Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for 5S_rRNA_16

Gene Name Gene ID Reads Annotation
5S_rRNA_16 5S_rRNA_16 10










Genes with expression patterns similar to 5S_rRNA_16

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. 5S_rRNA_16 5S_rRNA_16 10 6 - 1.000 1.000 - 1.000 1.000 - 1.000 1.000
2. stoml2 ENSDARG00000103135 4 1.807 - - 1.000 - 0.807 - - - - stomatin (EPB72)-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1139]
3. stxbp4 ENSDARG00000076997 20 1.786 - 1.000 - - - - - - 0.786 syntaxin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-110420-5]
4. grid2ipb ENSDARG00000095603, ENSDARG00000111282 90 1.71 - 0.766 - - - 0.944 - - - glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, b [Source:ZFIN;Acc:ZDB-GENE-040724-161]
5. tshb tshb 7 1.709 - - 1.000 - - 0.709 - - -
6. zgc:174259 ENSDARG00000091136, ENSDARG00000115432 3 1.703 - 1.000 - - - - - - 0.703 zgc:174259 [Source:ZFIN;Acc:ZDB-GENE-080213-10]
7. si:busm1-266f07.2 ENSDARG00000031745 19 1.688 - 0.888 - - 0.800 - - - - si:busm1-266f07.2 [Source:ZFIN;Acc:ZDB-GENE-030616-436]
8. PEG3_29 PEG3_29 28 1.678 - 0.969 - - - 0.709 - - -
9. CR339057.1 CR339057.1 7 1.661 - 0.809 - - 0.852 - - - -
10. si:dkeyp-80c12.4 ENSDARG00000036479 7 1.656 - 0.947 - - - 0.709 - - - si:dkeyp-80c12.4 [Source:ZFIN;Acc:ZDB-GENE-090313-403]
11. stim1b ENSDARG00000061560 146 1.653 - 0.889 - - - 0.764 - - - stromal interaction molecule 1b [Source:ZFIN;Acc:ZDB-GENE-060531-4]
12. cyb561 ENSDARG00000038176 55 1.648 - 0.939 - - - 0.709 - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
13. soat1 ENSDARG00000062297 71 1.642 - 0.827 0.815 - - - - - - sterol O-acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-177]
14. CCDC83 ENSDARG00000077179 29 1.477 - - 0.744 - - 0.733 - - - coiled-coil domain containing 83 [Source:ZFIN;Acc:ZDB-GENE-130723-1]
15. akap1a ENSDARG00000089802 5 1.412 - - - - - 0.709 - - 0.703 A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
16. si:ch211-222m18.4 ENSDARG00000094425 7 1 - - - - - - - 1.000 - si:ch211-222m18.4 [Source:ZFIN;Acc:ZDB-GENE-050419-64]
17. si:ch211-197g15.5 si:ch211-197g15.5 10 1 - 1.000 - - - - - - -
18. 5S_rRNA_6 5S_rRNA_6 11 1 - 1.000 - - - - - - -
19. CABZ01024686.1 CABZ01024686.1 1 1 - - - - - - - 1.000 -
20. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1 - 1.000 - - - - - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
21. he1a 48624 1 - 1.000 - - - - - - - hatching enzyme 1a, transcript variant X1
22. nisch ENSDARG00000043077 11 1 - 1.000 - - - - - - - nischarin [Source:ZFIN;Acc:ZDB-GENE-050208-570]
23. ankrd34bb ENSDARG00000061641 23 1 - - - - - - - 1.000 - ankyrin repeat domain 34Bb [Source:ZFIN;Acc:ZDB-GENE-060526-101]
24. si:ch211-274k16.4 si:ch211-274k16.4 6 1 - - - - - - - 1.000 -
25. zgc:195175 ENSDARG00000069311, ENSDARG00000111510 1 1 - - - - - - - 1.000 - zgc:195175 [Source:ZFIN;Acc:ZDB-GENE-081022-191]
26. krt1-c5 ENSDARG00000026979 325 1 - 1.000 - - - - - - - keratin, type 1, gene c5 [Source:ZFIN;Acc:ZDB-GENE-060316-3]
27. si:ch211-147m20.1 si:ch211-147m20.1 6 1 - - - - - - - 1.000 -
28. NRP2 NRP2 5 1 - 1.000 - - - - - - -
29. PEG3_25 PEG3_25 0 1 - - - - - - - 1.000 -
30. FAM149A ENSDARG00000073709 7 1 - 1.000 - - - - - - - family with sequence similarity 149 member A [Source:ZFIN;Acc:ZDB-GENE-081107-36]
31. sox11a ENSDARG00000077811 25 1 - 1.000 - - - - - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
32. SCARNA14 SCARNA14 2 1 - - 1.000 - - - - - -
33. gsdf ENSDARG00000075301 6 1 - 1.000 - - - - - - - gonadal somatic cell derived factor [Source:ZFIN;Acc:ZDB-GENE-101029-3]
34. ABCC10 ENSDARG00000077988, ENSDARG00000111885, ENSDARG00000113210 81 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 10 [Source:ZFIN;Acc:ZDB-GENE-050517-24]
35. si:dkey-10p5.7 26 1 - - - - - 1.000 - - - si:dkey-10p5.7
36. si:dkey-42p8.3 1117 1 - 1.000 - - - - - - - si:dkey-42p8.3, transcript variant X1
37. wt1b ENSDARG00000007990 39 1 - 1.000 - - - - - - - wilms tumor 1b [Source:ZFIN;Acc:ZDB-GENE-050420-319]
38. si:dkey-199m13.2 si:dkey-199m13.2 31 1 - 1.000 - - - - - - -
39. b4galnt3a ENSDARG00000078749 3 1 - 1.000 - - - - - - - beta-1,4-N-acetyl-galactosaminyl transferase 3a [Source:ZFIN;Acc:ZDB-GENE-060503-519]
40. edn3b ENSDARG00000086669 8 1 - 1.000 - - - - - - - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
41. si:ch211-284e13.11 ENSDARG00000091997 3 1 - 1.000 - - - - - - - si:ch211-284e13.11 [Source:ZFIN;Acc:ZDB-GENE-060526-157]
42. zgc:112234_7 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 1 1 - - - - - - - 1.000 - zgc:112234 [Source:NCBI gene;Acc:554097]
43. si:dkey-88e10.2 si:dkey-88e10.2 7 1 - - - - - - - 1.000 -
44. tlr3 ENSDARG00000016065, ENSDARG00000117078 66 1 - 1.000 - - - - - - - toll-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-040219-7]
45. FGD5_1 FGD5_1 8 1 - 1.000 - - - - - - -
46. tbc1d22b ENSDARG00000026988 18 1 - 1.000 - - - - - - - TBC1 domain family, member 22B [Source:ZFIN;Acc:ZDB-GENE-091118-28]
47. radil ENSDARG00000079779 14 1 - 1.000 - - - - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
48. stoml3a ENSDARG00000079914 4 1 - - - - - - - 1.000 - stomatin (EPB72)-like 3a [Source:ZFIN;Acc:ZDB-GENE-070620-18]
49. myo1f ENSDARG00000078734 100 1 - 1.000 - - - - - - - myosin IF [Source:ZFIN;Acc:ZDB-GENE-081104-506]
50. si:dkey-199m13.5 ENSDARG00000098876 4 1 - 1.000 - - - - - - - si:dkey-199m13.5 [Source:ZFIN;Acc:ZDB-GENE-110913-174]
51. manba_1 ENSDARG00000008238 8 1 - - - - - - - 1.000 - mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721]
52. PEG3_19 PEG3_19 29 1 - - - - - - - 1.000 -
53. zgc:92161 ENSDARG00000101749 27 1 - 1.000 - - - - - - - zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
54. pgap1 ENSDARG00000062465 30 1 - 1.000 - - - - - - - post-GPI attachment to proteins 1 [Source:ZFIN;Acc:ZDB-GENE-090313-216]
55. PEG3_31 PEG3_31 6 1 - - - - - - - 1.000 -
56. EFEMP1_1 EFEMP1_1 8 1 - 1.000 - - - - - - -
57. card9 ENSDARG00000067672 33 1 - 1.000 - - - - - - - caspase recruitment domain family, member 9 [Source:ZFIN;Acc:ZDB-GENE-060531-94]
58. CHST7 ENSDARG00000044341 3 1 - 1.000 - - - - - - - carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 [Source:ZFIN;Acc:ZDB-GENE-131121-150]
59. psme1 ENSDARG00000002165, ENSDARG00000115834 72 1 - 1.000 - - - - - - - proteasome activator subunit 1 [Source:ZFIN;Acc:ZDB-GENE-991110-17]
60. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1 - 1.000 - - - - - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
61. park2 42 1 - 1.000 - - - - - - - parkin RBR E3 ubiquitin protein ligase
62. si:dkey-115f9.2 si:dkey-115f9.2 18 1 - - - - - - - 1.000 -
63. vtg1 ENSDARG00000092233 1 1 - - - - - - - 1.000 - vitellogenin 1 [Source:ZFIN;Acc:ZDB-GENE-001201-1]
64. si:dkey-270b7.4 si:dkey-270b7.4 11 1 - 1.000 - - - - - - -
65. mtcl1 ENSDARG00000091408 6 1 - 1.000 - - - - - - - microtubule crosslinking factor 1 [Source:ZFIN;Acc:ZDB-GENE-120508-3]
66. COL9A3 ENSDARG00000037845 1 1 - 1.000 - - - - - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
67. ENSDARG00000088134 ENSDARG00000088134 16 1 - 1.000 - - - - - - -
68. man2a1 ENSDARG00000102200 12 1 - 1.000 - - - - - - - mannosidase, alpha, class 2A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060526-31]
69. CABZ01030033.1 ENSDARG00000117613 3 1 - 1.000 - - - - - - -
70. KLHL29_1 KLHL29_1 158 1 - 1.000 - - - - - - -
71. Mar-03 Mar-03 44 1 - 1.000 - - - - - - -
72. CABZ01035647.1 CABZ01035647.1 5 1 - - - - - - - 1.000 -
73. SEC14L1 ENSDARG00000101792 4 1 - 1.000 - - - - - - - SEC14 like lipid binding 1 [Source:HGNC Symbol;Acc:HGNC:10698]
74. ihhb ENSDARG00000058815 31 1 - - - - - - - 1.000 - Indian hedgehog homolog b [Source:ZFIN;Acc:ZDB-GENE-980526-135]
75. si:ch1073-464p5.5 ENSDARG00000079544 5 1 - - 1.000 - - - - - - si:ch1073-464p5.5 [Source:ZFIN;Acc:ZDB-GENE-091116-35]
76. hamp2 hamp2 67 1 - 1.000 - - - - - - -
77. inpp5jb ENSDARG00000093359 4 1 - 1.000 - - - - - - - inositol polyphosphate-5-phosphatase Jb [Source:ZFIN;Acc:ZDB-GENE-081104-46]
78. evx2 ENSDARG00000059255 317 1 - 1.000 - - - - - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
79. PGBD4_1 PGBD4_1 1 1 - 1.000 - - - - - - -
80. SPTBN4 ENSDARG00000092624 6 1 - 1.000 - - - - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
81. zgc:165481 ENSDARG00000060092 95 1 - 1.000 - - - - - - - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
82. slc5a12 ENSDARG00000005004 15 1 - 1.000 - - - - - - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
83. si:ch211-220i18.4 ENSDARG00000030262 10 1 - - 1.000 - - - - - - si:ch211-220i18.4 [Source:ZFIN;Acc:ZDB-GENE-090312-151]
84. U6_19 U6_19 1 1 - 1.000 - - - - - - -
85. FBXL6 ENSDARG00000077227 28 1 - 1.000 - - - - - - - F-box and leucine-rich repeat protein 6 [Source:ZFIN;Acc:ZDB-GENE-060810-162]
86. smyd3 ENSDARG00000058050 69 1 - - - - - 1.000 - - - SET and MYND domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-051120-138]
87. si:dkey-69c19.1 si:dkey-69c19.1 37 1 - 1.000 - - - - - - -
88. si:dkey-14d8.7 ENSDARG00000045834 5 1 - - - - - - - 1.000 - si:dkey-14d8.7 [Source:ZFIN;Acc:ZDB-GENE-041210-143]
89. si:dkey-228i19.32 si:dkey-228i19.32 9 1 - 1.000 - - - - - - -
90. CABZ01053592.1 ENSDARG00000117388 6 1 - 1.000 - - - - - - -
91. plxnc1 ENSDARG00000015278 501 1 - 1.000 - - - - - - - plexin C1 [Source:ZFIN;Acc:ZDB-GENE-030131-1620]
92. TOX4 TOX4 0 1 - - - - - - - 1.000 -
93. gng2_1 ENSDARG00000056831 113 1 - 1.000 - - - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
94. CCDC18_1 CCDC18_1 3 1 - 1.000 - - - - - - -
95. cdca9 ENSDARG00000088639, ENSDARG00000113114 3 1 - 1.000 - - - - - - - cell division cycle associated 9 [Source:ZFIN;Acc:ZDB-GENE-090706-4]
96. slc44a1a ENSDARG00000015946 10 1 - 1.000 - - - - - - - solute carrier family 44 (choline transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050417-204]
97. si:ch211-59g22.1 si:ch211-59g22.1 0 1 - - - - - - - 1.000 -
98. zgc:173652 22 1 - 1.000 - - - - - - - zgc:173652
99. ccr12.3 ccr12.3 79 1 - 1.000 - - - - - - -
100. KCNJ3 KCNJ3 24 1 - 1.000 - - - - - - -

There are 684 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA