Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s50.

Sample reads: 133,407. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 4734.26 35487.30 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. tpma ENSDARG00000033683 3649.10 27353.11 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
3. AC024175.4 AC024175.4 2053.29 15391.15
4. mt-co2 ENSDARG00000063908 1856.47 13915.82 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. mt-nd4 ENSDARG00000063917 1821.89 13656.61 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
6. ckmb ENSDARG00000040565 1766.04 13237.97 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
7. mt-nd2 ENSDARG00000063899 1587.84 11902.21 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
8. ckma ENSDARG00000035327, ENSDARG00000114671 1433.58 10745.90 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
9. tmsb4x ENSDARG00000077777 1428.26 10706.02 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
10. zgc:161979 zgc:161979 1305.91 9788.91
11. actc1b ENSDARG00000099197 1175.59 8812.05 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
12. zgc:161979_1 zgc:161979_1 1154.31 8652.53
13. apoa2 ENSDARG00000015866 1148.99 8612.66 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
14. apobb apobb 1138.35 8532.90
15. atp2a1 ENSDARG00000020574 1135.69 8512.96 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
16. mt-atp6 ENSDARG00000063911 1026.64 7695.54 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
17. si:dkey-151g10.6 si:dkey-151g10.6 957.49 7177.20
18. mt-co3 ENSDARG00000063912 914.94 6858.25 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
19. apoa1b ENSDARG00000101324 898.98 6738.62 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
20. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 864.40 6479.41 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
21. mt-nd1 ENSDARG00000063895 837.80 6280.02 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
22. rps26l ENSDARG00000030408 829.83 6220.28 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
23. actb2 ENSDARG00000037870 819.19 6140.53 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
24. aldoab ENSDARG00000034470 789.93 5921.20 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
25. apoeb ENSDARG00000040295 784.61 5881.32 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
26. apoc1l apoc1l 776.63 5821.50
27. myhz1.3 ENSDARG00000067997 776.63 5821.50 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
28. tnnc2 ENSDARG00000070835, ENSDARG00000111155 765.99 5741.75 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
29. ppiaa ENSDARG00000009212 688.86 5163.59 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
30. rpl36 ENSDARG00000100588 633.01 4744.95 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
31. pvalb2 ENSDARG00000002768, ENSDARG00000114085 617.05 4625.31 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
32. eef1a1l1 ENSDARG00000020850 587.79 4405.99 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
33. eef2b ENSDARG00000100371, ENSDARG00000109247 558.54 4186.73 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
34. rpl18a ENSDARG00000025073 526.62 3947.46 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
35. mt-cyb ENSDARG00000063924 515.98 3867.71 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
36. rpl10a ENSDARG00000042905, ENSDARG00000115649 486.72 3648.38 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
37. apoa1a ENSDARG00000012076, ENSDARG00000110395 484.06 3628.44 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
38. myl10 ENSDARG00000062592 476.09 3568.70 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
39. rps23 ENSDARG00000021838 476.09 3568.70 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
40. zgc:112425 zgc:112425 476.09 3568.70
41. apoa4 apoa4 441.51 3309.49
42. RPL29 ENSDARG00000077717 438.85 3289.55 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
43. rpl26 ENSDARG00000102317 425.55 3189.86 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
44. zgc:66286 zgc:66286 422.89 3169.92
45. acta1a ENSDARG00000036371 420.23 3149.98 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
46. tnni2a.4 ENSDARG00000029069 420.23 3149.98 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
47. fabp3 ENSDARG00000023290 412.25 3090.16 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
48. rps9 ENSDARG00000011405, ENSDARG00000113248 404.27 3030.35 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
49. rps27a ENSDARG00000032725, ENSDARG00000114059 372.36 2791.15 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
50. rpl19 ENSDARG00000013307 364.38 2731.34 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
51. rpl39 ENSDARG00000036316, ENSDARG00000117167 356.40 2671.52 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
52. rps20 ENSDARG00000036044 356.40 2671.52 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
53. tnnt3b ENSDARG00000068457 343.10 2571.83 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
54. hmga1a ENSDARG00000028335 340.44 2551.89 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
55. rpl9 ENSDARG00000037350, ENSDARG00000112384 335.12 2512.01 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
56. rpl27 ENSDARG00000015128 329.80 2472.13 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
57. rps14 ENSDARG00000036629 324.48 2432.25 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
58. si:ch211-226o13.2 324.48 2432.25 si:ch211-226o13.2
59. rpl21 ENSDARG00000010516, ENSDARG00000110263 319.16 2392.38 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
60. acta1b ENSDARG00000055618 305.87 2292.76 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
61. actb1 ENSDARG00000037746, ENSDARG00000113649 295.23 2213.00 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
62. mylz3 ENSDARG00000017441 295.23 2213.00 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
63. rps15 ENSDARG00000070849, ENSDARG00000110979 292.57 2193.06 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
64. cyt1l ENSDARG00000036832 284.59 2133.24 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
65. hspa8 ENSDARG00000068992, ENSDARG00000114726 284.59 2133.24 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
66. rpl8 ENSDARG00000014867 281.93 2113.31 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
67. tnnt3a ENSDARG00000030270 281.93 2113.31 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
68. rpl23 ENSDARG00000053457 279.27 2093.37 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
69. smyhc1 ENSDARG00000099959, ENSDARG00000115916 271.29 2033.55 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
70. myhz2 ENSDARG00000012944 268.63 2013.61 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
71. eif5a ENSDARG00000017235 263.31 1973.73 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
72. ttna ttna 260.65 1953.79
73. rpl14 ENSDARG00000103433 252.67 1893.98 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
74. rpl31 ENSDARG00000053365 252.67 1893.98 ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
75. rps27.1 ENSDARG00000023298 250.01 1874.04 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
76. cox4i1 ENSDARG00000032970 247.35 1854.10 cytochrome c oxidase subunit 4I1 [Source:ZFIN;Acc:ZDB-GENE-030131-5175]
77. atp5g3b 242.03 1814.22 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
78. rpl36a ENSDARG00000058105, ENSDARG00000112656 242.03 1814.22 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
79. rps15a ENSDARG00000010160 242.03 1814.22 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
80. zgc:92533 zgc:92533 242.03 1814.22
81. faua ENSDARG00000099022 239.37 1794.28 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
82. rbp4 ENSDARG00000101199 239.37 1794.28 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
83. rbfox1l ENSDARG00000021184, ENSDARG00000111700 236.71 1774.34 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
84. cfl1l ENSDARG00000012972 234.05 1754.40 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
85. rpl22 ENSDARG00000070437 231.39 1734.46 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
86. myl1 ENSDARG00000014196 228.73 1714.53 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
87. rpl30 ENSDARG00000035871, ENSDARG00000109253 228.73 1714.53 ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
88. COX5B_1 ENSDARG00000015978 226.07 1694.59 cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
89. tnni2b.1 ENSDARG00000035958 226.07 1694.59 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
90. bhmt ENSDARG00000013430 223.41 1674.65 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
91. rps6 ENSDARG00000019778 220.75 1654.71 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
92. zgc:113413 zgc:113413 220.75 1654.71
93. RPL37A RPL37A 215.44 1614.91
94. rpl6 ENSDARG00000058451 215.44 1614.91 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
95. rps29 ENSDARG00000041232 212.78 1594.97 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
96. fabp2 ENSDARG00000006427, ENSDARG00000110230 210.12 1575.03 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
97. btf3 ENSDARG00000035400, ENSDARG00000116462 207.46 1555.09 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
98. hsp90aa1.1 ENSDARG00000010478 204.80 1535.15 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
99. rps13 ENSDARG00000036298, ENSDARG00000112818 204.80 1535.15 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
100. zgc:153129 zgc:153129 204.80 1535.15
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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