Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_whole_embryo1, section s21.

Sample reads: 133,412. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 25017.40 187520.57
2. apoc1l apoc1l 2240.03 16790.38
3. apobb apobb 2186.22 16387.04
4. apoa2 ENSDARG00000015866 1840.40 13794.91 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
5. tmsb4x ENSDARG00000077777 1667.49 12498.85 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
6. krt4 ENSDARG00000017624, ENSDARG00000115790 1573.22 11792.24 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
7. apoa1b ENSDARG00000101324 1396.17 10465.14 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
8. mt-co2 ENSDARG00000063908 1280.28 9596.47 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
9. hbbe3 ENSDARG00000038147, ENSDARG00000109344 1245.79 9337.95 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
10. hbae3 ENSDARG00000079305 1226.47 9193.14 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
11. hbbe1.1 ENSDARG00000113599 885.25 6635.48 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
12. apoa1a ENSDARG00000012076, ENSDARG00000110395 849.84 6370.07 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
13. si:dkey-151g10.6 si:dkey-151g10.6 813.51 6097.75
14. actb2 ENSDARG00000037870 679.23 5091.24 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
15. bhmt ENSDARG00000013430 651.18 4880.99 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
16. zgc:161979_1 zgc:161979_1 644.28 4829.27
17. apoeb ENSDARG00000040295 624.96 4684.45 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
18. eef1a1l1 ENSDARG00000020850 613.01 4594.88 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
19. mt-co3 ENSDARG00000063912 573.92 4301.88 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
20. apoa4 apoa4 552.30 4139.82
21. pvalb2 ENSDARG00000002768, ENSDARG00000114085 535.75 4015.77 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
22. mt-atp6 ENSDARG00000063911 514.59 3857.16 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
23. zgc:112425 zgc:112425 507.24 3802.07
24. ptmab ENSDARG00000101766 504.94 3784.83 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
25. ppiaa ENSDARG00000009212 484.24 3629.67 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
26. zgc:161979 zgc:161979 479.18 3591.74
27. mt-nd4 ENSDARG00000063917 447.45 3353.91 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
28. hbae1_1 444.23 3329.77 hemoglobin, alpha embryonic 1
29. hbbe1.1_1 ENSDARG00000113599 442.40 3316.06 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
30. tpma ENSDARG00000033683 421.70 3160.90 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
31. mt-cyb ENSDARG00000063924 417.56 3129.87 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
32. ckma ENSDARG00000035327, ENSDARG00000114671 412.04 3088.49 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
33. mt-nd2 ENSDARG00000063899 393.65 2950.65 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
34. AL935210.1 ENSDARG00000088330 385.83 2892.03 hemoglobin, alpha embryonic 1.3 [Source:NCBI gene;Acc:572729]
35. hmga1a ENSDARG00000028335 384.91 2885.13 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
36. actb1 ENSDARG00000037746, ENSDARG00000113649 346.28 2595.58 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
37. hspa8 ENSDARG00000068992, ENSDARG00000114726 337.08 2526.62 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
38. zgc:153129 zgc:153129 336.63 2523.25
39. rpl23 ENSDARG00000053457 326.97 2450.84 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
40. slc43a2b ENSDARG00000061120, ENSDARG00000117188 295.70 2216.45 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
41. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 287.88 2157.83 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
42. apoc2 ENSDARG00000092155 276.38 2071.64 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
43. ctsla ENSDARG00000007836 274.08 2054.40 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
44. eef2b ENSDARG00000100371, ENSDARG00000109247 258.91 1940.69 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
45. hmgn2 ENSDARG00000099572 250.63 1878.62 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
46. tfa ENSDARG00000016771 243.73 1826.90 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
47. mt-nd1 ENSDARG00000063895 242.35 1816.56 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
48. pla2g12b ENSDARG00000015662 240.05 1799.32 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
49. mt-co1 ENSDARG00000063905 235.91 1768.29 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
50. rpl10a ENSDARG00000042905, ENSDARG00000115649 233.61 1751.05 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
51. hsp90ab1 ENSDARG00000029150 231.31 1733.81 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
52. rps20 ENSDARG00000036044 228.10 1709.75 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
53. rpl11 ENSDARG00000043509 222.58 1668.37 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
54. AL954137.2 ENSDARG00000114408 222.12 1664.92
55. rpl36a ENSDARG00000058105, ENSDARG00000112656 216.14 1620.10 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
56. gamt ENSDARG00000070844, ENSDARG00000109945 212.92 1595.96 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
57. pnrc2 ENSDARG00000053291, ENSDARG00000112537 206.48 1547.69 proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
58. zgc:92533 zgc:92533 201.88 1513.21
59. ckmb ENSDARG00000040565 200.96 1506.32 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
60. si:dkey-150i13.2 ENSDARG00000071052 198.20 1485.63 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
61. btf3 ENSDARG00000035400, ENSDARG00000116462 194.98 1461.49 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
62. rps23 ENSDARG00000021838 190.85 1430.54 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
63. APOB APOB 190.39 1427.09
64. pvalb9 ENSDARG00000071601, ENSDARG00000113946 189.93 1423.64 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
65. pvalb1 ENSDARG00000037789 189.47 1420.19 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
66. si:ch211-226o13.2 188.55 1413.30 si:ch211-226o13.2
67. rps15 ENSDARG00000070849, ENSDARG00000110979 187.63 1406.40 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
68. si:busm1-118j2.5 si:busm1-118j2.5 183.03 1371.92
69. rpl8 ENSDARG00000014867 181.65 1361.58 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
70. id1 ENSDARG00000040764 179.81 1347.78 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
71. cirbp cirbp 176.59 1323.65
72. rpl9 ENSDARG00000037350, ENSDARG00000112384 176.59 1323.65 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
73. si:dkeyp-86f7.3 si:dkeyp-86f7.3 175.21 1313.31
74. rpl26 ENSDARG00000102317 174.75 1309.86 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
75. rps27a ENSDARG00000032725, ENSDARG00000114059 174.29 1306.41 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
76. atp2a1 ENSDARG00000020574 173.83 1302.96 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
77. cfl1 ENSDARG00000021124 168.77 1265.03 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
78. rps9 ENSDARG00000011405, ENSDARG00000113248 166.93 1251.24 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
79. eif5a ENSDARG00000017235 166.01 1244.35 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
80. rpl27 ENSDARG00000015128 163.71 1227.11 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
81. rpl18a ENSDARG00000025073 162.79 1220.21 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
82. rps2 ENSDARG00000077291 162.79 1220.21 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
83. rps12 ENSDARG00000036875, ENSDARG00000115157 160.95 1206.42 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
84. rpl36 ENSDARG00000100588 159.12 1192.70 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
85. rps15a ENSDARG00000010160 159.12 1192.70 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
86. fth1a ENSDARG00000015551 157.74 1182.36 ferritin, heavy polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-000831-2]
87. rplp2 ENSDARG00000101406 157.74 1182.36 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
88. h3f3a 155.44 1165.12 H3 histone, family 3A, transcript variant X1
89. rpl21 ENSDARG00000010516, ENSDARG00000110263 154.98 1161.67 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
90. rps26l ENSDARG00000030408 150.84 1130.64 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
91. icn ENSDARG00000009978 150.38 1127.19 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
92. hnrnpab hnrnpab 149.46 1120.29
93. rplp1 ENSDARG00000021864 149.46 1120.29 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
94. slc43a2a ENSDARG00000036848 149.46 1120.29 solute carrier family 43 (amino acid system L transporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-040426-964]
95. rps14 ENSDARG00000036629 148.54 1113.40 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
96. khdrbs1a ENSDARG00000052856 147.62 1106.50 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
97. faua ENSDARG00000099022 146.24 1096.16 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
98. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 142.10 1065.13 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
99. slc4a1a ENSDARG00000012881 141.64 1061.68 solute carrier family 4 (anion exchanger), member 1a (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-010525-1]
100. sepp1a 141.18 1058.23 selenoprotein P, plasma, 1a
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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