Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_trunk2, section s2.

Sample reads: 133,400. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 16069.56 120461.02
2. tpma ENSDARG00000033683 4312.40 32326.72 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
3. ckmb ENSDARG00000040565 2781.03 20847.22 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
4. pvalb2 ENSDARG00000002768, ENSDARG00000114085 1874.26 14049.87 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
5. mt-atp6 ENSDARG00000063911 1825.34 13683.16 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
6. krt4 ENSDARG00000017624, ENSDARG00000115790 1790.33 13420.71 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
7. mylz3 ENSDARG00000017441 1727.91 12952.80 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
8. mt-nd2 ENSDARG00000063899 1660.43 12446.95 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
9. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 1526.32 11441.64 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
10. ckma ENSDARG00000035327, ENSDARG00000114671 1494.69 11204.53 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
11. mt-co2 ENSDARG00000063908 1484.56 11128.59 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
12. mt-nd4 ENSDARG00000063917 1366.05 10240.22 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
13. tnnc2 ENSDARG00000070835, ENSDARG00000111155 1294.35 9702.74 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
14. mt-co3 ENSDARG00000063912 1262.72 9465.63 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
15. atp2a1 ENSDARG00000020574 1108.36 8308.51 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
16. acta1b ENSDARG00000055618 1023.17 7669.91 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
17. mt-cyb ENSDARG00000063924 962.01 7211.44 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
18. mt-nd1 ENSDARG00000063895 863.75 6474.86 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
19. myhz1.3 ENSDARG00000067997 860.79 6452.67 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
20. pvalb1 ENSDARG00000037789 774.76 5807.77 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
21. eef1a1l1 ENSDARG00000020850 746.50 5595.93 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
22. si:dkey-151g10.6 si:dkey-151g10.6 723.72 5425.17
23. tnni2a.4 ENSDARG00000029069 719.93 5396.76 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
24. actc1b ENSDARG00000099197 713.60 5349.31 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
25. ppiaa ENSDARG00000009212 672.27 5039.49 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
26. tnnt3a ENSDARG00000030270 660.04 4947.81 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
27. hmga1a ENSDARG00000028335 636.84 4773.90 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
28. zgc:112425 zgc:112425 592.56 4441.96
29. tnnt3b ENSDARG00000068457 571.05 4280.72 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
30. rpl10a ENSDARG00000042905, ENSDARG00000115649 559.66 4195.34 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
31. mylpfb ENSDARG00000002589 490.50 3676.90 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
32. ptmab ENSDARG00000101766 483.33 3623.15 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
33. acta1a ENSDARG00000036371 466.03 3493.47 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
34. actb2 ENSDARG00000037870 465.19 3487.17 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
35. si:ch211-226o13.2 462.66 3468.20 si:ch211-226o13.2
36. tmsb4x ENSDARG00000077777 445.79 3341.74 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
37. mt-co1 ENSDARG00000063905 445.37 3338.59 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
38. aldoab ENSDARG00000034470 431.45 3234.25 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
39. myl1 ENSDARG00000014196 428.08 3208.98 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
40. rpl23 ENSDARG00000053457 400.66 3003.44 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
41. actb1 ENSDARG00000037746, ENSDARG00000113649 387.59 2905.46 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
42. hmgn2 ENSDARG00000099572 387.59 2905.46 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
43. myhz2 ENSDARG00000012944 371.98 2788.45 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
44. rpl8 ENSDARG00000014867 362.71 2718.96 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
45. hspa8 ENSDARG00000068992, ENSDARG00000114726 348.37 2611.46 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
46. rpl21 ENSDARG00000010516, ENSDARG00000110263 346.26 2595.64 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
47. gapdh ENSDARG00000043457 343.31 2573.53 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
48. rpl18a ENSDARG00000025073 343.31 2573.53 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
49. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 336.14 2519.78 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
50. btf3 ENSDARG00000035400, ENSDARG00000116462 332.76 2494.44 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
51. AL954137.2 ENSDARG00000114408 315.89 2367.98
52. rps23 ENSDARG00000021838 315.47 2364.83 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
53. rpl11 ENSDARG00000043509 307.03 2301.57 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
54. zgc:66286 zgc:66286 306.61 2298.42
55. nme2b.2 ENSDARG00000099420 302.82 2270.01 NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
56. rps27a ENSDARG00000032725, ENSDARG00000114059 301.97 2263.63 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
57. rpl26 ENSDARG00000102317 299.86 2247.82 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
58. fabp3 ENSDARG00000023290 284.26 2130.88 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
59. rpl27 ENSDARG00000015128 282.57 2118.21 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
60. rps14 ENSDARG00000036629 270.76 2029.68 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
61. eif5a ENSDARG00000017235 270.34 2026.53 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
62. rpl36a ENSDARG00000058105, ENSDARG00000112656 269.92 2023.38 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
63. myl10 ENSDARG00000062592 269.50 2020.23 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
64. rpl9 ENSDARG00000037350, ENSDARG00000112384 263.59 1975.93 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
65. rps26l ENSDARG00000030408 256.85 1925.41 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
66. tpm3 ENSDARG00000005162 256.42 1922.18 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
67. ttna ttna 253.89 1903.22
68. rpl19 ENSDARG00000013307 239.55 1795.72 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
69. rps9 ENSDARG00000011405, ENSDARG00000113248 229.01 1716.71 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
70. rpl7 ENSDARG00000007320 225.64 1691.45 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
71. rps2 ENSDARG00000077291 224.79 1685.08 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
72. eef2b ENSDARG00000100371, ENSDARG00000109247 223.95 1678.78 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
73. rpl18 ENSDARG00000029533 218.47 1637.70 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
74. rplp1 ENSDARG00000021864 217.62 1631.33 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
75. mt-nd3 ENSDARG00000063914 217.20 1628.18 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
76. rps20 ENSDARG00000036044 211.72 1587.10 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
77. rpl36 ENSDARG00000100588 210.03 1574.43 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
78. si:dkeyp-86f7.3 si:dkeyp-86f7.3 206.24 1546.02
79. rps15 ENSDARG00000070849, ENSDARG00000110979 202.86 1520.68 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
80. rps27.1 ENSDARG00000023298 201.60 1511.24 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
81. rplp2 ENSDARG00000101406 198.22 1485.90 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
82. ttnb ttnb 196.11 1470.08
83. fkbp1aa ENSDARG00000022684 194.01 1454.34 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
84. rpl5b ENSDARG00000015862, ENSDARG00000109661 193.58 1451.12 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
85. rplp2l ENSDARG00000011201 192.74 1444.82 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
86. pkmb ENSDARG00000099860 191.90 1438.53 pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
87. rpl6 ENSDARG00000058451 185.57 1391.07 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
88. rpl15 ENSDARG00000009285 182.20 1365.81 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
89. rpsa ENSDARG00000019181 178.82 1340.47 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
90. ak1 ENSDARG00000001950 178.40 1337.33 adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
91. rps12 ENSDARG00000036875, ENSDARG00000115157 177.56 1331.03 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
92. cfl1 ENSDARG00000021124 176.29 1321.51 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
93. ATP5B 175.45 1315.21 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
94. rps6 ENSDARG00000019778 175.45 1315.21 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
95. RPL29 ENSDARG00000077717 173.76 1302.54 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
96. rps19 ENSDARG00000030602 172.92 1296.25 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
97. rps4x ENSDARG00000014690 170.81 1280.43 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
98. cirbp cirbp 170.39 1277.28
99. hsp90ab1 ENSDARG00000029150 169.97 1274.13 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
100. rps5 ENSDARG00000043453 165.75 1242.50 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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