Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for 5S_rRNA_10

Gene Name Gene ID Reads Annotation
5S_rRNA_10 5S_rRNA_10 2










Genes with expression patterns similar to 5S_rRNA_10

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. 5S_rRNA_10 5S_rRNA_10 2 4 1.000 - 1.000 - - - 1.000 - 1.000
2. SOX8 SOX8 22 2 1.000 - - - - - 1.000 - -
3. sez6a ENSDARG00000100876 35 2 1.000 - 1.000 - - - - - - seizure related 6 homolog a [Source:ZFIN;Acc:ZDB-GENE-030131-8208]
4. si:ch211-160d14.9 8 2 1.000 - - - - - 1.000 - - si:ch211-160d14.9, transcript variant X1
5. nkd3_1 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 1 2 - - 1.000 - - - 1.000 - - naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]
6. F2RL3 ENSDARG00000079399 29 2 1.000 - - - - - 1.000 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
7. si:dkey-16j24.1 2 2 - - 1.000 - - - 1.000 - - si:dkey-16j24.1, transcript variant X1
8. si:ch211-202m22.1 ENSDARG00000094491 24 2 - - 1.000 - - - 1.000 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
9. si:ch73-95a24.1 si:ch73-95a24.1 11 2 - - - - - - 1.000 - 1.000
10. si:dkey-4p15.5 ENSDARG00000086272 7 2 - - 1.000 - - - 1.000 - - si:dkey-4p15.5 [Source:ZFIN;Acc:ZDB-GENE-121214-193]
11. CU695076.1 CU695076.1 7 2 1.000 - 1.000 - - - - - -
12. abhd10a ENSDARG00000076435 3 2 1.000 - 1.000 - - - - - - abhydrolase domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-060526-144]
13. si:dkey-177p2.15p si:dkey-177p2.15p 20 2 1.000 - 1.000 - - - - - -
14. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1.966 1.000 - - - - - 0.966 - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
15. CABZ01069081.1 CABZ01069081.1 16 1.906 1.000 - - - - - 0.906 - -
16. si:ch211-250m6.8 si:ch211-250m6.8 51 1.893 - - 0.893 - - - 1.000 - -
17. MUC5B_1 MUC5B_1 7 1.89 - - - - - - 1.000 - 0.890
18. cacnb2a ENSDARG00000099045 374 1.881 1.000 - - - - - 0.881 - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
19. MAP3K13 ENSDARG00000009493 8 1.855 1.000 - 0.855 - - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
20. EDN3 14 1.846 - - 0.846 - - - 1.000 - - endothelin 3
21. FAM177A1 ENSDARG00000079636 19 1.826 1.000 - 0.826 - - - - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
22. vipr1b ENSDARG00000059058 62 1.809 1.000 - - - - - 0.809 - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
23. ubxn10 ENSDARG00000052535 24 1.766 1.000 - - - - - 0.766 - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
24. ARHGAP17 ARHGAP17 29 1.764 1.000 - - - - - 0.764 - -
25. IGFN1_2 IGFN1_2 3 1.764 - - - - - - 0.764 - 1.000
26. si:dkey-217m5.3 si:dkey-217m5.3 22 1.748 1.000 - - - - - 0.748 - -
27. si:ch211-196n4.5 si:ch211-196n4.5 63 1.714 0.881 - - - - - 0.833 - -
28. CR352265.1 ENSDARG00000062758 39 1.707 - - 0.917 - - - 0.790 - -
29. atf1 ENSDARG00000044301, ENSDARG00000109865 2 1.702 - - 0.702 - - - - - 1.000 activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
30. CR936540.2 CR936540.2 4 1.692 - - 0.702 - - - - - 0.990
31. si:ch211-207c7.6 si:ch211-207c7.6 23 1.605 0.731 - - - - - 0.874 - -
32. CPNE7 ENSDARG00000102584 95 1.605 0.746 - - - - - 0.859 - - copine VII [Source:ZFIN;Acc:ZDB-GENE-131125-70]
33. slco5a1 slco5a1 383 1.452 0.717 - - - - - 0.735 - -
34. CR848763.1 CR848763.1 9 1 - - - - - - 1.000 - -
35. CR847543.1 ENSDARG00000086708 155 1 1.000 - - - - - - - -
36. clrn1 ENSDARG00000102890 5 1 - - - - - - 1.000 - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
37. si:ch211-128b10.4 si:ch211-128b10.4 3 1 - - - - - - - - 1.000
38. neurod6b ENSDARG00000020794 164 1 - - - - - - 1.000 - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
39. gper gper 4 1 - - - - - - 1.000 - -
40. oxtrl ENSDARG00000044175 10 1 - - - - - - 1.000 - - oxytocin receptor like [Source:ZFIN;Acc:ZDB-GENE-110805-1]
41. CR855327.1 CR855327.1 6 1 - - - - - - 1.000 - -
42. si:ch211-175f12.2 ENSDARG00000095831 1 1 - - - - - - 1.000 - - si:ch211-175f12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-220]
43. prokr1a ENSDARG00000074182 2 1 - - 1.000 - - - - - - prokineticin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-110411-180]
44. si:dkey-14i17.1 si:dkey-14i17.1 1 1 - - 1.000 - - - - - -
45. mgat3 mgat3 195 1 - - - - - - 1.000 - -
46. wbp4 ENSDARG00000068082 1 1 - - - - - - - - 1.000 WW domain binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-342]
47. si:dkeyp-34c12.1 ENSDARG00000071083, ENSDARG00000113229 6 1 - - 1.000 - - - - - - si:dkeyp-34c12.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5347]
48. si:ch211-181l5.5 si:ch211-181l5.5 0 1 - - 1.000 - - - - - -
49. BX119910.13 BX119910.13 4 1 - - 1.000 - - - - - -
50. coch ENSDARG00000024032 7 1 - - - - - - 1.000 - - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
51. abcg2a ENSDARG00000100075 2 1 - - 1.000 - - - - - - ATP-binding cassette, sub-family G (WHITE), member 2a [Source:ZFIN;Acc:ZDB-GENE-050517-35]
52. si:dkey-115f9.2 si:dkey-115f9.2 18 1 - - - - - - 1.000 - -
53. alkbh7 ENSDARG00000037906 9 1 - - - - - - 1.000 - - alkB homolog 7 [Source:ZFIN;Acc:ZDB-GENE-050417-78]
54. STRC ENSDARG00000105391 10 1 - - 1.000 - - - - - - stereocilin [Source:ZFIN;Acc:ZDB-GENE-160114-58]
55. zgc:171759_1 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 1 1 - - 1.000 - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
56. fn3krp ENSDARG00000098208 4 1 - - 1.000 - - - - - - fructosamine 3 kinase related protein [Source:ZFIN;Acc:ZDB-GENE-041010-192]
57. si:dkey-157e10.5 si:dkey-157e10.5 1 1 1.000 - - - - - - - -
58. PEG3_14 PEG3_14 2 1 - - 1.000 - - - - - -
59. TRMT10B ENSDARG00000060176 13 1 - - - - - - 1.000 - - tRNA methyltransferase 10B [Source:ZFIN;Acc:ZDB-GENE-061013-313]
60. gucy2f ENSDARG00000025504 6 1 - - - - - - 1.000 - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
61. ZNF70_7 ZNF70_7 0 1 - - 1.000 - - - - - -
62. si:ch211-113a14.17 15 1 - - - - - - 1.000 - - si:ch211-113a14.17
63. ralgps1 ENSDARG00000068370 39 1 - - 1.000 - - - - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
64. EVA1A ENSDARG00000061405 1 1 - - - - - - - - 1.000 eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
65. si:ch211-194e1.8 si:ch211-194e1.8 14 1 1.000 - - - - - - - -
66. GBE1_1 GBE1_1 1 1 - - - - - - 1.000 - -
67. CR376787.1 CR376787.1 10 1 - - - - - - 1.000 - -
68. si:dkey-27p18.6 4 1 - - - - - - 1.000 - - si:dkey-27p18.6, transcript variant X1
69. BX572103.3 BX572103.3 0 1 - - 1.000 - - - - - -
70. panx3 ENSDARG00000004627 7 1 - - 1.000 - - - - - - pannexin 3 [Source:ZFIN;Acc:ZDB-GENE-091204-114]
71. zgc:174356 ENSDARG00000088263, ENSDARG00000116818 6 1 - - - - - - 1.000 - - zgc:174356 [Source:ZFIN;Acc:ZDB-GENE-080215-21]
72. CR626874.1 ENSDARG00000100141 55 1 - - - - - - 1.000 - -
73. U1_7 U1_7 0 1 - - 1.000 - - - - - -
74. cdc14aa ENSDARG00000013858 18 1 1.000 - - - - - - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
75. si:ch211-287c22.3 si:ch211-287c22.3 1 1 - - - - - - 1.000 - -
76. vmhcl 119 1 1.000 - - - - - - - - ventricular myosin heavy chain-like
77. cx45.6 cx45.6 26 1 1.000 - - - - - - - -
78. Metazoa_SRP_21 Metazoa_SRP_21 1 1 - - - - - - 1.000 - -
79. RASAL1 0 1 - - 1.000 - - - - - - RAS protein activator like 1
80. myo7aa ENSDARG00000099871 23 1 - - - - - - 1.000 - - myosin VIIAa [Source:ZFIN;Acc:ZDB-GENE-020709-1]
81. asic2 ENSDARG00000006849 18 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
82. NMI 3 1 - - - - - - 1.000 - - N-myc (and STAT) interactor
83. cdca9 ENSDARG00000088639, ENSDARG00000113114 3 1 - - - - - - 1.000 - - cell division cycle associated 9 [Source:ZFIN;Acc:ZDB-GENE-090706-4]
84. socs7_1 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 1 1 - - - - - - - - 1.000 suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
85. gabra3 ENSDARG00000090883 0 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
86. BEGAIN_1 BEGAIN_1 7 1 - - 1.000 - - - - - -
87. ssh1b ENSDARG00000010031 4 1 1.000 - - - - - - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
88. asb13a.2 ENSDARG00000045765, ENSDARG00000109879 8 1 - - 1.000 - - - - - - ankyrin repeat and SOCS box containing 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041210-88]
89. EHD4 ENSDARG00000054302 46 1 1.000 - - - - - - - - EH-domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060810-22]
90. si:zfos-979f1.2 ENSDARG00000011652 24 1 1.000 - - - - - - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
91. CACNA2D1_1 ENSDARG00000073752 2 1 - - 1.000 - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
92. si:dkey-148a12.2 si:dkey-148a12.2 1 1 - - 1.000 - - - - - -
93. CT027800.1 CT027800.1 36 1 1.000 - - - - - - - -
94. FOLR1 FOLR1 25 1 - - - - - - 1.000 - -
95. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 1 1.000 - - - - - - - - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
96. gpr158 gpr158 52 1 - - - - - - 1.000 - -
97. BX571739.1 BX571739.1 45 1 1.000 - - - - - - - -
98. scn4bb ENSDARG00000060319, ENSDARG00000112427 63 1 1.000 - - - - - - - - sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]
99. mrc1b ENSDARG00000038822 73 1 1.000 - - - - - - - - mannose receptor, C type 1b [Source:ZFIN;Acc:ZDB-GENE-070705-13]
100. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - - 1.000 - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]

There are 900 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA