Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for 5S_rRNA_18

Gene Name Gene ID Reads Annotation
5S_rRNA_18 5S_rRNA_18 270










Genes with expression patterns similar to 5S_rRNA_18

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. 5S_rRNA_18 5S_rRNA_18 270 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ogfrl2 ENSDARG00000024815, ENSDARG00000111132 74 2.441 0.877 - - - 0.806 - 0.758 - - opioid growth factor receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-030616-523]
3. b2m ENSDARG00000053136 215 1.77 0.851 - - 0.919 - - - - - beta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88]
4. ncbp2 ENSDARG00000014898 232 1.748 - - - 0.917 - - 0.831 - - nuclear cap binding protein subunit 2 [Source:ZFIN;Acc:ZDB-GENE-020419-31]
5. otof otof 127 1.742 - - - 0.940 - 0.802 - - -
6. GPR4 ENSDARG00000079479 92 1.714 0.751 - - 0.963 - - - - - G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-101202-1]
7. zgc:153733 ENSDARG00000110325, ENSDARG00000111744, ENSDARG00000114452 176 1.704 - - - 0.955 - - 0.749 - - zgc:153733 [Source:ZFIN;Acc:ZDB-GENE-060825-273]
8. fam5b fam5b 45 1.696 0.845 - - - - - 0.851 - -
9. gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 1.675 - - - 0.971 - - 0.704 - - general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
10. zgc:174651 zgc:174651 90 1.665 - - - - 0.775 - 0.890 - -
11. amn1 ENSDARG00000070478, ENSDARG00000111705 72 1.658 0.701 - - 0.957 - - - - - antagonist of mitotic exit network 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-13]
12. mtfr2 ENSDARG00000060394 482 1.645 - - - 0.808 - - 0.837 - - mitochondrial fission regulator 2 [Source:ZFIN;Acc:ZDB-GENE-061013-398]
13. si:busm1-180g5.7 si:busm1-180g5.7 15 1.636 0.880 - - - - - 0.756 - -
14. zgc:136254 ENSDARG00000068465 27 1.636 0.880 - - - - - 0.756 - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
15. sat1b ENSDARG00000032272, ENSDARG00000112956 72 1.613 0.820 0.793 - - - - - - - spermidine/spermine N1-acetyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-041001-39]
16. cbx8b ENSDARG00000098771, ENSDARG00000110903, ENSDARG00000114315 455 1.6 - - - 0.748 - - 0.852 - - chromobox homolog 8b [Source:ZFIN;Acc:ZDB-GENE-050522-325]
17. zgc:175214 ENSDARG00000022891 1013 1.599 - - - 0.870 - - 0.729 - - zgc:175214 [Source:ZFIN;Acc:ZDB-GENE-080303-32]
18. ssh2b ENSDARG00000098955 614 1.583 - - - 0.809 - - 0.774 - - slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]
19. YIPF7 YIPF7 189 1.577 0.770 - - 0.807 - - - - -
20. AIFM2 ENSDARG00000077549 1419 1.576 - - - 0.746 - - 0.830 - - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
21. esrrga ENSDARG00000004861 805 1.568 - - - 0.814 - - 0.754 - - estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
22. lpcat2 ENSDARG00000053010 137 1.568 0.845 - - - - - 0.723 - - lysophosphatidylcholine acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-229]
23. otx2 766 1.563 0.801 - - - - - 0.762 - - orthodenticle homeobox 2, transcript variant X2
24. scarb1 ENSDARG00000101557 503 1.554 - 0.768 - 0.786 - - - - - scavenger receptor class B, member 1 [Source:ZFIN;Acc:ZDB-GENE-031126-1]
25. ENSDARG00000095341 ENSDARG00000095341 488 1.544 - - - 0.823 - - 0.721 - -
26. pigs ENSDARG00000017813 718 1.535 - - - - - - 0.800 0.735 - phosphatidylinositol glycan anchor biosynthesis, class S [Source:ZFIN;Acc:ZDB-GENE-060929-436]
27. vipr2 ENSDARG00000012353, ENSDARG00000111580, ENSDARG00000115849 485 1.53 0.748 - - - 0.782 - - - - vasoactive intestinal peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-010406-4]
28. ndufaf2 ENSDARG00000069286, ENSDARG00000114828 1563 1.515 0.710 - - - - - 0.805 - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-040808-28]
29. SUOX ENSDARG00000091574 122 1.508 - - - - 0.756 - 0.752 - - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
30. glra1 ENSDARG00000012019 315 1.502 - - 0.729 - 0.773 - - - - glycine receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991117-1]
31. cryzl1 ENSDARG00000026902 401 1.498 - - - 0.777 0.721 - - - - crystallin, zeta (quinone reductase)-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-378]
32. CU570791.5 CU570791.5 872 1.493 - - - - - - 0.770 0.723 -
33. zgc:91985 zgc:91985 1517 1.48 - - - 0.756 - - 0.724 - -
34. CABZ01024770.1 CABZ01024770.1 150 1.477 0.751 - - - - - 0.726 - -
35. ptprga ENSDARG00000045006 719 1.475 - - - 0.766 - - 0.709 - - protein tyrosine phosphatase, receptor type, g a [Source:ZFIN;Acc:ZDB-GENE-101101-4]
36. TRHDE_1 TRHDE_1 102 1.466 0.715 - - - - - 0.751 - -
37. RAPH1 RAPH1 294 1.462 0.711 - 0.751 - - - - - -
38. PLEKHG3 72 0.979 - - - 0.979 - - - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
39. cyp2x6 ENSDARG00000079653, ENSDARG00000111425 33 0.976 - - - 0.976 - - - - - cytochrome P450, family 2, subfamily X, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-050320-144]
40. GMIP ENSDARG00000077249 43 0.975 - - - 0.975 - - - - - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
41. zgc:154054 ENSDARG00000099923 19 0.974 - - - 0.974 - - - - - zgc:154054 [Source:ZFIN;Acc:ZDB-GENE-061103-283]
42. zgc:110353 ENSDARG00000039443 80 0.973 - - - 0.973 - - - - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
43. zgc:173652 22 0.972 - - - 0.972 - - - - - zgc:173652
44. arhgap22 ENSDARG00000021255 117 0.972 - - - 0.972 - - - - - Rho GTPase activating protein 22 [Source:ZFIN;Acc:ZDB-GENE-090313-87]
45. PHLDB2_1 PHLDB2_1 316 0.971 - - - 0.971 - - - - -
46. nlgn3b ENSDARG00000062376 171 0.971 - - - 0.971 - - - - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
47. klhl36 ENSDARG00000030251, ENSDARG00000113095 32 0.97 - - - 0.970 - - - - - kelch-like family member 36 [Source:ZFIN;Acc:ZDB-GENE-050522-324]
48. haao ENSDARG00000076487 143 0.966 - - - 0.966 - - - - - 3-hydroxyanthranilate 3,4-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-041114-89]
49. si:dkeyp-82a1.6 ENSDARG00000094336 228 0.963 - - - 0.963 - - - - - si:dkeyp-82a1.6 [Source:ZFIN;Acc:ZDB-GENE-081105-150]
50. zgc:172075 ENSDARG00000076146 93 0.963 - - - 0.963 - - - - - zgc:172075 [Source:ZFIN;Acc:ZDB-GENE-080215-3]
51. HAP1 HAP1 481 0.959 - - - 0.959 - - - - -
52. FNIP2 FNIP2 593 0.958 - - - 0.958 - - - - -
53. si:dkeyp-53d3.6 204 0.957 - - - 0.957 - - - - - si:dkeyp-53d3.6, transcript variant X1
54. f3a ENSDARG00000099124, ENSDARG00000110910, ENSDARG00000116919 115 0.957 - - - 0.957 - - - - - coagulation factor IIIa [Source:ZFIN;Acc:ZDB-GENE-071119-5]
55. trim109 ENSDARG00000062429 321 0.955 - - - 0.955 - - - - - tripartite motif containing 109 [Source:ZFIN;Acc:ZDB-GENE-060616-101]
56. gpr173 ENSDARG00000042922 238 0.954 - - - 0.954 - - - - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
57. pus7l_1 ENSDARG00000069780 49 0.953 - - - 0.953 - - - - - pseudouridylate synthase 7, like [Source:ZFIN;Acc:ZDB-GENE-050419-188]
58. josd2 ENSDARG00000057626, ENSDARG00000111978 273 0.953 - - - 0.953 - - - - - Josephin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-850]
59. si:ch211-199g17.2 ENSDARG00000092310 243 0.953 - - - 0.953 - - - - - si:ch211-199g17.2 [Source:ZFIN;Acc:ZDB-GENE-060503-396]
60. si:ch211-200p22.4 ENSDARG00000029170, ENSDARG00000110266 175 0.952 - - - 0.952 - - - - - si:ch211-200p22.4 [Source:ZFIN;Acc:ZDB-GENE-081104-61]
61. rbm41 ENSDARG00000054096 498 0.952 - - - 0.952 - - - - - RNA binding motif protein 41 [Source:ZFIN;Acc:ZDB-GENE-041114-107]
62. tatdn3 ENSDARG00000054076 130 0.952 - - - 0.952 - - - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
63. si:dkey-154b15.1 ENSDARG00000057010 85 0.951 - - - 0.951 - - - - - si:dkey-154b15.1 [Source:ZFIN;Acc:ZDB-GENE-060503-52]
64. mir124-6 64 0.951 - - - 0.951 - - - - - microRNA 124-6
65. tll1 ENSDARG00000037429, ENSDARG00000113847 1039 0.951 - - - 0.951 - - - - - tolloid-like 1 [Source:ZFIN;Acc:ZDB-GENE-041020-1]
66. polg2 ENSDARG00000074933 117 0.946 - - - 0.946 - - - - - polymerase (DNA directed), gamma 2, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060810-116]
67. ar ENSDARG00000067976, ENSDARG00000114287 192 0.945 - - - 0.945 - - - - - androgen receptor [Source:ZFIN;Acc:ZDB-GENE-060131-1]
68. WDR70 ENSDARG00000109022 265 0.943 - - - 0.943 - - - - - WD repeat domain 70 [Source:HGNC Symbol;Acc:HGNC:25495]
69. si:dkey-157e10.7 si:dkey-157e10.7 105 0.941 0.941 - - - - - - - -
70. FEZ2_1 FEZ2_1 153 0.941 - - - 0.941 - - - - -
71. plch2a ENSDARG00000059960 222 0.941 - - - 0.941 - - - - - phospholipase C, eta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6367]
72. bnip2 ENSDARG00000013397 206 0.94 - - - 0.940 - - - - - BCL2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-040109-6]
73. kcnj11 ENSDARG00000051880, ENSDARG00000114565 211 0.94 - - - 0.940 - - - - - potassium inwardly-rectifying channel, subfamily J, member 11 [Source:ZFIN;Acc:ZDB-GENE-060308-2]
74. adat3 ENSDARG00000005640 96 0.939 - - - 0.939 - - - - - adenosine deaminase, tRNA-specific 3 [Source:ZFIN;Acc:ZDB-GENE-030616-531]
75. tsen15 ENSDARG00000069280 240 0.939 - - - 0.939 - - - - - TSEN15 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-041008-211]
76. slmapb ENSDARG00000020764, ENSDARG00000117032 112 0.938 - - - 0.938 - - - - - sarcolemma associated protein b [Source:ZFIN;Acc:ZDB-GENE-040426-809]
77. appl1 1019 0.937 - - - 0.937 - - - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
78. fndc1 ENSDARG00000002847 178 0.937 - - - 0.937 - - - - - fibronectin type III domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-332]
79. ybey ENSDARG00000011999, ENSDARG00000110510 73 0.935 - - - 0.935 - - - - - ybeY metalloendoribonuclease [Source:ZFIN;Acc:ZDB-GENE-030131-437]
80. CABZ01032467.1 CABZ01032467.1 400 0.935 - - - 0.935 - - - - -
81. si:dkey-42p8.3 1117 0.935 - - - 0.935 - - - - - si:dkey-42p8.3, transcript variant X1
82. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 0.934 - - - 0.934 - - - - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
83. nudt14 ENSDARG00000062335, ENSDARG00000111320 294 0.934 - - - 0.934 - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 14 [Source:ZFIN;Acc:ZDB-GENE-041014-254]
84. gb:ai877918 ENSDARG00000100179 173 0.931 - - - 0.931 - - - - - expressed sequence AI877918 [Source:ZFIN;Acc:ZDB-GENE-090506-8]
85. BX470254.1_1 ENSDARG00000097402 50 0.931 - - - - - - 0.931 - -
86. stim2 stim2 278 0.929 - - - 0.929 - - - - -
87. CDPF1 ENSDARG00000095705 553 0.927 - - - - - - 0.927 - - cysteine rich DPF motif domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33710]
88. htr2cl1 ENSDARG00000018228, ENSDARG00000113913 131 0.926 - - - 0.926 - - - - - 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1 [Source:ZFIN;Acc:ZDB-GENE-081104-48]
89. hsd17b4 ENSDARG00000101239 301 0.923 - - - 0.923 - - - - - hydroxysteroid (17-beta) dehydrogenase 4 [Source:ZFIN;Acc:ZDB-GENE-040421-1]
90. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 0.921 - - - - - - 0.921 - - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
91. e4f1 ENSDARG00000038243 160 0.92 - - - 0.920 - - - - - E4F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050913-103]
92. nptnb ENSDARG00000043864 165 0.92 - - - 0.920 - - - - - neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821]
93. dcun1d4 ENSDARG00000092394 258 0.92 - - - 0.920 - - - - - DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-248]
94. dusp12 ENSDARG00000076330 173 0.919 - - - 0.919 - - - - - dual specificity phosphatase 12 [Source:ZFIN;Acc:ZDB-GENE-050626-91]
95. tbl2 ENSDARG00000043357 125 0.919 - - - 0.919 - - - - - transducin (beta)-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9012]
96. ECM1 ECM1 87 0.917 - - - 0.917 - - - - -
97. arhgap10 ENSDARG00000078326 994 0.914 - - - 0.914 - - - - - Rho GTPase activating protein 10 [Source:ZFIN;Acc:ZDB-GENE-060512-221]
98. APH1A APH1A 129 0.913 - - - 0.913 - - - - -
99. zgc:92630 ENSDARG00000004141, ENSDARG00000113420 147 0.91 - - - 0.910 - - - - - zgc:92630 [Source:ZFIN;Acc:ZDB-GENE-040718-449]
100. rfc5 ENSDARG00000035634 974 0.91 - - - - - - 0.910 - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]

There are 1095 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA