:77118 ENSDARG00000014208, ENSDARG00000093176 63 1 1.000 - - - - - - - - zgc:77118 [Source:ZFIN;Acc:ZDB-GENE-040426-2211]
73. ZNF337_9 ZNF337_9 18 1 1.000 - - - - - - - -
74. si:dkey-66n24.2 si:dkey-66n24.2 69 1 1.000 - - - - - - - -
75. TRIM14_4 TRIM14_4 2 1 1.000 - - - - - - - -
76. zgc:101731 ENSDARG00000040965 27 1 1.000 - - - - - - - - zgc:101731 [Source:ZFIN;Acc:ZDB-GENE-040912-57]
77. KCNJ3_1 KCNJ3_1 30 1 1.000 - - - - - - - -
78. AL929291.1 AL929291.1 16 1 1.000 - - - - - - - -
79. shank2 ENSDARG00000062325 66 1 1.000 - - - - - - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
80. C13H10orf53 C13H10orf53 3 1 1.000 - - - - - - - -
81. rccd1_1 ENSDARG00000071074 24 1 1.000 - - - - - - - - RCC1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3552]
82. lppr5b lppr5b 23 1 1.000 - - - - - - - -
83. CABZ01084273.1 CABZ01084273.1 16 1 1.000 - - - - - - - -
84. kcng4 kcng4 37 1 1.000 - - - - - - - -
85. grm6b ENSDARG00000025671, ENSDARG00000117152 118 1 1.000 - - - - - - - - glutamate receptor, metabotropic 6b [Source:ZFIN;Acc:ZDB-GENE-021120-2]
86. FP236631.1 FP236631.1 3 1 1.000 - - - - - - - -
87. CR524483.1 ENSDARG00000109248 86 1 1.000 - - - - - - - - si:dkey-151p21.7 [Source:NCBI gene;Acc:562936]
88. dync1i2b ENSDARG00000103195 46 1 1.000 - - - - - - - - dynein, cytoplasmic 1, intermediate chain 2b [Source:ZFIN;Acc:ZDB-GENE-090121-1]
89. si:dkey-17e6.2 si:dkey-17e6.2 72 1 1.000 - - - - - - - -
90. si:dkey-65b12.12 ENSDARG00000094458 26 1 1.000 - - - - - - - - si:dkey-65b12.12 [Source:ZFIN;Acc:ZDB-GENE-060526-325]
91. yod1 ENSDARG00000008542 56 1 1.000 - - - - - - - - YOD1 deubiquitinase [Source:ZFIN;Acc:ZDB-GENE-050417-217]
92. jakmip2 ENSDARG00000053547 32 1 1.000 - - - - - - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
93. rtn4r ENSDARG00000090035 46 1 1.000 - - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
94. BICD1 BICD1 9 1 1.000 - - - - - - - -
95. CABZ01021433.1 ENSDARG00000105696 74 1 1.000 - - - - - - - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
96. paqr5a ENSDARG00000041145, ENSDARG00000115247 38 1 1.000 - - - - - - - - progestin and adipoQ receptor family member Va [Source:ZFIN;Acc:ZDB-GENE-040426-867]
97. npffr2.1 npffr2.1 60 1 1.000 - - - - - - - -
98. zgc:174694 zgc:174694 2 1 1.000 - - - - - - - -
99. si:ch73-29c22.1 ENSDARG00000090948 5 1 1.000 - - - - - - - - si:ch73-29c22.1 [Source:ZFIN;Acc:ZDB-GENE-091204-309]
100. si:ch211-14g4.4 si:ch211-14g4.4 6 1 1.000 - - - - - - - -

There are 1327 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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